RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 DENND4BO75064 1496 aaPredicted RBP22.98■■□□□ 1.27
HNRNPU-228ENST00000640306 C11orf95C9JLR9 678 aaPredicted RBP22.98■■□□□ 1.27
HNRNPU-228ENST00000640306 FAM9BQ8IZU0 186 aa22.95■■□□□ 1.27
HNRNPU-228ENST00000640306 KIAA0586Q9BVV6 1533 aa22.95■■□□□ 1.26
HNRNPU-228ENST00000640306 CEP170Q5SW79 1584 aa22.94■■□□□ 1.26
HNRNPU-228ENST00000640306 ZNF644Q9H582 1327 aaPredicted RBP22.93■■□□□ 1.26
HNRNPU-228ENST00000640306 EPRSP07814 1512 aaKnown RBP22.91■■□□□ 1.26
HNRNPU-228ENST00000640306 ARHGEF11O15085 1522 aa22.9■■□□□ 1.26
HNRNPU-228ENST00000640306 NBPF8Q3BBV2 869 aa22.89■■□□□ 1.26
HNRNPU-228ENST00000640306 POLR3GLQ9BT43 218 aa22.87■■□□□ 1.25
HNRNPU-228ENST00000640306 MRS2Q9HD23 443 aa22.86■■□□□ 1.25
HNRNPU-228ENST00000640306 DISP1Q96F81 1524 aa22.86■■□□□ 1.25
HNRNPU-228ENST00000640306 TCOF1Q13428 1488 aaKnown RBP22.86■■□□□ 1.25
HNRNPU-228ENST00000640306 SLC4A1APQ9BWU0 796 aaKnown RBP22.85■■□□□ 1.25
HNRNPU-228ENST00000640306 JPH4Q96JJ6 628 aa22.85■■□□□ 1.25
HNRNPU-228ENST00000640306 HECW1Q76N89 1606 aa22.84■■□□□ 1.25
HNRNPU-228ENST00000640306 SENP3-EIF4A1A0A087X0R7 540 aa22.84■■□□□ 1.25
HNRNPU-228ENST00000640306 ZNF326Q5BKZ1 582 aaKnown RBP22.83■■□□□ 1.25
HNRNPU-228ENST00000640306 PRKRIP1Q9H875 184 aaPredicted RBP22.83■■□□□ 1.25
HNRNPU-228ENST00000640306 NUP160Q12769 1436 aa22.83■■□□□ 1.25
HNRNPU-228ENST00000640306 CNTLNQ9NXG0 1405 aa22.82■■□□□ 1.24
HNRNPU-228ENST00000640306 CCDC7Q96M83 1385 aa22.81■■□□□ 1.24
HNRNPU-228ENST00000640306 GCC2Q8IWJ2 1684 aa22.8■■□□□ 1.24
HNRNPU-228ENST00000640306 KIAA0556O60303 1618 aa22.8■■□□□ 1.24
HNRNPU-228ENST00000640306 ZNF777Q9ULD5 760 aaPredicted RBP22.78■■□□□ 1.24
HNRNPU-228ENST00000640306 CDK11AQ9UQ88 783 aaPredicted RBP22.78■■□□□ 1.24
HNRNPU-228ENST00000640306 MIA2Q96PC5 1412 aa22.77■■□□□ 1.24
HNRNPU-228ENST00000640306 MSH5O43196 834 aa22.76■■□□□ 1.23
HNRNPU-228ENST00000640306 ANKRD30BQ9BXX2 1392 aa22.76■■□□□ 1.23
HNRNPU-228ENST00000640306 KIF7Q2M1P5 1343 aa22.76■■□□□ 1.23
HNRNPU-228ENST00000640306 DAPK1P53355 1430 aa22.75■■□□□ 1.23
HNRNPU-228ENST00000640306 NCOA1Q15788 1441 aa22.75■■□□□ 1.23
HNRNPU-228ENST00000640306 AKNAQ7Z591 1439 aa22.74■■□□□ 1.23
HNRNPU-228ENST00000640306 ABCC5O15440 1437 aa22.73■■□□□ 1.23
HNRNPU-228ENST00000640306 B4GALNT3Q6L9W6 998 aa22.73■■□□□ 1.23
HNRNPU-228ENST00000640306 CHD1O14646 1710 aa22.71■■□□□ 1.23
HNRNPU-228ENST00000640306 RPRD2Q5VT52 1461 aaKnown RBP22.69■■□□□ 1.22
HNRNPU-228ENST00000640306 PLB1Q6P1J6 1458 aa22.69■■□□□ 1.22
HNRNPU-228ENST00000640306 CARMIL2Q6F5E8 1435 aa22.67■■□□□ 1.22
HNRNPU-228ENST00000640306 CFDP1Q9UEE9 299 aaPredicted RBP22.67■■□□□ 1.22
HNRNPU-228ENST00000640306 PPP4R2Q9NY27 417 aa22.66■■□□□ 1.22
HNRNPU-228ENST00000640306 TEX14Q8IWB6 1497 aa22.66■■□□□ 1.22
HNRNPU-228ENST00000640306 PRG4Q92954 1404 aaPredicted RBP22.65■■□□□ 1.22
HNRNPU-228ENST00000640306 NUP153P49790 1475 aaKnown RBP22.64■■□□□ 1.22
HNRNPU-228ENST00000640306 ROCK1Q13464 1354 aa22.63■■□□□ 1.21
HNRNPU-228ENST00000640306 ZBED9Q6R2W3 1325 aa22.62■■□□□ 1.21
HNRNPU-228ENST00000640306 PKD2Q13563 968 aa22.61■■□□□ 1.21
HNRNPU-228ENST00000640306 SPATA31E1Q6ZUB1 1445 aa22.6■■□□□ 1.21
HNRNPU-228ENST00000640306 RAPGEF6Q8TEU7 1601 aa22.6■■□□□ 1.21
HNRNPU-228ENST00000640306 DNMT1P26358 1616 aaKnown RBP22.58■■□□□ 1.21
HNRNPU-228ENST00000640306 ERICH6Q7L0X2 663 aa22.58■■□□□ 1.21
HNRNPU-228ENST00000640306 PZPP20742 1482 aa22.55■■□□□ 1.2
HNRNPU-228ENST00000640306 KDM2AQ9Y2K7 1162 aa22.55■■□□□ 1.2
HNRNPU-228ENST00000640306 USP47Q96K76 1375 aa22.55■■□□□ 1.2
HNRNPU-228ENST00000640306 ERCC6L2Q5T890 1561 aa22.53■■□□□ 1.2
HNRNPU-228ENST00000640306 CAMSAP2Q08AD1 1489 aa22.52■■□□□ 1.2
HNRNPU-228ENST00000640306 FANCIQ9NVI1 1328 aa22.52■■□□□ 1.2
HNRNPU-228ENST00000640306 PTPRGP23470 1445 aa22.52■■□□□ 1.2
HNRNPU-228ENST00000640306 ERICH6BQ5W0A0 696 aa22.5■■□□□ 1.19
HNRNPU-228ENST00000640306 DHX29Q7Z478 1369 aaKnown RBP22.49■■□□□ 1.19
HNRNPU-228ENST00000640306 TROQ12816 1431 aaPredicted RBP22.48■■□□□ 1.19
HNRNPU-228ENST00000640306 CARD11Q9BXL7 1154 aa22.47■■□□□ 1.19
HNRNPU-228ENST00000640306 KIAA1107Q9UPP5 1409 aa22.46■■□□□ 1.19
HNRNPU-228ENST00000640306 GPATCH8Q9UKJ3 1502 aaKnown RBP22.46■■□□□ 1.19
HNRNPU-228ENST00000640306 BCL11AQ9H165 835 aa22.45■■□□□ 1.18
HNRNPU-228ENST00000640306 NUP155O75694 1391 aa22.45■■□□□ 1.18
HNRNPU-228ENST00000640306 KIF14Q15058 1648 aa22.44■■□□□ 1.18
HNRNPU-228ENST00000640306 TMC1Q8TDI8 760 aa22.44■■□□□ 1.18
HNRNPU-228ENST00000640306 BCORL1Q5H9F3 1711 aa22.43■■□□□ 1.18
HNRNPU-228ENST00000640306 SALL2Q9Y467 1007 aaPredicted RBP22.43■■□□□ 1.18
HNRNPU-228ENST00000640306 ABCA8O94911 1581 aa22.43■■□□□ 1.18
HNRNPU-228ENST00000640306 ANKRD30AQ9BXX3 1397 aa22.42■■□□□ 1.18
HNRNPU-228ENST00000640306 ANKRD50Q9ULJ7 1429 aa22.42■■□□□ 1.18
HNRNPU-228ENST00000640306 ATP10BO94823 1461 aa22.41■■□□□ 1.18
HNRNPU-228ENST00000640306 ST20-MTHFSA0A0A6YYL1 179 aa22.41■■□□□ 1.18
HNRNPU-228ENST00000640306 NUDCQ9Y266 331 aa22.41■■□□□ 1.18
HNRNPU-228ENST00000640306 SHROOM2Q13796 1616 aa22.4■■□□□ 1.18
HNRNPU-228ENST00000640306 DCAF11Q8TEB1 546 aa22.4■■□□□ 1.18
HNRNPU-228ENST00000640306 CCDC136Q96JN2 1154 aa22.39■■□□□ 1.17
HNRNPU-228ENST00000640306 PLEKHD1A6NEE1 506 aa22.38■■□□□ 1.17
HNRNPU-228ENST00000640306 HNRNPMP52272 730 aaKnown RBP eCLIP22.38■■□□□ 1.172e-10■■□□□ 11.9
HNRNPU-228ENST00000640306 CLASP1Q7Z460 1538 aa22.38■■□□□ 1.17
HNRNPU-228ENST00000640306 MBD5Q9P267 1494 aa22.38■■□□□ 1.17
HNRNPU-228ENST00000640306 PNISRQ8TF01 805 aaKnown RBP22.36■■□□□ 1.17
HNRNPU-228ENST00000640306 SMG6Q86US8 1419 aaKnown RBP22.36■■□□□ 1.17
HNRNPU-228ENST00000640306 TSPY4P0CV99 314 aa22.35■■□□□ 1.17
HNRNPU-228ENST00000640306 TSPY10P0CW01 314 aa22.35■■□□□ 1.17
HNRNPU-228ENST00000640306 POLR1AO95602 1720 aaPredicted RBP22.33■■□□□ 1.16
HNRNPU-228ENST00000640306 RGL3Q3MIN7 710 aa22.33■■□□□ 1.16
HNRNPU-228ENST00000640306 KDM5CP41229 1560 aa22.3■■□□□ 1.16
HNRNPU-228ENST00000640306 C9orf84Q5VXU9 1444 aa22.3■■□□□ 1.16
HNRNPU-228ENST00000640306 ADGRL2O95490 1459 aa22.29■■□□□ 1.16
HNRNPU-228ENST00000640306 ITSN2Q9NZM3 1697 aa22.29■■□□□ 1.16
HNRNPU-228ENST00000640306 ADGBQ8N7X0 1667 aa22.29■■□□□ 1.16
HNRNPU-228ENST00000640306 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.27■■□□□ 1.154e-10■■□□□ 14
HNRNPU-228ENST00000640306 PAK3O75914 559 aaPredicted RBP22.26■■□□□ 1.15
HNRNPU-228ENST00000640306 NBR1Q14596 966 aa22.26■■□□□ 1.15
HNRNPU-228ENST00000640306 KIF15Q9NS87 1388 aa22.26■■□□□ 1.15
HNRNPU-228ENST00000640306 OSCARQ8IYS5 282 aa22.25■■□□□ 1.15
HNRNPU-228ENST00000640306 ROCK2O75116 1388 aaKnown RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms