RNA–Protein interactions for RNA: ENST00000640227.1

CNTN2-229, Transcript of contactin 2, humanhuman

TSL 5

Gene CNTN2, Length 2,610 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN2-229ENST00000640227 CCDC7Q96M83 1385 aa16.63■□□□□ 0.25
CNTN2-229ENST00000640227 MRC2Q9UBG0 1479 aa16.63■□□□□ 0.25
CNTN2-229ENST00000640227 MIA2Q96PC5 1412 aa16.63■□□□□ 0.25
CNTN2-229ENST00000640227 PBRM1Q86U86 1689 aa16.62■□□□□ 0.25
CNTN2-229ENST00000640227 PRKRIP1Q9H875 184 aaPredicted RBP16.62■□□□□ 0.25
CNTN2-229ENST00000640227 MSH5O43196 834 aa16.62■□□□□ 0.25
CNTN2-229ENST00000640227 MRS2Q9HD23 443 aa16.62■□□□□ 0.25
CNTN2-229ENST00000640227 WDR62O43379 1518 aa16.61■□□□□ 0.25
CNTN2-229ENST00000640227 NCOA1Q15788 1441 aa16.61■□□□□ 0.25
CNTN2-229ENST00000640227 CNGB1Q14028 1251 aaPredicted RBP16.61■□□□□ 0.25
CNTN2-229ENST00000640227 CDK11AQ9UQ88 783 aaPredicted RBP16.6■□□□□ 0.25
CNTN2-229ENST00000640227 ANKRD30BQ9BXX2 1392 aa16.59■□□□□ 0.25
CNTN2-229ENST00000640227 DAPK1P53355 1430 aa16.59■□□□□ 0.25
CNTN2-229ENST00000640227 SLC4A1APQ9BWU0 796 aaKnown RBP16.59■□□□□ 0.25
CNTN2-229ENST00000640227 ADAMTS12P58397 1594 aa16.58■□□□□ 0.24
CNTN2-229ENST00000640227 RPRD2Q5VT52 1461 aaKnown RBP16.57■□□□□ 0.24
CNTN2-229ENST00000640227 ABCC5O15440 1437 aa16.57■□□□□ 0.24
CNTN2-229ENST00000640227 KIF7Q2M1P5 1343 aa16.56■□□□□ 0.24
CNTN2-229ENST00000640227 TEX14Q8IWB6 1497 aa16.55■□□□□ 0.24
CNTN2-229ENST00000640227 FBLN2P98095 1184 aa16.53■□□□□ 0.24
CNTN2-229ENST00000640227 ROCK1Q13464 1354 aa16.53■□□□□ 0.24
CNTN2-229ENST00000640227 B4GALNT3Q6L9W6 998 aa16.53■□□□□ 0.24
CNTN2-229ENST00000640227 POLR3GLQ9BT43 218 aa16.53■□□□□ 0.24
CNTN2-229ENST00000640227 PPP4R2Q9NY27 417 aa16.53■□□□□ 0.24
CNTN2-229ENST00000640227 ZNF326Q5BKZ1 582 aaKnown RBP16.52■□□□□ 0.23
CNTN2-229ENST00000640227 DNMT1P26358 1616 aaKnown RBP16.51■□□□□ 0.23
CNTN2-229ENST00000640227 SPATA31E1Q6ZUB1 1445 aa16.51■□□□□ 0.23
CNTN2-229ENST00000640227 ZBED9Q6R2W3 1325 aa16.5■□□□□ 0.23
CNTN2-229ENST00000640227 SENP3-EIF4A1A0A087X0R7 540 aa16.5■□□□□ 0.23
CNTN2-229ENST00000640227 NUP153P49790 1475 aaKnown RBP16.5■□□□□ 0.23
CNTN2-229ENST00000640227 ZNF777Q9ULD5 760 aaPredicted RBP16.49■□□□□ 0.23
CNTN2-229ENST00000640227 FANCIQ9NVI1 1328 aa16.48■□□□□ 0.23
CNTN2-229ENST00000640227 DISP1Q96F81 1524 aa16.48■□□□□ 0.23
CNTN2-229ENST00000640227 KIAA0556O60303 1618 aa16.47■□□□□ 0.23
CNTN2-229ENST00000640227 ERICH6BQ5W0A0 696 aa16.47■□□□□ 0.23
CNTN2-229ENST00000640227 PRG4Q92954 1404 aaPredicted RBP16.46■□□□□ 0.23
CNTN2-229ENST00000640227 PZPP20742 1482 aa16.46■□□□□ 0.23
CNTN2-229ENST00000640227 CFDP1Q9UEE9 299 aaPredicted RBP16.45■□□□□ 0.22
CNTN2-229ENST00000640227 RAPGEF6Q8TEU7 1601 aa16.44■□□□□ 0.22
CNTN2-229ENST00000640227 ERICH6Q7L0X2 663 aa16.43■□□□□ 0.22
CNTN2-229ENST00000640227 KIAA0586Q9BVV6 1533 aa16.43■□□□□ 0.22
CNTN2-229ENST00000640227 CAMSAP2Q08AD1 1489 aa16.42■□□□□ 0.22
CNTN2-229ENST00000640227 IFT140Q96RY7 1462 aa16.42■□□□□ 0.22
CNTN2-229ENST00000640227 POLR1AO95602 1720 aaPredicted RBP16.42■□□□□ 0.22
CNTN2-229ENST00000640227 PKD2Q13563 968 aa16.42■□□□□ 0.22
CNTN2-229ENST00000640227 BCL11AQ9H165 835 aa16.42■□□□□ 0.22
CNTN2-229ENST00000640227 DHX29Q7Z478 1369 aaKnown RBP16.41■□□□□ 0.22
CNTN2-229ENST00000640227 USP47Q96K76 1375 aa16.41■□□□□ 0.22
CNTN2-229ENST00000640227 BCORL1Q5H9F3 1711 aa16.4■□□□□ 0.22
CNTN2-229ENST00000640227 EIF4G3O43432 1585 aaKnown RBP16.4■□□□□ 0.22
CNTN2-229ENST00000640227 TROQ12816 1431 aaPredicted RBP16.38■□□□□ 0.21
CNTN2-229ENST00000640227 KIAA1107Q9UPP5 1409 aa16.38■□□□□ 0.21
CNTN2-229ENST00000640227 PLB1Q6P1J6 1458 aa16.38■□□□□ 0.21
CNTN2-229ENST00000640227 CHMP7Q8WUX9 453 aaPredicted RBP16.38■□□□□ 0.21
CNTN2-229ENST00000640227 MBD5Q9P267 1494 aa16.37■□□□□ 0.21
CNTN2-229ENST00000640227 GPATCH8Q9UKJ3 1502 aaKnown RBP16.37■□□□□ 0.21
CNTN2-229ENST00000640227 KIF14Q15058 1648 aa16.37■□□□□ 0.21
CNTN2-229ENST00000640227 GRIN2AQ12879 1464 aa16.37■□□□□ 0.21
CNTN2-229ENST00000640227 SMG6Q86US8 1419 aaKnown RBP16.34■□□□□ 0.21
CNTN2-229ENST00000640227 ADGBQ8N7X0 1667 aa16.34■□□□□ 0.21
CNTN2-229ENST00000640227 NUDCQ9Y266 331 aa16.33■□□□□ 0.21
CNTN2-229ENST00000640227 KDM2AQ9Y2K7 1162 aa16.33■□□□□ 0.2
CNTN2-229ENST00000640227 ANKRD30AQ9BXX3 1397 aa16.33■□□□□ 0.2
CNTN2-229ENST00000640227 KDM5CP41229 1560 aa16.32■□□□□ 0.2
CNTN2-229ENST00000640227 ITSN2Q9NZM3 1697 aa16.32■□□□□ 0.2
CNTN2-229ENST00000640227 CARD11Q9BXL7 1154 aa16.32■□□□□ 0.2
CNTN2-229ENST00000640227 ANKRD50Q9ULJ7 1429 aa16.31■□□□□ 0.2
CNTN2-229ENST00000640227 TMC1Q8TDI8 760 aa16.31■□□□□ 0.2
CNTN2-229ENST00000640227 NUP155O75694 1391 aa16.3■□□□□ 0.2
CNTN2-229ENST00000640227 ADGRL2O95490 1459 aa16.3■□□□□ 0.2
CNTN2-229ENST00000640227 PNISRQ8TF01 805 aaKnown RBP16.3■□□□□ 0.2
CNTN2-229ENST00000640227 CROCC2H7BZ55 1655 aa16.29■□□□□ 0.2
CNTN2-229ENST00000640227 CCDC136Q96JN2 1154 aa16.29■□□□□ 0.2
CNTN2-229ENST00000640227 ST20-MTHFSA0A0A6YYL1 179 aa16.28■□□□□ 0.2
CNTN2-229ENST00000640227 CEP170Q5SW79 1584 aa16.27■□□□□ 0.2
CNTN2-229ENST00000640227 DCAF11Q8TEB1 546 aa16.26■□□□□ 0.19
CNTN2-229ENST00000640227 RALGAPBQ86X10 1494 aa16.25■□□□□ 0.19
CNTN2-229ENST00000640227 RNF123Q5XPI4 1314 aa16.25■□□□□ 0.19
CNTN2-229ENST00000640227 ADCY10Q96PN6 1610 aa16.25■□□□□ 0.19
CNTN2-229ENST00000640227 JPH4Q96JJ6 628 aa16.24■□□□□ 0.19
CNTN2-229ENST00000640227 ARID4BQ4LE39 1312 aaPredicted RBP16.24■□□□□ 0.19
CNTN2-229ENST00000640227 C9orf84Q5VXU9 1444 aa16.24■□□□□ 0.19
CNTN2-229ENST00000640227 PLEKHD1A6NEE1 506 aa16.24■□□□□ 0.19
CNTN2-229ENST00000640227 SALL2Q9Y467 1007 aaPredicted RBP16.23■□□□□ 0.19
CNTN2-229ENST00000640227 UHRF1BP1Q6BDS2 1440 aa16.23■□□□□ 0.19
CNTN2-229ENST00000640227 HNRNPMP52272 730 aaKnown RBP eCLIP16.23■□□□□ 0.19
CNTN2-229ENST00000640227 PAK3O75914 559 aaPredicted RBP16.22■□□□□ 0.19
CNTN2-229ENST00000640227 ROCK2O75116 1388 aaKnown RBP16.22■□□□□ 0.19
CNTN2-229ENST00000640227 KIF15Q9NS87 1388 aa16.22■□□□□ 0.19
CNTN2-229ENST00000640227 TSPY4P0CV99 314 aa16.21■□□□□ 0.19
CNTN2-229ENST00000640227 TSPY10P0CW01 314 aa16.21■□□□□ 0.19
CNTN2-229ENST00000640227 CDC42BPAQ5VT25 1732 aa16.21■□□□□ 0.19
CNTN2-229ENST00000640227 CARMIL2Q6F5E8 1435 aa16.21■□□□□ 0.18
CNTN2-229ENST00000640227 NOP58Q9Y2X3 529 aaKnown RBP16.2■□□□□ 0.18
CNTN2-229ENST00000640227 MYBBP1AQ9BQG0 1328 aaKnown RBP16.19■□□□□ 0.18
CNTN2-229ENST00000640227 SYNJ2O15056 1496 aa16.19■□□□□ 0.18
CNTN2-229ENST00000640227 NBR1Q14596 966 aa16.18■□□□□ 0.18
CNTN2-229ENST00000640227 MAGI1Q96QZ7 1491 aaPredicted RBP16.18■□□□□ 0.18
CNTN2-229ENST00000640227 ABCC10Q5T3U5 1492 aa16.18■□□□□ 0.18
CNTN2-229ENST00000640227 ATP10BO94823 1461 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms