RNA–Protein interactions for RNA: ENST00000641713.1

CCDC196-210, Transcript of coiled-coil domain containing 196, humanhuman

Gene CCDC196, Length 1,464 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-210ENST00000641713 NUP153P49790 1475 aaKnown RBP11.41□□□□□ -0.58
CCDC196-210ENST00000641713 ARAP3Q8WWN8 1544 aa11.4□□□□□ -0.58
CCDC196-210ENST00000641713 AMER1Q5JTC6 1135 aaPredicted RBP11.4□□□□□ -0.58
CCDC196-210ENST00000641713 POLA2Q14181 598 aa11.39□□□□□ -0.59
CCDC196-210ENST00000641713 EFCAB5A4FU69 1503 aa11.38□□□□□ -0.59
CCDC196-210ENST00000641713 PHLDB1Q86UU1 1377 aa11.37□□□□□ -0.59
CCDC196-210ENST00000641713 RTN4Q9NQC3 1192 aaKnown RBP11.37□□□□□ -0.59
CCDC196-210ENST00000641713 NEO1Q92859 1461 aa11.36□□□□□ -0.59
CCDC196-210ENST00000641713 HECW2Q9P2P5 1572 aa11.35□□□□□ -0.59
CCDC196-210ENST00000641713 RAPGEF3O95398 923 aa11.34□□□□□ -0.59
CCDC196-210ENST00000641713 PLEKHD1A6NEE1 506 aa11.33□□□□□ -0.6
CCDC196-210ENST00000641713 FRMPD1Q5SYB0 1578 aa11.33□□□□□ -0.6
CCDC196-210ENST00000641713 SPDYE4A6NLX3 237 aa11.32□□□□□ -0.6
CCDC196-210ENST00000641713 MKRN4PQ13434 485 aaPredicted RBP11.32□□□□□ -0.6
CCDC196-210ENST00000641713 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.32□□□□□ -0.6
CCDC196-210ENST00000641713 UBTFP17480 764 aaKnown RBP11.32□□□□□ -0.6
CCDC196-210ENST00000641713 CDK13Q14004 1512 aaKnown RBP11.31□□□□□ -0.6
CCDC196-210ENST00000641713 TTC37Q6PGP7 1564 aa11.31□□□□□ -0.6
CCDC196-210ENST00000641713 CFAP74Q9C0B2 1584 aa11.31□□□□□ -0.6
CCDC196-210ENST00000641713 FANCAO15360 1455 aa11.3□□□□□ -0.6
CCDC196-210ENST00000641713 RICTORQ6R327 1708 aa11.3□□□□□ -0.6
CCDC196-210ENST00000641713 ADAMTSL3P82987 1691 aa11.29□□□□□ -0.6
CCDC196-210ENST00000641713 AKNAQ7Z591 1439 aa11.28□□□□□ -0.6
CCDC196-210ENST00000641713 DENND4BO75064 1496 aaPredicted RBP11.28□□□□□ -0.6
CCDC196-210ENST00000641713 ARHGEF40Q8TER5 1519 aa11.28□□□□□ -0.6
CCDC196-210ENST00000641713 ABCB7O75027 752 aa11.28□□□□□ -0.6
CCDC196-210ENST00000641713 HECW1Q76N89 1606 aa11.28□□□□□ -0.6
CCDC196-210ENST00000641713 FMN1Q68DA7 1419 aa11.28□□□□□ -0.6
CCDC196-210ENST00000641713 ARHGAP35Q9NRY4 1499 aa11.28□□□□□ -0.6
CCDC196-210ENST00000641713 BCORL1Q5H9F3 1711 aa11.27□□□□□ -0.61
CCDC196-210ENST00000641713 ATP1B4Q9UN42 357 aaPredicted RBP11.26□□□□□ -0.61
