RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Scyl2Q8CFE4 930 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Calml4Q91WQ9 153 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Hdac6Q9Z2V5 1149 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 1700016G14RikA0A286YCZ6 238 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Etnk2A7MCT6 385 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Trim43aQ3TL54 445 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Cep104Q80V31 926 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Ccdc50Q810U5 305 aaKnown RBP12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Aldh5a1Q8BWF0 523 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Tmem60Q8K174 133 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Tbx22Q8K402 517 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Cdca7Q9D0M2 382 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Gm7168A0AUV4 508 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Art2bO35975 289 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Man1a2P39098 641 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Cacna2d4Q5RJF7 1116 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Ctage5Q8R311 779 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Lztr1Q9CQ33 837 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 ThegQ9JMB1 375 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Acot3Q9QYR7 432 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Entpd5Q9WUZ9 427 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Tmem2Q5FWI3 1383 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 JcadQ5DTX6 1320 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Skor2A7M7C7 1008 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 MlxipQ2VPU4 917 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Kctd3Q8BFX3 815 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Nop53Q8BK35 484 aaKnown RBP12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Gucy1a3Q9ERL9 691 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Abhd2Q9QXM0 425 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Gm7356A0A087WSA6 508 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 E9QMW4 1145 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Rhpn1Q61085 643 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Shc3Q61120 474 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Mettl13Q91YR5 698 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Pik3c2bE9QAN8 1632 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 March10E9PX79 788 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Lrrc32G3XA59 663 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Copb2O55029 905 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Il27raO70394 623 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Mars2Q499X9 586 aaKnown RBP12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Sdccag8Q80UF4 717 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Slc4a8Q8JZR6 1089 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Tbc1d23Q8K0F1 684 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Q8K2W9 541 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 ArpinQ9D0A3 226 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Pramef12Q9D2F1 463 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Tob2Q9JM55 345 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Scgb2b11A0A087WR49 112 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Trappc10Q3TLI0 1259 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Tmtc2Q56A06 836 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Npdc1Q64322 332 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Ttll4Q80UG8 1193 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Susd4Q8BH32 490 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Ccdc40Q8BI79 1192 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Trim9Q8C7M3 817 aa12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Eef1gQ9D8N0 437 aaKnown RBP12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Pacsin2Q9WVE8 486 aaKnown RBP12.44□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Abcc10Q8R4P9 1501 aa12.43□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Ulk4Q3V129 1303 aa12.43□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Krt8P11679 490 aaKnown RBP12.43□□□□□ -0.42
Topbp1-201ENSMUST00000035164 TwistnbQ78WZ7 330 aaKnown RBP12.43□□□□□ -0.42
Topbp1-201ENSMUST00000035164 E330017A01RikQ8BU47 192 aa12.43□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Proser2Q8C5R2 471 aa12.43□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Cdan1Q8CC12 1239 aa12.43□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Enox2Q8R0Z2 598 aa12.43□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Zmynd10Q99ML0 440 aa12.43□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Tfap4Q9JIZ5 338 aa12.43□□□□□ -0.42
Topbp1-201ENSMUST00000035164 SufuQ9Z0P7 484 aa12.43□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Prr5lA2AVJ5 370 aa12.43□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Cetn3O35648 167 aa12.43□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Znf496Q5SXI5 585 aa12.43□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Ccna1Q61456 421 aa12.43□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Alg1Q921Q3 482 aa12.43□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Mss51Q9D5Z5 446 aa12.43□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Pbx1P41778 430 aa12.43□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Nhej1Q3KNJ2 295 aa12.43□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Ccdc38Q8CDN8 563 aa12.43□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Prpf6Q91YR7 941 aaKnown RBP12.43□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Ssfa2Q922B9 1252 aa12.43□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Cxcl11Q9JHH5 100 aa12.43□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Mms22lB1AUR6 1238 aa12.43□□□□□ -0.42
Topbp1-201ENSMUST00000035164 GabrdP22933 449 aa12.43□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Fam183bQ5NC57 135 aa12.43□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Adck2Q6NSR3 617 aa12.43□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Dbndd1Q9CZ00 160 aa12.43□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Rpf2Q9JJ80 306 aaKnown RBP12.43□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Pex11aQ9Z211 246 aa12.43□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Slc38a10Q5I012 1090 aa12.42□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Krt12Q64291 487 aa12.42□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Stox1B2RQL2 990 aa12.42□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Myo1eE9Q634 1107 aa12.42□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Serpinb6eI7HJI3 429 aa12.42□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Myo1fP70248 1099 aa12.42□□□□□ -0.42
Topbp1-201ENSMUST00000035164 GartQ64737 1010 aa12.42□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Adam6bQ6IMH7 756 aa12.42□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Tlr13Q6R5N8 991 aa12.42□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Klc3Q91W40 508 aa12.42□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Cep19Q9CQA8 163 aa12.42□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Dnajc7Q9QYI3 494 aa12.42□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Akr1b1P45376 316 aa12.42□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 62.3 ms