RNA–Protein interactions for RNA: ENSMUST00000020163.6

Nedd1-201, Transcript of Protein NEDD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nedd1, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd1-201ENSMUST00000020163 Fam133bQ9CVI2 245 aaKnown RBP10.96□□□□□ -0.65
Nedd1-201ENSMUST00000020163 Cul5Q9D5V5 780 aa10.96□□□□□ -0.65
Nedd1-201ENSMUST00000020163 Cul1Q9WTX6 776 aa10.96□□□□□ -0.65
Nedd1-201ENSMUST00000020163 Tnrc6cQ3UHC0 1690 aaKnown RBP10.96□□□□□ -0.65
Nedd1-201ENSMUST00000020163 Greb1lB9EJV3 1913 aa10.96□□□□□ -0.65
Nedd1-201ENSMUST00000020163 Dennd3A2RT67 1274 aa10.96□□□□□ -0.65
Nedd1-201ENSMUST00000020163 Slc4a4O88343 1079 aa10.96□□□□□ -0.65
Nedd1-201ENSMUST00000020163 M6prP24668 278 aa10.96□□□□□ -0.65
Nedd1-201ENSMUST00000020163 RxrbP28704 520 aa10.96□□□□□ -0.65
Nedd1-201ENSMUST00000020163 Ighmbp2P40694 993 aa10.96□□□□□ -0.65
Nedd1-201ENSMUST00000020163 Stat4P42228 749 aa10.96□□□□□ -0.65
Nedd1-201ENSMUST00000020163 Slc13a4Q8BZ82 625 aa10.96□□□□□ -0.65
Nedd1-201ENSMUST00000020163 Cwf19l1Q8CI33 537 aa10.96□□□□□ -0.65
Nedd1-201ENSMUST00000020163 PccaQ91ZA3 724 aa10.96□□□□□ -0.65
Nedd1-201ENSMUST00000020163 Fam50bQ9WTJ8 334 aa10.96□□□□□ -0.65
Nedd1-201ENSMUST00000020163 Tjp2Q9Z0U1 1167 aaKnown RBP10.96□□□□□ -0.65
Nedd1-201ENSMUST00000020163 Trappc11B2RXC1 1133 aa10.96□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Ncf2O70145 525 aa10.96□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Ercc5P35689 1170 aa10.96□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Tmod1P49813 359 aa10.96□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Abi2P62484 446 aa10.96□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Pfkfb2P70265 519 aa10.96□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Ankrd13cQ3UX43 541 aa10.96□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Zranb3Q6NZP1 1069 aa10.96□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Naa25Q8BWZ3 972 aa10.96□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Fam193aQ8CGI1 1231 aaKnown RBP10.96□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Pkn3Q8K045 878 aa10.96□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Spata17Q9D552 379 aa10.96□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Itga9B8JK39 1036 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Gucy1a2F8VQK3 730 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Calm1P0DP26 149 aaKnown RBP10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Calm2P0DP27 149 aaKnown RBP10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Calm3P0DP28 149 aaKnown RBP10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Lmnb2P21619 596 aaKnown RBP10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Cyp19a1P28649 503 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Nr5a1P33242 462 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Asap3Q5U464 904 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Mapk6Q61532 720 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Tarsl2Q8BLY2 790 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Usp38Q8BW70 1042 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 RadxQ8C779 850 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Lsm14bQ8CGC4 385 aaKnown RBP10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Mettl13Q91YR5 698 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Rhobtb3Q9CTN4 611 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Slfn8B1ARD8 910 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 VimP20152 466 aaKnown RBP10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Fam207aP58468 219 aaKnown RBP10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Igflr1Q3U4N7 345 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Rgl2Q61193 778 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Phc1Q64028 1012 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Tor1aip1Q921T2 595 aaKnown RBP10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Phf2Q9WTU0 1096 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Cog1Q9Z160 980 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Myh3P13541 1940 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Arhgap33Q80YF9 1305 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 ErmardE9Q048 622 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Krt78E9Q0F0 1068 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Ctnna1P26231 906 aaKnown RBP10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Ptprn2P80560 1001 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Kctd16Q5DTY9 427 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Cacna2d4Q5RJF7 1116 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 RragaQ80X95 313 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Fermt3Q8K1B8 665 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Slc35f6Q8VE96 372 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Mmtag2Q99LX5 260 aaKnown RBP10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Bap1Q99PU7 728 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Mageb16Q9CWV4 363 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Q9D1Z2 194 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 UvssaQ9D479 717 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Ndst4Q9EQW8 872 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Sorbs3Q9R1Z8 733 aa10.95□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Lrp5Q91VN0 1614 aa10.94□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Bpifb4A2BGH0 617 aa10.94□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Vmn2r71L7N2D8 855 aa10.94□□□□□ -0.66
Nedd1-201ENSMUST00000020163 ProcP33587 460 aa10.94□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Pde4dQ01063 747 aa10.94□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Nlrp4cQ3TKR3 982 aa10.94□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Lrrfip1Q3UZ39 729 aaKnown RBP10.94□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Foxn3Q499D0 457 aa10.94□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Inpp4bQ6P1Y8 924 aa10.94□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Tlr13Q6R5N8 991 aa10.94□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Slc5a1Q8C3K6 665 aa10.94□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Ccdc87Q8CDL9 855 aa10.94□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Ccdc80Q8R2G6 949 aa10.94□□□□□ -0.66
Nedd1-201ENSMUST00000020163 FliiQ9JJ28 1271 aa10.94□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Prl2c5Q9JLV9 222 aa10.94□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Rnf4Q9QZS2 194 aa10.94□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Prpf40aQ9R1C7 953 aaKnown RBP10.94□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Ankrd2Q9WV06 328 aa10.94□□□□□ -0.66
Nedd1-201ENSMUST00000020163 FscbA1EGX6 1074 aa10.94□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Tnni2P13412 182 aa10.94□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Plbd2Q3TCN2 594 aa10.94□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Sh3gl1Q62419 368 aa10.94□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Fkbp3Q62446 224 aaKnown RBP10.94□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Trim37Q6PCX9 961 aa10.94□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Haus4Q8BFT2 363 aa10.94□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Kirrel3Q8BR86 778 aa10.94□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Q8C6G1 249 aa10.94□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Rcor2Q8C796 523 aa10.94□□□□□ -0.66
Nedd1-201ENSMUST00000020163 Pus7lQ8CE46 702 aa10.94□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 33.9 ms