CCDC196-210ENST00000641713 PTPRMP28827 1452 aa11.26□□□□□ -0.61
CCDC196-210ENST00000641713 ARID4BQ4LE39 1312 aaPredicted RBP11.25□□□□□ -0.61
CCDC196-210ENST00000641713 ZMYM4Q5VZL5 1548 aa11.25□□□□□ -0.61
CCDC196-210ENST00000641713 MADDQ8WXG6 1647 aa11.25□□□□□ -0.61
CCDC196-210ENST00000641713 MYO5CQ9NQX4 1742 aa11.23□□□□□ -0.61
CCDC196-210ENST00000641713 ZBTB12Q9Y330 459 aaPredicted RBP11.23□□□□□ -0.61
CCDC196-210ENST00000641713 ZFYVE16Q7Z3T8 1539 aa11.22□□□□□ -0.61
CCDC196-210ENST00000641713 PLCH2O75038 1416 aa11.22□□□□□ -0.61
CCDC196-210ENST00000641713 ILDR1Q86SU0 546 aaPredicted RBP11.22□□□□□ -0.61
CCDC196-210ENST00000641713 LRRIQ1Q96JM4 1722 aa11.22□□□□□ -0.61
CCDC196-210ENST00000641713 KIF14Q15058 1648 aa11.22□□□□□ -0.61
CCDC196-210ENST00000641713 RIMS1Q86UR5 1692 aaKnown RBP11.21□□□□□ -0.61
CCDC196-210ENST00000641713 FBXO3Q9UK99 471 aa11.21□□□□□ -0.61
CCDC196-210ENST00000641713 CDK11AQ9UQ88 783 aaPredicted RBP11.21□□□□□ -0.61
CCDC196-210ENST00000641713 POGZQ7Z3K3 1410 aa11.21□□□□□ -0.62
CCDC196-210ENST00000641713 SCAPERQ9BY12 1400 aa11.21□□□□□ -0.62
CCDC196-210ENST00000641713 YEATS2Q9ULM3 1422 aa11.21□□□□□ -0.62
CCDC196-210ENST00000641713 MAGI2Q86UL8 1455 aa11.2□□□□□ -0.62
CCDC196-210ENST00000641713 SIGLEC1Q9BZZ2 1709 aa11.2□□□□□ -0.62
CCDC196-210ENST00000641713 TROQ12816 1431 aaPredicted RBP11.19□□□□□ -0.62
CCDC196-210ENST00000641713 CACNB1Q02641 598 aaPredicted RBP11.19□□□□□ -0.62
CCDC196-210ENST00000641713 CLIP1P30622 1438 aa11.18□□□□□ -0.62
CCDC196-210ENST00000641713 EFCAB2Q5VUJ9 269 aa11.18□□□□□ -0.62
CCDC196-210ENST00000641713 PCF11O94913 1555 aaKnown RBP11.18□□□□□ -0.62
CCDC196-210ENST00000641713 ARHGAP5Q13017 1502 aa11.17□□□□□ -0.62
CCDC196-210ENST00000641713 FER1L4A9Z1Z3 1794 aa11.16□□□□□ -0.62
CCDC196-210ENST00000641713 LMTK3Q96Q04 1460 aa11.16□□□□□ -0.62
CCDC196-210ENST00000641713 CCDC18Q5T9S5 1454 aa11.15□□□□□ -0.62
CCDC196-210ENST00000641713 ZNF518AQ6AHZ1 1483 aa11.15□□□□□ -0.62
CCDC196-210ENST00000641713 CASKIN1Q8WXD9 1431 aa11.14□□□□□ -0.63
CCDC196-210ENST00000641713 CDC42BPBQ9Y5S2 1711 aa11.14□□□□□ -0.63
CCDC196-210ENST00000641713 MLECQ14165 292 aa11.14□□□□□ -0.63
CCDC196-210ENST00000641713 ATP10AO60312 1499 aa11.14□□□□□ -0.63
CCDC196-210ENST00000641713 C9orf84Q5VXU9 1444 aa11.14□□□□□ -0.63
CCDC196-210ENST00000641713 KDM5CP41229 1560 aa11.13□□□□□ -0.63
CCDC196-210ENST00000641713 PREX2Q70Z35 1606 aa11.13□□□□□ -0.63
CCDC196-210ENST00000641713 FYCO1Q9BQS8 1478 aa11.12□□□□□ -0.63
CCDC196-210ENST00000641713 AFAP1Q8N556 730 aa11.12□□□□□ -0.63
CCDC196-210ENST00000641713 ARHGEF12Q9NZN5 1544 aa11.11□□□□□ -0.63
CCDC196-210ENST00000641713 DSG3P32926 999 aa11.11□□□□□ -0.63
CCDC196-210ENST00000641713 MYT1LQ9UL68 1186 aa11.11□□□□□ -0.63
CCDC196-210ENST00000641713 CDC42BPAQ5VT25 1732 aa11.1□□□□□ -0.63
CCDC196-210ENST00000641713 ABCC1P33527 1531 aa11.1□□□□□ -0.63
CCDC196-210ENST00000641713 PROM2Q8N271 834 aa11.1□□□□□ -0.63
CCDC196-210ENST00000641713 DIP2CQ9Y2E4 1556 aa11.1□□□□□ -0.63
CCDC196-210ENST00000641713 ITSN2Q9NZM3 1697 aa11.09□□□□□ -0.63
CCDC196-210ENST00000641713 ABCA6Q8N139 1617 aa11.08□□□□□ -0.64
CCDC196-210ENST00000641713 HSPA2P54652 639 aa11.08□□□□□ -0.64
CCDC196-210ENST00000641713 TRAPPC8Q9Y2L5 1435 aa11.08□□□□□ -0.64
CCDC196-210ENST00000641713 MLH3Q9UHC1 1453 aa11.07□□□□□ -0.64
CCDC196-210ENST00000641713 REREQ9P2R6 1566 aa11.07□□□□□ -0.64
CCDC196-210ENST00000641713 PREX1Q8TCU6 1659 aa11.06□□□□□ -0.64
CCDC196-210ENST00000641713 KIDINS220Q9ULH0 1771 aa11.05□□□□□ -0.64
CCDC196-210ENST00000641713 CEBPAP49715 358 aaPredicted RBP11.05□□□□□ -0.64
CCDC196-210ENST00000641713 FBXO41Q8TF61 875 aa11.05□□□□□ -0.64
CCDC196-210ENST00000641713 SAMD9LQ8IVG5 1584 aa11.04□□□□□ -0.64
CCDC196-210ENST00000641713 ZNF777Q9ULD5 760 aaPredicted RBP11.03□□□□□ -0.64
CCDC196-210ENST00000641713 AGLP35573 1532 aa11.03□□□□□ -0.64
CCDC196-210ENST00000641713 SYCP2Q9BX26 1530 aa11.03□□□□□ -0.64
CCDC196-210ENST00000641713 GPATCH8Q9UKJ3 1502 aaKnown RBP11.03□□□□□ -0.64
CCDC196-210ENST00000641713 VASPP50552 380 aaPredicted RBP11.02□□□□□ -0.65
CCDC196-210ENST00000641713 SETD1BQ9UPS6 1966 aaKnown RBP11.02□□□□□ -0.65
CCDC196-210ENST00000641713 C3P01024 1663 aa11.01□□□□□ -0.65
CCDC196-210ENST00000641713 MTUS2Q5JR59 1369 aa11.01□□□□□ -0.65
CCDC196-210ENST00000641713 ZNF692Q9BU19 519 aaPredicted RBP11□□□□□ -0.65
CCDC196-210ENST00000641713 ESF1Q9H501 851 aaKnown RBP11□□□□□ -0.65
CCDC196-210ENST00000641713 UHRF1BP1Q6BDS2 1440 aa11□□□□□ -0.65
CCDC196-210ENST00000641713 CCNB3Q8WWL7 1395 aa11□□□□□ -0.65
CCDC196-210ENST00000641713 HNRNPMP52272 730 aaKnown RBP eCLIP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms