RNA–Protein interactions for RNA: ENST00000640958.1

SP3-208, Transcript of Sp3 transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP3, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-208ENST00000640958 ABCC10Q5T3U5 1492 aa29.62■■■□□ 2.33
SP3-208ENST00000640958 TIMELESSQ9UNS1 1208 aa29.62■■■□□ 2.33
SP3-208ENST00000640958 CLASP1Q7Z460 1538 aa29.61■■■□□ 2.33
SP3-208ENST00000640958 ERCC6L2Q5T890 1561 aa29.6■■■□□ 2.33
SP3-208ENST00000640958 NEUROD1Q13562 356 aa29.6■■■□□ 2.33
SP3-208ENST00000640958 CROCC2H7BZ55 1655 aa29.59■■■□□ 2.33
SP3-208ENST00000640958 PLEKHD1A6NEE1 506 aa29.58■■■□□ 2.33
SP3-208ENST00000640958 CFDP1Q9UEE9 299 aaPredicted RBP29.57■■■□□ 2.32
SP3-208ENST00000640958 ADGBQ8N7X0 1667 aa29.57■■■□□ 2.32
SP3-208ENST00000640958 DENND4BO75064 1496 aaPredicted RBP29.55■■■□□ 2.32
SP3-208ENST00000640958 ABCC2Q92887 1545 aa29.48■■■□□ 2.31
SP3-208ENST00000640958 ADGRL2O95490 1459 aa29.48■■■□□ 2.31
SP3-208ENST00000640958 PPP1R15AO75807 674 aaPredicted RBP29.43■■■□□ 2.3
SP3-208ENST00000640958 TONSLQ96HA7 1378 aa29.43■■■□□ 2.3
SP3-208ENST00000640958 MIER1Q8N108 512 aa29.42■■■□□ 2.3
SP3-208ENST00000640958 TRIM52Q96A61 297 aa29.42■■■□□ 2.3
SP3-208ENST00000640958 PREX2Q70Z35 1606 aa29.42■■■□□ 2.3
SP3-208ENST00000640958 ACIN1Q9UKV3 1341 aaKnown RBP29.42■■■□□ 2.3
SP3-208ENST00000640958 NCOA1Q15788 1441 aa29.41■■■□□ 2.3
SP3-208ENST00000640958 ZNF777Q9ULD5 760 aaPredicted RBP29.41■■■□□ 2.3
SP3-208ENST00000640958 CDC42BPBQ9Y5S2 1711 aa29.4■■■□□ 2.3
SP3-208ENST00000640958 SHANK2Q9UPX8 1470 aa29.4■■■□□ 2.3
SP3-208ENST00000640958 KDM5BQ9UGL1 1544 aa29.39■■■□□ 2.3
SP3-208ENST00000640958 MPHOSPH9Q99550 1183 aa29.37■■■□□ 2.29
SP3-208ENST00000640958 ARHGEF5Q12774 1597 aa29.35■■■□□ 2.29
SP3-208ENST00000640958 TTC37Q6PGP7 1564 aa29.34■■■□□ 2.29
SP3-208ENST00000640958 SAMD9LQ8IVG5 1584 aa29.33■■■□□ 2.29
SP3-208ENST00000640958 UHRF1BP1LA0JNW5 1464 aa29.32■■■□□ 2.28
SP3-208ENST00000640958 ANKRD30AQ9BXX3 1397 aa29.31■■■□□ 2.28
SP3-208ENST00000640958 ZCCHC11Q5TAX3 1644 aaKnown RBP29.31■■■□□ 2.28
SP3-208ENST00000640958 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.3■■■□□ 2.281e-6■■□□□ 11.6
SP3-208ENST00000640958 C9orf84Q5VXU9 1444 aa29.3■■■□□ 2.28
SP3-208ENST00000640958 PZPP20742 1482 aa29.28■■■□□ 2.28
SP3-208ENST00000640958 MBD5Q9P267 1494 aa29.28■■■□□ 2.28
SP3-208ENST00000640958 MYO5CQ9NQX4 1742 aa29.26■■■□□ 2.27
SP3-208ENST00000640958 ANKRD30BQ9BXX2 1392 aa29.24■■■□□ 2.27
SP3-208ENST00000640958 CCDC141Q6ZP82 1450 aa29.22■■■□□ 2.27
SP3-208ENST00000640958 ANKRD50Q9ULJ7 1429 aa29.21■■■□□ 2.27
SP3-208ENST00000640958 ARHGAP5Q13017 1502 aa29.19■■■□□ 2.26
SP3-208ENST00000640958 FOXD1Q16676 465 aa29.19■■■□□ 2.26
SP3-208ENST00000640958 RPRD2Q5VT52 1461 aaKnown RBP29.18■■■□□ 2.26
SP3-208ENST00000640958 HNRNPMP52272 730 aaKnown RBP eCLIP29.17■■■□□ 2.264e-7■■■■□ 25.7
SP3-208ENST00000640958 SLC4A1APQ9BWU0 796 aaKnown RBP29.17■■■□□ 2.26
SP3-208ENST00000640958 SYCP2Q9BX26 1530 aa29.17■■■□□ 2.26
SP3-208ENST00000640958 CENPBP07199 599 aaPredicted RBP29.16■■■□□ 2.26
SP3-208ENST00000640958 MAST1Q9Y2H9 1570 aa29.14■■■□□ 2.26
SP3-208ENST00000640958 TSPY4P0CV99 314 aa29.14■■■□□ 2.25
SP3-208ENST00000640958 TSPY10P0CW01 314 aa29.14■■■□□ 2.25
SP3-208ENST00000640958 KDM5DQ9BY66 1539 aa29.13■■■□□ 2.25
SP3-208ENST00000640958 TEX14Q8IWB6 1497 aa29.11■■■□□ 2.25
SP3-208ENST00000640958 KIF15Q9NS87 1388 aa29.11■■■□□ 2.25
SP3-208ENST00000640958 KIAA1107Q9UPP5 1409 aa29.1■■■□□ 2.25
SP3-208ENST00000640958 RSPH4AQ5TD94 716 aa29.09■■■□□ 2.25
SP3-208ENST00000640958 PLEKHH2Q8IVE3 1493 aa29.09■■■□□ 2.25
SP3-208ENST00000640958 PLCH2O75038 1416 aa29.05■■■□□ 2.24
SP3-208ENST00000640958 L3MBTL2Q969R5 705 aa29.05■■■□□ 2.24
SP3-208ENST00000640958 SCAF1Q9H7N4 1312 aaKnown RBP29.04■■■□□ 2.24
SP3-208ENST00000640958 KCNH8Q96L42 1107 aa29.03■■■□□ 2.24
SP3-208ENST00000640958 YTHDC1Q96MU7 727 aaKnown RBP29.03■■■□□ 2.24
SP3-208ENST00000640958 PLXNC1O60486 1568 aa29.03■■■□□ 2.24
SP3-208ENST00000640958 HIRIP3Q9BW71 556 aaPredicted RBP29.02■■■□□ 2.24
SP3-208ENST00000640958 ARHGEF12Q9NZN5 1544 aa29■■■□□ 2.23
SP3-208ENST00000640958 NUP155O75694 1391 aa28.99■■■□□ 2.23
SP3-208ENST00000640958 ABCC1P33527 1531 aa28.99■■■□□ 2.23
SP3-208ENST00000640958 PKD2Q13563 968 aa28.98■■■□□ 2.23
SP3-208ENST00000640958 ARAP3Q8WWN8 1544 aa28.97■■■□□ 2.23
SP3-208ENST00000640958 DDX10Q13206 875 aaKnown RBP28.97■■■□□ 2.23
SP3-208ENST00000640958 WDR7Q9Y4E6 1490 aa28.96■■■□□ 2.23
SP3-208ENST00000640958 UNC13BO14795 1591 aa28.95■■■□□ 2.22
SP3-208ENST00000640958 EFCAB2Q5VUJ9 269 aa28.91■■■□□ 2.22
SP3-208ENST00000640958 FAM135AQ9P2D6 1515 aa28.89■■■□□ 2.22
SP3-208ENST00000640958 ABCA9Q8IUA7 1624 aa28.89■■■□□ 2.21
SP3-208ENST00000640958 NBPF8Q3BBV2 869 aa28.87■■■□□ 2.21
SP3-208ENST00000640958 DUOX2Q9NRD8 1548 aa28.87■■■□□ 2.21
SP3-208ENST00000640958 OSCARQ8IYS5 282 aa28.87■■■□□ 2.21
SP3-208ENST00000640958 HSPA5P11021 654 aaKnown RBP28.86■■■□□ 2.21
SP3-208ENST00000640958 TRAPPC8Q9Y2L5 1435 aa28.84■■■□□ 2.21
SP3-208ENST00000640958 IQGAP3Q86VI3 1631 aa28.83■■■□□ 2.2
SP3-208ENST00000640958 EIF4G2P78344 907 aaKnown RBP eCLIP28.82■■■□□ 2.2
SP3-208ENST00000640958 ERBINQ96RT1 1412 aa28.81■■■□□ 2.2
SP3-208ENST00000640958 MAGI2Q86UL8 1455 aa28.81■■■□□ 2.2
SP3-208ENST00000640958 ASXL2Q76L83 1435 aa28.79■■■□□ 2.2
SP3-208ENST00000640958 ZFYVE16Q7Z3T8 1539 aa28.76■■■□□ 2.2
SP3-208ENST00000640958 FANCAO15360 1455 aa28.74■■■□□ 2.19
SP3-208ENST00000640958 RTEL1-TNFRSF6BF6WH68 1400 aa28.74■■■□□ 2.19
SP3-208ENST00000640958 SPATA31E1Q6ZUB1 1445 aa28.73■■■□□ 2.19
SP3-208ENST00000640958 WASHC2AQ641Q2 1341 aa28.73■■■□□ 2.19
SP3-208ENST00000640958 POLR1AO95602 1720 aaPredicted RBP28.73■■■□□ 2.19
SP3-208ENST00000640958 UHRF1BP1Q6BDS2 1440 aa28.72■■■□□ 2.19
SP3-208ENST00000640958 INO80Q9ULG1 1556 aaPredicted RBP28.71■■■□□ 2.19
SP3-208ENST00000640958 GTF3C3Q9Y5Q9 886 aa28.7■■■□□ 2.18
SP3-208ENST00000640958 SPAG9O60271 1321 aaKnown RBP28.67■■■□□ 2.18
SP3-208ENST00000640958 PLA2R1Q13018 1463 aa28.66■■■□□ 2.18
SP3-208ENST00000640958 ANP32CO43423 234 aa28.65■■■□□ 2.18
SP3-208ENST00000640958 RALGAPBQ86X10 1494 aa28.65■■■□□ 2.18
SP3-208ENST00000640958 ATP7AQ04656 1500 aa28.64■■■□□ 2.18
SP3-208ENST00000640958 ADGRL1O94910 1474 aa28.64■■■□□ 2.18
SP3-208ENST00000640958 AFAP1Q8N556 730 aa28.63■■■□□ 2.17
SP3-208ENST00000640958 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.63■■■□□ 2.177e-13■■□□□ 12.4
SP3-208ENST00000640958 CCER2I3L3R5 266 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms