RNA–Protein interactions for RNA: ENST00000641340.1

MFSD8-223, Transcript of major facilitator superfamily domain containing 8, human

Gene MFSD8, Length 2,098 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MFSD8-223	ENST00000641340	UBE2Q2	Q8WVN8	375 aa		10.6	□□□□□ -0.71
MFSD8-223	ENST00000641340	HMGXB3	Q12766	1538 aa		10.6	□□□□□ -0.71
MFSD8-223	ENST00000641340	APBB1	O00213	710 aa		10.57	□□□□□ -0.72
MFSD8-223	ENST00000641340	BRD2	P25440	801 aa	Known RBP	10.57	□□□□□ -0.72
MFSD8-223	ENST00000641340	NCAPD3	P42695	1498 aa		10.57	□□□□□ -0.72
MFSD8-223	ENST00000641340	CCDC88B	A6NC98	1476 aa		10.56	□□□□□ -0.72
MFSD8-223	ENST00000641340	MTMR7	Q9Y216	660 aa		10.56	□□□□□ -0.72
MFSD8-223	ENST00000641340	MAP3K13	O43283	966 aa		10.56	□□□□□ -0.72
MFSD8-223	ENST00000641340	CHRM1	P11229	460 aa	Predicted RBP	10.56	□□□□□ -0.72
MFSD8-223	ENST00000641340	KIF12	Q96FN5	646 aa		10.56	□□□□□ -0.72
MFSD8-223	ENST00000641340	PCDHB8	Q9UN66	801 aa		10.54	□□□□□ -0.72
MFSD8-223	ENST00000641340	PCDHB13	Q9Y5F0	798 aa		10.54	□□□□□ -0.72
MFSD8-223	ENST00000641340	TRIM41	Q8WV44	630 aa		10.53	□□□□□ -0.72
MFSD8-223	ENST00000641340	SLC24A3	Q9HC58	644 aa		10.53	□□□□□ -0.72
MFSD8-223	ENST00000641340	RBM25	P49756	843 aa	Known RBP	10.52	□□□□□ -0.73
MFSD8-223	ENST00000641340	ZNF579	Q8NAF0	562 aa	Known RBP	10.52	□□□□□ -0.73
MFSD8-223	ENST00000641340	FOXD4L5	Q5VV16	416 aa	Predicted RBP	10.51	□□□□□ -0.73
MFSD8-223	ENST00000641340	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	10.51	□□□□□ -0.73
MFSD8-223	ENST00000641340	IFNL1	Q8IU54	200 aa		10.5	□□□□□ -0.73
MFSD8-223	ENST00000641340	RIOK3	O14730	519 aa	Known RBP	10.48	□□□□□ -0.73
MFSD8-223	ENST00000641340	TRPC6	Q9Y210	931 aa		10.47	□□□□□ -0.73
MFSD8-223	ENST00000641340	MS4A3	Q96HJ5	214 aa		10.46	□□□□□ -0.73
MFSD8-223	ENST00000641340	ZC3H15	Q8WU90	426 aa	Known RBP	10.46	□□□□□ -0.74
MFSD8-223	ENST00000641340	GALR2	O43603	387 aa	Predicted RBP	10.45	□□□□□ -0.74
MFSD8-223	ENST00000641340	POLR3GL	Q9BT43	218 aa		10.44	□□□□□ -0.74
MFSD8-223	ENST00000641340	FAM9A	Q8IZU1	332 aa	Predicted RBP	10.43	□□□□□ -0.74
MFSD8-223	ENST00000641340	PRDM2	Q13029	1718 aa		10.42	□□□□□ -0.74
MFSD8-223	ENST00000641340	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	10.42	□□□□□ -0.74
MFSD8-223	ENST00000641340	AEBP1	Q8IUX7	1158 aa		10.42	□□□□□ -0.74
MFSD8-223	ENST00000641340	CCDC82	Q8N4S0	544 aa		10.42	□□□□□ -0.74
MFSD8-223	ENST00000641340	ZFP91	Q96JP5	570 aa	Predicted RBP	10.42	□□□□□ -0.74
MFSD8-223	ENST00000641340	NKX1-1	Q15270	411 aa	Predicted RBP	10.4	□□□□□ -0.74
MFSD8-223	ENST00000641340	ZNF467	Q7Z7K2	595 aa	Predicted RBP	10.4	□□□□□ -0.74
MFSD8-223	ENST00000641340	HS6ST3	Q8IZP7	471 aa		10.4	□□□□□ -0.74
MFSD8-223	ENST00000641340	GABBR2	O75899	941 aa		10.4	□□□□□ -0.75
MFSD8-223	ENST00000641340	SGIP1	Q9BQI5	828 aa		10.4	□□□□□ -0.75
MFSD8-223	ENST00000641340	PDE4C	Q08493	712 aa		10.39	□□□□□ -0.75
MFSD8-223	ENST00000641340	TMCO4	Q5TGY1	634 aa		10.39	□□□□□ -0.75
MFSD8-223	ENST00000641340	VGF	O15240	615 aa	Predicted RBP	10.38	□□□□□ -0.75
MFSD8-223	ENST00000641340	MFAP1	P55081	439 aa	Known RBP	10.38	□□□□□ -0.75
MFSD8-223	ENST00000641340	PSEN1	P49768	467 aa		10.37	□□□□□ -0.75
MFSD8-223	ENST00000641340	P3H3	Q8IVL6	736 aa		10.37	□□□□□ -0.75
MFSD8-223	ENST00000641340	ABCC8	Q09428	1581 aa		10.37	□□□□□ -0.75
MFSD8-223	ENST00000641340	MKRN3	Q13064	507 aa	Known RBP	10.37	□□□□□ -0.75
MFSD8-223	ENST00000641340	TRAIP	Q9BWF2	469 aa		10.37	□□□□□ -0.75
MFSD8-223	ENST00000641340	USP35	Q9P2H5	1018 aa		10.37	□□□□□ -0.75
MFSD8-223	ENST00000641340	STK25	O00506	426 aa		10.36	□□□□□ -0.75
MFSD8-223	ENST00000641340	GTPBP6	O43824	516 aa	Predicted RBP	10.36	□□□□□ -0.75
MFSD8-223	ENST00000641340	PDAP1	Q13442	181 aa	Known RBP	10.35	□□□□□ -0.75
MFSD8-223	ENST00000641340	BCL11B	Q9C0K0	894 aa	Predicted RBP	10.35	□□□□□ -0.75
MFSD8-223	ENST00000641340	IL27	Q8NEV9	243 aa		10.34	□□□□□ -0.75
MFSD8-223	ENST00000641340	CFTR	P13569	1480 aa		10.34	□□□□□ -0.75
MFSD8-223	ENST00000641340	TAF7L	Q5H9L4	462 aa		10.34	□□□□□ -0.75
MFSD8-223	ENST00000641340	SP7	Q8TDD2	431 aa	Predicted RBP	10.34	□□□□□ -0.75
MFSD8-223	ENST00000641340	KCNV2	Q8TDN2	545 aa		10.34	□□□□□ -0.75
MFSD8-223	ENST00000641340	STK24	Q9Y6E0	443 aa		10.33	□□□□□ -0.76
MFSD8-223	ENST00000641340	GPBP1L1	Q9HC44	474 aa	Predicted RBP	10.32	□□□□□ -0.76
MFSD8-223	ENST00000641340	FAM177A1	Q8N128	213 aa	Predicted RBP	10.31	□□□□□ -0.76
MFSD8-223	ENST00000641340	TMEM106C	Q9BVX2	250 aa		10.31	□□□□□ -0.76
MFSD8-223	ENST00000641340		E9PSI1	815 aa		10.3	□□□□□ -0.76
MFSD8-223	ENST00000641340	GZF1	Q9H116	711 aa	Predicted RBP	10.3	□□□□□ -0.76
MFSD8-223	ENST00000641340	BMP2K	Q9NSY1	1161 aa	Predicted RBP	10.3	□□□□□ -0.76
MFSD8-223	ENST00000641340	NES	P48681	1621 aa		10.29	□□□□□ -0.76
MFSD8-223	ENST00000641340	SYNJ1	O43426	1573 aa		10.28	□□□□□ -0.76
MFSD8-223	ENST00000641340	TTLL13P	A6NNM8	815 aa		10.28	□□□□□ -0.76
MFSD8-223	ENST00000641340	CADPS	Q9ULU8	1353 aa		10.28	□□□□□ -0.76
MFSD8-223	ENST00000641340	CABP2	Q9NPB3	220 aa		10.27	□□□□□ -0.77
MFSD8-223	ENST00000641340	LAMC3	Q9Y6N6	1575 aa		10.26	□□□□□ -0.77
MFSD8-223	ENST00000641340	CLCN6	P51797	869 aa		10.25	□□□□□ -0.77
MFSD8-223	ENST00000641340	BCL11A	Q9H165	835 aa		10.25	□□□□□ -0.77
MFSD8-223	ENST00000641340	TIE1	P35590	1138 aa		10.24	□□□□□ -0.77
MFSD8-223	ENST00000641340	ATN1	P54259	1190 aa	Predicted RBP	10.24	□□□□□ -0.77
MFSD8-223	ENST00000641340	WDR70	Q9NW82	654 aa		10.24	□□□□□ -0.77
MFSD8-223	ENST00000641340	WRN	Q14191	1432 aa	Predicted RBP eCLIP	10.24	□□□□□ -0.77
MFSD8-223	ENST00000641340	BIVM-ERCC5	R4GMW8	1640 aa		10.24	□□□□□ -0.77
MFSD8-223	ENST00000641340	POTEI	P0CG38	1075 aa		10.24	□□□□□ -0.77
MFSD8-223	ENST00000641340	EFCAB3	Q8N7B9	438 aa		10.24	□□□□□ -0.77
MFSD8-223	ENST00000641340	KIF21A	Q7Z4S6	1674 aa		10.23	□□□□□ -0.77
MFSD8-223	ENST00000641340	ATMIN	O43313	823 aa	Predicted RBP	10.23	□□□□□ -0.77
MFSD8-223	ENST00000641340	TOP2B	Q02880	1626 aa		10.22	□□□□□ -0.77
MFSD8-223	ENST00000641340	CUX1	P39880	1505 aa		10.21	□□□□□ -0.77
MFSD8-223	ENST00000641340	TRIM35	Q9UPQ4	493 aa		10.21	□□□□□ -0.77
MFSD8-223	ENST00000641340	FANCD2	Q9BXW9	1451 aa		10.2	□□□□□ -0.78
MFSD8-223	ENST00000641340	ZMYND10	O75800	440 aa		10.2	□□□□□ -0.78
MFSD8-223	ENST00000641340	ASTL	Q6HA08	431 aa	Predicted RBP	10.2	□□□□□ -0.78
MFSD8-223	ENST00000641340	DCBLD2	Q96PD2	775 aa		10.2	□□□□□ -0.78
MFSD8-223	ENST00000641340	RSPH4A	Q5TD94	716 aa		10.19	□□□□□ -0.78
MFSD8-223	ENST00000641340	CWC22	Q9HCG8	908 aa	Known RBP	10.18	□□□□□ -0.78
MFSD8-223	ENST00000641340	MFRP	Q9BY79	579 aa		10.17	□□□□□ -0.78
MFSD8-223	ENST00000641340	PPM1G	O15355	546 aa	Predicted RBP	10.16	□□□□□ -0.78
MFSD8-223	ENST00000641340	PHF8	Q9UPP1	1060 aa		10.16	□□□□□ -0.78
MFSD8-223	ENST00000641340	TRAK2	O60296	914 aa		10.15	□□□□□ -0.78
MFSD8-223	ENST00000641340	CLUAP1	Q96AJ1	413 aa		10.15	□□□□□ -0.78
MFSD8-223	ENST00000641340	CEP164	Q9UPV0	1460 aa		10.14	□□□□□ -0.79
MFSD8-223	ENST00000641340	KDM4C	Q9H3R0	1056 aa		10.14	□□□□□ -0.79
MFSD8-223	ENST00000641340	GOLGA2	Q08379	1002 aa		10.14	□□□□□ -0.79
MFSD8-223	ENST00000641340	IRF5	Q13568	498 aa		10.14	□□□□□ -0.79
MFSD8-223	ENST00000641340	DNMBP	Q6XZF7	1577 aa		10.13	□□□□□ -0.79
MFSD8-223	ENST00000641340	RETREG2	Q8NC44	543 aa		10.13	□□□□□ -0.79
MFSD8-223	ENST00000641340	BCCIP	Q9P287	314 aa	Known RBP eCLIP	10.13	□□□□□ -0.79

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