RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Msantd4Q91YU3 345 aa13.29□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Gja10Q9WUS4 505 aa13.29□□□□□ -0.28
Rfx1-201ENSMUST00000005600 GakQ99KY4 1305 aa13.29□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Aco1P28271 889 aaKnown RBP13.29□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Nol4P60954 483 aa13.29□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Amigo3Q8C2S7 508 aa13.29□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Cdan1Q8CC12 1239 aa13.29□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Ndufv1Q91YT0 464 aa13.29□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Lzts2Q91YU6 671 aa13.29□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Smc6Q924W5 1097 aa13.29□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Trip6Q9Z1Y4 480 aa13.29□□□□□ -0.28
Rfx1-201ENSMUST00000005600 XlrP05531 208 aa13.29□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Gm5592Q3V0A6 857 aa13.29□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Ddx49Q4FZF3 480 aaKnown RBP13.29□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Cnnm4Q69ZF7 771 aa13.29□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Baiap3Q80TT2 1134 aa13.29□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Rassf10Q8BL43 508 aa13.29□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Q8BWG4 1187 aa13.29□□□□□ -0.28
Rfx1-201ENSMUST00000005600 GzmnQ920S1 248 aa13.29□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Sh3bp5lQ99LH9 392 aa13.29□□□□□ -0.28
Rfx1-201ENSMUST00000005600 FignQ9ERZ6 759 aa13.29□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Gm30191A0A0U1RNT7 187 aa13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Celf1P28659 486 aaKnown RBP13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Tspyl3Q3UYP3 334 aa13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Slc30a9Q5IRJ6 567 aa13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Rhpn1Q61085 643 aa13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Zfp446Q8C9M8 523 aa13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Lrrc41Q8K1C9 807 aa13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Tfap4Q9JIZ5 338 aa13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 McamQ8R2Y2 648 aaKnown RBP13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Tor1aip1Q921T2 595 aaKnown RBP13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 1700020D05RikQ99PB1 294 aa13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Haus2Q9CQS9 234 aa13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Chrna9G3X8Z7 479 aa13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Shc3Q61120 474 aa13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Sh3gl1Q62419 368 aa13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Krt42Q6IFX2 452 aa13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Lrrc15Q80X72 579 aa13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 GopcQ8BH60 463 aa13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Eif3hQ91WK2 352 aaKnown RBP13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Pla2g12bQ99P27 195 aa13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 AacsQ9D2R0 672 aa13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Psmd10Q9Z2X2 231 aa13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Hnrnph3D3Z3N4 346 aaKnown RBP13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Kcna1P16388 495 aa13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Gjc1P28229 396 aa13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Stat4P42228 749 aa13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 PtgdrP70263 357 aa13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Znf280dQ68FE8 974 aa13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Klhl7Q8BUL5 586 aa13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Sde2Q8K1J5 448 aaKnown RBP13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Dbndd1Q9CZ00 160 aa13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Tmem47Q9JJG6 181 aa13.28□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Gad1P48318 593 aa13.27□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Spg7Q3ULF4 781 aa13.27□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Sh3gl2Q62420 352 aa13.27□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Als2cr12Q8BVM7 383 aa13.27□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Ccdc89Q9DA73 370 aa13.27□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Gkap1Q9JMB0 366 aa13.27□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Tnip1Q9WUU8 647 aa13.27□□□□□ -0.28
Rfx1-201ENSMUST00000005600 Prl2c2P04095 224 aa13.27□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Ptpn12P35831 775 aa13.27□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Rps8P62242 208 aaKnown RBP13.27□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Tcerg1lQ3B807 590 aa13.27□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Znf827Q505G8 1078 aa13.27□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Dlg1Q811D0 905 aaKnown RBP13.27□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Rab11fip4Q8BQP8 635 aa13.27□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Alg1Q921Q3 482 aa13.27□□□□□ -0.29
Rfx1-201ENSMUST00000005600 RpainQ9CWY9 219 aa13.27□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Plekhg2Q6KAU7 1340 aa13.27□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Gm7356A0A087WSA6 508 aa13.27□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Rc3h1Q4VGL6 1130 aaKnown RBP13.27□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Nsrp1Q5NCR9 542 aa13.27□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Usp17leQ7M764 540 aa13.27□□□□□ -0.29
Rfx1-201ENSMUST00000005600 PodnQ7TQ62 611 aa13.27□□□□□ -0.29
Rfx1-201ENSMUST00000005600 H6pdQ8CFX1 789 aa13.27□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Ubxn6Q99PL6 442 aa13.27□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Stx17Q9D0I4 301 aa13.27□□□□□ -0.29
Rfx1-201ENSMUST00000005600 AllcQ9JHX6 414 aa13.27□□□□□ -0.29
Rfx1-201ENSMUST00000005600 P3h4Q8K2B0 443 aa13.26□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Zkscan3Q91VW9 553 aa13.26□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Ppp1r3gQ9CW07 347 aa13.26□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Adgra3Q7TT36 1310 aa13.26□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Gm7168A0AUV4 508 aa13.26□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Gm7347D3YYI9 267 aa13.26□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Tcp10bE9PYJ0 438 aa13.26□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Akr1b10G5E895 316 aa13.26□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Actn4P57780 912 aaKnown RBP13.26□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Rnf207Q3V3A7 635 aa13.26□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Brinp3Q499E0 766 aa13.26□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Lrrcc1Q69ZB0 1026 aa13.26□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Myh8P13542 1937 aa13.26□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Pabpc1lA2A5N3 607 aaKnown RBP13.26□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Il15P48346 162 aa13.26□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Npdc1Q64322 332 aa13.26□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Bbs9Q811G0 885 aa13.26□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Ddx47Q9CWX9 455 aaKnown RBP13.26□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Arl2bpQ9D385 163 aa13.26□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Mtmr9Q9Z2D0 545 aa13.26□□□□□ -0.29
Rfx1-201ENSMUST00000005600 Gm5169Q5M8P2 212 aa13.25□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 48 ms