RNA–Protein interactions for RNA: ENST00000639943.1

PAX6-261, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-261ENST00000639943 ZNF316A6NFI3 1004 aaPredicted RBP17.88■□□□□ 0.45
PAX6-261ENST00000639943 CFDP1Q9UEE9 299 aaPredicted RBP17.87■□□□□ 0.45
PAX6-261ENST00000639943 DAPK1P53355 1430 aa17.87■□□□□ 0.45
PAX6-261ENST00000639943 CHIC2Q9UKJ5 165 aa17.86■□□□□ 0.45
PAX6-261ENST00000639943 ABCC10Q5T3U5 1492 aa17.86■□□□□ 0.45
PAX6-261ENST00000639943 ABCC2Q92887 1545 aa17.85■□□□□ 0.45
PAX6-261ENST00000639943 ROCK1Q13464 1354 aa17.85■□□□□ 0.45
PAX6-261ENST00000639943 ABCC5O15440 1437 aa17.85■□□□□ 0.45
PAX6-261ENST00000639943 CDC42BPAQ5VT25 1732 aa17.85■□□□□ 0.45
PAX6-261ENST00000639943 RRP7BPQ9NSQ0 103 aa17.85■□□□□ 0.45
PAX6-261ENST00000639943 CAMSAP2Q08AD1 1489 aa17.84■□□□□ 0.45
PAX6-261ENST00000639943 ZNF644Q9H582 1327 aaPredicted RBP17.84■□□□□ 0.45
PAX6-261ENST00000639943 ACIN1Q9UKV3 1341 aaKnown RBP17.81■□□□□ 0.44
PAX6-261ENST00000639943 UHRF1BP1LA0JNW5 1464 aa17.79■□□□□ 0.44
PAX6-261ENST00000639943 TIMELESSQ9UNS1 1208 aa17.78■□□□□ 0.44
PAX6-261ENST00000639943 DIEXFQ68CQ4 756 aaKnown RBP17.78■□□□□ 0.44
PAX6-261ENST00000639943 ZNF777Q9ULD5 760 aaPredicted RBP17.78■□□□□ 0.44
PAX6-261ENST00000639943 CROCC2H7BZ55 1655 aa17.77■□□□□ 0.43
PAX6-261ENST00000639943 ADGBQ8N7X0 1667 aa17.77■□□□□ 0.43
PAX6-261ENST00000639943 SIN3AQ96ST3 1273 aa17.75■□□□□ 0.43
PAX6-261ENST00000639943 KDM6BO15054 1643 aa17.75■□□□□ 0.43
PAX6-261ENST00000639943 NEUROD1Q13562 356 aa17.74■□□□□ 0.43
PAX6-261ENST00000639943 PREX2Q70Z35 1606 aa17.74■□□□□ 0.43
PAX6-261ENST00000639943 ADGRL2O95490 1459 aa17.73■□□□□ 0.43
PAX6-261ENST00000639943 ZCCHC11Q5TAX3 1644 aaKnown RBP17.73■□□□□ 0.43
PAX6-261ENST00000639943 KDM5BQ9UGL1 1544 aa17.73■□□□□ 0.43
PAX6-261ENST00000639943 CDC42BPBQ9Y5S2 1711 aa17.72■□□□□ 0.43
PAX6-261ENST00000639943 TRIM52Q96A61 297 aa17.72■□□□□ 0.43
PAX6-261ENST00000639943 NCOA1Q15788 1441 aa17.71■□□□□ 0.43
PAX6-261ENST00000639943 SHANK2Q9UPX8 1470 aa17.7■□□□□ 0.42
PAX6-261ENST00000639943 ANKRD30AQ9BXX3 1397 aa17.69■□□□□ 0.42
PAX6-261ENST00000639943 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.69■□□□□ 0.42
PAX6-261ENST00000639943 ARHGEF5Q12774 1597 aa17.69■□□□□ 0.42
PAX6-261ENST00000639943 OSCARQ8IYS5 282 aa17.69■□□□□ 0.42
PAX6-261ENST00000639943 TTC37Q6PGP7 1564 aa17.68■□□□□ 0.42
PAX6-261ENST00000639943 MYO5CQ9NQX4 1742 aa17.67■□□□□ 0.42
PAX6-261ENST00000639943 SLC4A1APQ9BWU0 796 aaKnown RBP17.66■□□□□ 0.42
PAX6-261ENST00000639943 SAMD9LQ8IVG5 1584 aa17.66■□□□□ 0.42
PAX6-261ENST00000639943 MPHOSPH9Q99550 1183 aa17.66■□□□□ 0.42
PAX6-261ENST00000639943 TSPY4P0CV99 314 aa17.65■□□□□ 0.42
PAX6-261ENST00000639943 TSPY10P0CW01 314 aa17.65■□□□□ 0.42
PAX6-261ENST00000639943 RSPH4AQ5TD94 716 aa17.65■□□□□ 0.42
PAX6-261ENST00000639943 C9orf84Q5VXU9 1444 aa17.65■□□□□ 0.42
PAX6-261ENST00000639943 DENND4BO75064 1496 aaPredicted RBP17.64■□□□□ 0.41
PAX6-261ENST00000639943 ARHGAP5Q13017 1502 aa17.64■□□□□ 0.41
PAX6-261ENST00000639943 MBD5Q9P267 1494 aa17.64■□□□□ 0.41
PAX6-261ENST00000639943 TONSLQ96HA7 1378 aa17.64■□□□□ 0.41
PAX6-261ENST00000639943 HNRNPMP52272 730 aaKnown RBP eCLIP17.62■□□□□ 0.41
PAX6-261ENST00000639943 KCNH8Q96L42 1107 aa17.62■□□□□ 0.41
PAX6-261ENST00000639943 CCDC141Q6ZP82 1450 aa17.62■□□□□ 0.41
PAX6-261ENST00000639943 PPP1R15AO75807 674 aaPredicted RBP17.62■□□□□ 0.41
PAX6-261ENST00000639943 PLEKHH2Q8IVE3 1493 aa17.61■□□□□ 0.41
PAX6-261ENST00000639943 ANKRD50Q9ULJ7 1429 aa17.59■□□□□ 0.41
PAX6-261ENST00000639943 PLCH2O75038 1416 aa17.59■□□□□ 0.41
PAX6-261ENST00000639943 KIAA1107Q9UPP5 1409 aa17.59■□□□□ 0.41
PAX6-261ENST00000639943 SYCP2Q9BX26 1530 aa17.57■□□□□ 0.4
PAX6-261ENST00000639943 MAST1Q9Y2H9 1570 aa17.56■□□□□ 0.4
PAX6-261ENST00000639943 WDR7Q9Y4E6 1490 aa17.56■□□□□ 0.4
PAX6-261ENST00000639943 PZPP20742 1482 aa17.55■□□□□ 0.4
PAX6-261ENST00000639943 EFCAB2Q5VUJ9 269 aa17.55■□□□□ 0.4
PAX6-261ENST00000639943 KIF15Q9NS87 1388 aa17.54■□□□□ 0.4
PAX6-261ENST00000639943 ARAP3Q8WWN8 1544 aa17.54■□□□□ 0.4
PAX6-261ENST00000639943 ANKRD30BQ9BXX2 1392 aa17.54■□□□□ 0.4
PAX6-261ENST00000639943 FOXD1Q16676 465 aa17.5■□□□□ 0.39
PAX6-261ENST00000639943 KDM5DQ9BY66 1539 aa17.49■□□□□ 0.39
PAX6-261ENST00000639943 ABCC1P33527 1531 aa17.49■□□□□ 0.39
PAX6-261ENST00000639943 PLXNC1O60486 1568 aa17.48■□□□□ 0.39
PAX6-261ENST00000639943 RPRD2Q5VT52 1461 aaKnown RBP17.48■□□□□ 0.39
PAX6-261ENST00000639943 ABCA9Q8IUA7 1624 aa17.48■□□□□ 0.39
PAX6-261ENST00000639943 ARHGEF12Q9NZN5 1544 aa17.48■□□□□ 0.39
PAX6-261ENST00000639943 NPM1P06748 294 aaKnown RBP eCLIP17.47■□□□□ 0.39
PAX6-261ENST00000639943 ASXL2Q76L83 1435 aa17.47■□□□□ 0.39
PAX6-261ENST00000639943 NUP155O75694 1391 aa17.47■□□□□ 0.39
PAX6-261ENST00000639943 PKD2Q13563 968 aa17.44■□□□□ 0.38
PAX6-261ENST00000639943 MIER1Q8N108 512 aa17.44■□□□□ 0.38
PAX6-261ENST00000639943 AMER1Q5JTC6 1135 aaPredicted RBP17.42■□□□□ 0.38
PAX6-261ENST00000639943 DUOX2Q9NRD8 1548 aa17.42■□□□□ 0.38
PAX6-261ENST00000639943 PRKCSHP14314 528 aaPredicted RBP17.41■□□□□ 0.38
PAX6-261ENST00000639943 L3MBTL2Q969R5 705 aa17.41■□□□□ 0.38
PAX6-261ENST00000639943 FANCAO15360 1455 aa17.41■□□□□ 0.38
PAX6-261ENST00000639943 TRAPPC8Q9Y2L5 1435 aa17.41■□□□□ 0.38
PAX6-261ENST00000639943 ZBTB22O15209 634 aa17.4■□□□□ 0.38
PAX6-261ENST00000639943 UNC13BO14795 1591 aa17.4■□□□□ 0.38
PAX6-261ENST00000639943 TEX14Q8IWB6 1497 aa17.4■□□□□ 0.38
PAX6-261ENST00000639943 RTEL1-TNFRSF6BF6WH68 1400 aa17.39■□□□□ 0.37
PAX6-261ENST00000639943 ERBINQ96RT1 1412 aa17.38■□□□□ 0.37
PAX6-261ENST00000639943 FAM135AQ9P2D6 1515 aa17.37■□□□□ 0.37
PAX6-261ENST00000639943 PPP6R1Q9UPN7 881 aa17.37■□□□□ 0.37
PAX6-261ENST00000639943 SPAG9O60271 1321 aaKnown RBP17.37■□□□□ 0.37
PAX6-261ENST00000639943 ADGRL1O94910 1474 aa17.34■□□□□ 0.37
PAX6-261ENST00000639943 ZFYVE16Q7Z3T8 1539 aa17.34■□□□□ 0.37
PAX6-261ENST00000639943 IQGAP3Q86VI3 1631 aa17.33■□□□□ 0.37
PAX6-261ENST00000639943 AFAP1Q8N556 730 aa17.33■□□□□ 0.36
PAX6-261ENST00000639943 ERICH6Q7L0X2 663 aa17.32■□□□□ 0.36
PAX6-261ENST00000639943 MAGI2Q86UL8 1455 aa17.32■□□□□ 0.36
PAX6-261ENST00000639943 CFAP74Q9C0B2 1584 aa17.32■□□□□ 0.36
PAX6-261ENST00000639943 SCAPERQ9BY12 1400 aa17.31■□□□□ 0.36
PAX6-261ENST00000639943 HIRIP3Q9BW71 556 aaPredicted RBP17.31■□□□□ 0.36
PAX6-261ENST00000639943 INO80Q9ULG1 1556 aaPredicted RBP17.3■□□□□ 0.36
PAX6-261ENST00000639943 ATP7AQ04656 1500 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms