RNA–Protein interactions for RNA: ENST00000640634.1

SCARB2-222, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-222ENST00000640634 PREX2Q70Z35 1606 aa17.16■□□□□ 0.34
SCARB2-222ENST00000640634 APLP2Q06481 763 aa17.16■□□□□ 0.34
SCARB2-222ENST00000640634 NCBP3Q53F19 620 aaKnown RBP17.16■□□□□ 0.34
SCARB2-222ENST00000640634 PLCH2O75038 1416 aa17.15■□□□□ 0.34
SCARB2-222ENST00000640634 TEX14Q8IWB6 1497 aa17.15■□□□□ 0.34
SCARB2-222ENST00000640634 GPATCH8Q9UKJ3 1502 aaKnown RBP17.14■□□□□ 0.33
SCARB2-222ENST00000640634 FANCAO15360 1455 aa17.14■□□□□ 0.33
SCARB2-222ENST00000640634 ARHGAP5Q13017 1502 aa17.14■□□□□ 0.33
SCARB2-222ENST00000640634 KDM6BO15054 1643 aa17.13■□□□□ 0.33
SCARB2-222ENST00000640634 CCNB3Q8WWL7 1395 aa17.11■□□□□ 0.33
SCARB2-222ENST00000640634 ARAP3Q8WWN8 1544 aa17.09■□□□□ 0.33
SCARB2-222ENST00000640634 NEO1Q92859 1461 aa17.09■□□□□ 0.33
SCARB2-222ENST00000640634 AKNAQ7Z591 1439 aa17.09■□□□□ 0.33
SCARB2-222ENST00000640634 SAMD9LQ8IVG5 1584 aa17.08■□□□□ 0.33
SCARB2-222ENST00000640634 PHLDB1Q86UU1 1377 aa17.08■□□□□ 0.32
SCARB2-222ENST00000640634 FRMPD1Q5SYB0 1578 aa17.07■□□□□ 0.32
SCARB2-222ENST00000640634 CFAP74Q9C0B2 1584 aa17.07■□□□□ 0.32
SCARB2-222ENST00000640634 ITSN2Q9NZM3 1697 aa17.07■□□□□ 0.32
SCARB2-222ENST00000640634 ZNF777Q9ULD5 760 aaPredicted RBP17.07■□□□□ 0.32
SCARB2-222ENST00000640634 ZNF644Q9H582 1327 aaPredicted RBP17.06■□□□□ 0.32
SCARB2-222ENST00000640634 ADGRL1O94910 1474 aa17.06■□□□□ 0.32
SCARB2-222ENST00000640634 ARHGEF12Q9NZN5 1544 aa17.06■□□□□ 0.32
SCARB2-222ENST00000640634 RAPGEF3O95398 923 aa17.05■□□□□ 0.32
SCARB2-222ENST00000640634 EFCAB2Q5VUJ9 269 aa17.05■□□□□ 0.32
SCARB2-222ENST00000640634 CFDP1Q9UEE9 299 aaPredicted RBP17.04■□□□□ 0.32
SCARB2-222ENST00000640634 ABCC1P33527 1531 aa17.04■□□□□ 0.32
SCARB2-222ENST00000640634 SCAPERQ9BY12 1400 aa17.03■□□□□ 0.32
SCARB2-222ENST00000640634 SYCP2Q9BX26 1530 aa17.02■□□□□ 0.32
SCARB2-222ENST00000640634 RICTORQ6R327 1708 aa17.02■□□□□ 0.32
SCARB2-222ENST00000640634 MYOM3Q5VTT5 1437 aa17.02■□□□□ 0.32
SCARB2-222ENST00000640634 DENND4BO75064 1496 aaPredicted RBP17■□□□□ 0.31
SCARB2-222ENST00000640634 CAMSAP2Q08AD1 1489 aa17■□□□□ 0.31
SCARB2-222ENST00000640634 POGZQ7Z3K3 1410 aa17■□□□□ 0.31
SCARB2-222ENST00000640634 TRAPPC8Q9Y2L5 1435 aa17■□□□□ 0.31
SCARB2-222ENST00000640634 HNRNPMP52272 730 aaKnown RBP eCLIP16.98■□□□□ 0.31
SCARB2-222ENST00000640634 FGD6Q6ZV73 1430 aa16.96■□□□□ 0.31
SCARB2-222ENST00000640634 AFAP1Q8N556 730 aa16.96■□□□□ 0.31
SCARB2-222ENST00000640634 PTPN23Q9H3S7 1636 aa16.95■□□□□ 0.3
SCARB2-222ENST00000640634 MBD5Q9P267 1494 aa16.94■□□□□ 0.3
SCARB2-222ENST00000640634 DAXXQ9UER7 740 aaPredicted RBP16.93■□□□□ 0.3
SCARB2-222ENST00000640634 KDM5CP41229 1560 aa16.93■□□□□ 0.3
SCARB2-222ENST00000640634 MIA2Q96PC5 1412 aa16.93■□□□□ 0.3
SCARB2-222ENST00000640634 ZNF518AQ6AHZ1 1483 aa16.92■□□□□ 0.3
SCARB2-222ENST00000640634 YEATS2Q9ULM3 1422 aa16.92■□□□□ 0.3
SCARB2-222ENST00000640634 ZMYM4Q5VZL5 1548 aa16.92■□□□□ 0.3
SCARB2-222ENST00000640634 SLC4A1APQ9BWU0 796 aaKnown RBP16.92■□□□□ 0.3
SCARB2-222ENST00000640634 KIAA1107Q9UPP5 1409 aa16.92■□□□□ 0.3
SCARB2-222ENST00000640634 PLEKHH2Q8IVE3 1493 aa16.91■□□□□ 0.3
SCARB2-222ENST00000640634 TCOF1Q13428 1488 aaKnown RBP16.89■□□□□ 0.29
SCARB2-222ENST00000640634 HECW2Q9P2P5 1572 aa16.89■□□□□ 0.29
SCARB2-222ENST00000640634 ARHGEF40Q8TER5 1519 aa16.88■□□□□ 0.29
SCARB2-222ENST00000640634 ZFYVE16Q7Z3T8 1539 aa16.88■□□□□ 0.29
SCARB2-222ENST00000640634 SIGLEC1Q9BZZ2 1709 aa16.88■□□□□ 0.29
SCARB2-222ENST00000640634 KIDINS220Q9ULH0 1771 aa16.87■□□□□ 0.29
SCARB2-222ENST00000640634 ABCA6Q8N139 1617 aa16.87■□□□□ 0.29
SCARB2-222ENST00000640634 ARHGEF5Q12774 1597 aa16.87■□□□□ 0.29
SCARB2-222ENST00000640634 CCDC141Q6ZP82 1450 aa16.87■□□□□ 0.29
SCARB2-222ENST00000640634 INO80Q9ULG1 1556 aaPredicted RBP16.86■□□□□ 0.29
SCARB2-222ENST00000640634 FAM50AQ14320 339 aaKnown RBP16.86■□□□□ 0.29
SCARB2-222ENST00000640634 DIP2CQ9Y2E4 1556 aa16.85■□□□□ 0.29
SCARB2-222ENST00000640634 ATP7AQ04656 1500 aa16.84■□□□□ 0.29
SCARB2-222ENST00000640634 ABCC5O15440 1437 aa16.84■□□□□ 0.29
SCARB2-222ENST00000640634 DNMT1P26358 1616 aaKnown RBP16.84■□□□□ 0.29
SCARB2-222ENST00000640634 MLH3Q9UHC1 1453 aa16.84■□□□□ 0.29
SCARB2-222ENST00000640634 SPAG9O60271 1321 aaKnown RBP16.84■□□□□ 0.29
SCARB2-222ENST00000640634 CROCC2H7BZ55 1655 aa16.83■□□□□ 0.29
SCARB2-222ENST00000640634 MYT1LQ9UL68 1186 aa16.83■□□□□ 0.28
SCARB2-222ENST00000640634 DAPK1P53355 1430 aa16.82■□□□□ 0.28
SCARB2-222ENST00000640634 MAGI2Q86UL8 1455 aa16.82■□□□□ 0.28
SCARB2-222ENST00000640634 RRBP1Q9P2E9 1410 aaKnown RBP16.81■□□□□ 0.28
SCARB2-222ENST00000640634 PTPRKQ15262 1439 aa16.8■□□□□ 0.28
SCARB2-222ENST00000640634 C9orf84Q5VXU9 1444 aa16.79■□□□□ 0.28
SCARB2-222ENST00000640634 ITGAEP38570 1179 aa16.78■□□□□ 0.28
SCARB2-222ENST00000640634 ADGBQ8N7X0 1667 aa16.78■□□□□ 0.28
SCARB2-222ENST00000640634 MAST1Q9Y2H9 1570 aa16.77■□□□□ 0.28
SCARB2-222ENST00000640634 ATP10AO60312 1499 aa16.77■□□□□ 0.28
SCARB2-222ENST00000640634 CHIC2Q9UKJ5 165 aa16.77■□□□□ 0.28
SCARB2-222ENST00000640634 SHANK2Q9UPX8 1470 aa16.75■□□□□ 0.27
SCARB2-222ENST00000640634 RTEL1-TNFRSF6BF6WH68 1400 aa16.74■□□□□ 0.27
SCARB2-222ENST00000640634 TSPY4P0CV99 314 aa16.74■□□□□ 0.27
SCARB2-222ENST00000640634 TSPY10P0CW01 314 aa16.74■□□□□ 0.27
SCARB2-222ENST00000640634 RSPH4AQ5TD94 716 aa16.73■□□□□ 0.27
SCARB2-222ENST00000640634 PLXNC1O60486 1568 aa16.73■□□□□ 0.27
SCARB2-222ENST00000640634 ARID4BQ4LE39 1312 aaPredicted RBP16.72■□□□□ 0.27
SCARB2-222ENST00000640634 A2MP01023 1474 aa16.71■□□□□ 0.27
SCARB2-222ENST00000640634 REREQ9P2R6 1566 aa16.71■□□□□ 0.27
SCARB2-222ENST00000640634 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.7■□□□□ 0.26
SCARB2-222ENST00000640634 MLECQ14165 292 aa16.7■□□□□ 0.26
SCARB2-222ENST00000640634 RRP7BPQ9NSQ0 103 aa16.7■□□□□ 0.26
SCARB2-222ENST00000640634 BCORL1Q5H9F3 1711 aa16.68■□□□□ 0.26
SCARB2-222ENST00000640634 KIF15Q9NS87 1388 aa16.68■□□□□ 0.26
SCARB2-222ENST00000640634 ADGRL2O95490 1459 aa16.68■□□□□ 0.26
SCARB2-222ENST00000640634 NCOA1Q15788 1441 aa16.67■□□□□ 0.26
SCARB2-222ENST00000640634 KDM4FA0A1W2PPD8 638 aa16.67■□□□□ 0.26
SCARB2-222ENST00000640634 DHX29Q7Z478 1369 aaKnown RBP16.65■□□□□ 0.26
SCARB2-222ENST00000640634 AGLP35573 1532 aa16.65■□□□□ 0.26
SCARB2-222ENST00000640634 MADDQ8WXG6 1647 aa16.65■□□□□ 0.26
SCARB2-222ENST00000640634 ANKRD30AQ9BXX3 1397 aa16.65■□□□□ 0.26
SCARB2-222ENST00000640634 ADAMTSL3P82987 1691 aa16.64■□□□□ 0.25
SCARB2-222ENST00000640634 DUOX2Q9NRD8 1548 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms