RNA–Protein interactions for RNA: ENST00000639658.1

POLR2B-213, Transcript of RNA polymerase II subunit B, humanhuman

TSL 5 BASIC

Gene POLR2B, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-213ENST00000639658 KTN1Q86UP2 1357 aaKnown RBP7.48□□□□□ -1.21
POLR2B-213ENST00000639658 LRPPRCP42704 1394 aaKnown RBP7.48□□□□□ -1.21
POLR2B-213ENST00000639658 PDE4AP27815 886 aa7.47□□□□□ -1.21
POLR2B-213ENST00000639658 PDCL3Q9H2J4 239 aa7.47□□□□□ -1.21
POLR2B-213ENST00000639658 ZMYM3Q14202 1370 aa7.47□□□□□ -1.21
POLR2B-213ENST00000639658 EHMT2Q96KQ7 1210 aa7.47□□□□□ -1.21
POLR2B-213ENST00000639658 VGFO15240 615 aaPredicted RBP7.47□□□□□ -1.21
POLR2B-213ENST00000639658 TPM2P07951 284 aa7.47□□□□□ -1.21
POLR2B-213ENST00000639658 BCL11BQ9C0K0 894 aaPredicted RBP7.47□□□□□ -1.21
POLR2B-213ENST00000639658 PRKRIP1Q9H875 184 aaPredicted RBP7.47□□□□□ -1.21
POLR2B-213ENST00000639658 ISY1Q9ULR0 285 aaKnown RBP7.47□□□□□ -1.21
POLR2B-213ENST00000639658 MIA2Q96PC5 1412 aa7.47□□□□□ -1.21
POLR2B-213ENST00000639658 ARID4BQ4LE39 1312 aaPredicted RBP7.46□□□□□ -1.22
POLR2B-213ENST00000639658 DCAF11Q8TEB1 546 aa7.46□□□□□ -1.22
POLR2B-213ENST00000639658 RRAGDQ9NQL2 400 aaPredicted RBP7.46□□□□□ -1.22
POLR2B-213ENST00000639658 THOC2Q8NI27 1593 aaKnown RBP7.46□□□□□ -1.22
POLR2B-213ENST00000639658 FSD2A1L4K1 749 aa7.45□□□□□ -1.22
POLR2B-213ENST00000639658 KLHL34Q8N239 644 aa7.45□□□□□ -1.22
POLR2B-213ENST00000639658 CCDC7Q96M83 1385 aa7.45□□□□□ -1.22
POLR2B-213ENST00000639658 HSP90AA1P07900 732 aaKnown RBP7.45□□□□□ -1.22
POLR2B-213ENST00000639658 FYCO1Q9BQS8 1478 aa7.44□□□□□ -1.22
POLR2B-213ENST00000639658 PLEKHH2Q8IVE3 1493 aa7.44□□□□□ -1.22
POLR2B-213ENST00000639658 EFCAB5A4FU69 1503 aa7.44□□□□□ -1.22
POLR2B-213ENST00000639658 IPO4Q8TEX9 1081 aaKnown RBP7.44□□□□□ -1.22
POLR2B-213ENST00000639658 PRDM2Q13029 1718 aa7.43□□□□□ -1.22
POLR2B-213ENST00000639658 NCLP19338 710 aaKnown RBP7.43□□□□□ -1.22
POLR2B-213ENST00000639658 DHX29Q7Z478 1369 aaKnown RBP7.43□□□□□ -1.22
POLR2B-213ENST00000639658 MAP7D2Q96T17 732 aa7.43□□□□□ -1.22
POLR2B-213ENST00000639658 UNC13AQ9UPW8 1703 aa7.43□□□□□ -1.22
POLR2B-213ENST00000639658 ARHGEF11O15085 1522 aa7.43□□□□□ -1.22
POLR2B-213ENST00000639658 CUX1P39880 1505 aa7.43□□□□□ -1.22
POLR2B-213ENST00000639658 DENND4BO75064 1496 aaPredicted RBP7.43□□□□□ -1.22
POLR2B-213ENST00000639658 PHLDB1Q86UU1 1377 aa7.43□□□□□ -1.22
POLR2B-213ENST00000639658 TONSLQ96HA7 1378 aa7.42□□□□□ -1.22
POLR2B-213ENST00000639658 IRX6P78412 446 aaPredicted RBP7.42□□□□□ -1.22
POLR2B-213ENST00000639658 CHRM1P11229 460 aaPredicted RBP7.42□□□□□ -1.22
POLR2B-213ENST00000639658 ROCK2O75116 1388 aaKnown RBP7.42□□□□□ -1.22
POLR2B-213ENST00000639658 KIF21AQ7Z4S6 1674 aa7.42□□□□□ -1.22
POLR2B-213ENST00000639658 UTP14CQ5TAP6 766 aaKnown RBP7.42□□□□□ -1.22
POLR2B-213ENST00000639658 BRD2P25440 801 aaKnown RBP7.41□□□□□ -1.22
POLR2B-213ENST00000639658 TCOF1Q13428 1488 aaKnown RBP7.41□□□□□ -1.22
POLR2B-213ENST00000639658 MBD5Q9P267 1494 aa7.41□□□□□ -1.22
POLR2B-213ENST00000639658 PCF11O94913 1555 aaKnown RBP7.41□□□□□ -1.22
POLR2B-213ENST00000639658 GAPVD1Q14C86 1478 aa7.4□□□□□ -1.22
POLR2B-213ENST00000639658 SMAP1Q8IYB5 467 aaPredicted RBP7.4□□□□□ -1.22
POLR2B-213ENST00000639658 TEX14Q8IWB6 1497 aa7.4□□□□□ -1.22
POLR2B-213ENST00000639658 PDE3BQ13370 1112 aa7.4□□□□□ -1.23
POLR2B-213ENST00000639658 CLASP1Q7Z460 1538 aa7.4□□□□□ -1.23
POLR2B-213ENST00000639658 KDM2BQ8NHM5 1336 aa7.39□□□□□ -1.23
POLR2B-213ENST00000639658 NAIPQ13075 1403 aa7.39□□□□□ -1.23
POLR2B-213ENST00000639658 KIF14Q15058 1648 aa7.39□□□□□ -1.23
POLR2B-213ENST00000639658 ARHGAP31Q2M1Z3 1444 aa7.39□□□□□ -1.23
POLR2B-213ENST00000639658 RRP1P56182 461 aaKnown RBP7.39□□□□□ -1.23
POLR2B-213ENST00000639658 SIN3AQ96ST3 1273 aa7.39□□□□□ -1.23
POLR2B-213ENST00000639658 NLRP1Q9C000 1473 aa7.38□□□□□ -1.23
POLR2B-213ENST00000639658 MTERF4Q7Z6M4 381 aaKnown RBP7.38□□□□□ -1.23
POLR2B-213ENST00000639658 PNNQ9H307 717 aaKnown RBP7.38□□□□□ -1.23
POLR2B-213ENST00000639658 A0A0U1RQG5 324 aaPredicted RBP7.38□□□□□ -1.23
POLR2B-213ENST00000639658 HOMEZQ8IX15 550 aa7.38□□□□□ -1.23
POLR2B-213ENST00000639658 LAS1LQ9Y4W2 734 aaKnown RBP7.38□□□□□ -1.23
POLR2B-213ENST00000639658 KDM5CP41229 1560 aa7.38□□□□□ -1.23
POLR2B-213ENST00000639658 FMN1Q68DA7 1419 aa7.37□□□□□ -1.23
POLR2B-213ENST00000639658 FGD6Q6ZV73 1430 aa7.37□□□□□ -1.23
POLR2B-213ENST00000639658 CASKIN1Q8WXD9 1431 aa7.37□□□□□ -1.23
POLR2B-213ENST00000639658 NAP1L2Q9ULW6 460 aaPredicted RBP7.37□□□□□ -1.23
POLR2B-213ENST00000639658 RPRD2Q5VT52 1461 aaKnown RBP7.37□□□□□ -1.23
POLR2B-213ENST00000639658 BRD4O60885 1362 aaPredicted RBP7.36□□□□□ -1.23
POLR2B-213ENST00000639658 GTF2E1P29083 439 aaPredicted RBP7.36□□□□□ -1.23
POLR2B-213ENST00000639658 KIF27Q86VH2 1401 aa7.36□□□□□ -1.23
POLR2B-213ENST00000639658 CCDC184Q52MB2 194 aa7.36□□□□□ -1.23
POLR2B-213ENST00000639658 SHROOM2Q13796 1616 aa7.36□□□□□ -1.23
POLR2B-213ENST00000639658 BLMP54132 1417 aaPredicted RBP7.36□□□□□ -1.23
POLR2B-213ENST00000639658 BCORL1Q5H9F3 1711 aa7.35□□□□□ -1.23
POLR2B-213ENST00000639658 IBTKQ9P2D0 1353 aaPredicted RBP7.35□□□□□ -1.23
POLR2B-213ENST00000639658 FGD5Q6ZNL6 1462 aa7.35□□□□□ -1.23
POLR2B-213ENST00000639658 HSPA5P11021 654 aaKnown RBP7.34□□□□□ -1.23
POLR2B-213ENST00000639658 EIF4G2P78344 907 aaKnown RBP eCLIP7.34□□□□□ -1.23
POLR2B-213ENST00000639658 TEX2Q8IWB9 1127 aa7.34□□□□□ -1.23
POLR2B-213ENST00000639658 BCCIPQ9P287 314 aaKnown RBP eCLIP7.34□□□□□ -1.23
POLR2B-213ENST00000639658 ANTXR1Q9H6X2 564 aa7.34□□□□□ -1.23
POLR2B-213ENST00000639658 STAC3Q96MF2 364 aa7.34□□□□□ -1.24
POLR2B-213ENST00000639658 YEATS2Q9ULM3 1422 aa7.33□□□□□ -1.24
POLR2B-213ENST00000639658 C8orf34Q49A92 452 aa7.33□□□□□ -1.24
POLR2B-213ENST00000639658 SUPT6HQ7KZ85 1726 aaKnown RBP7.33□□□□□ -1.24
POLR2B-213ENST00000639658 LAMC1P11047 1609 aa7.33□□□□□ -1.24
POLR2B-213ENST00000639658 KIAA1107Q9UPP5 1409 aa7.33□□□□□ -1.24
POLR2B-213ENST00000639658 FAM161AQ3B820 660 aa7.33□□□□□ -1.24
POLR2B-213ENST00000639658 PNISRQ8TF01 805 aaKnown RBP7.33□□□□□ -1.24
POLR2B-213ENST00000639658 MRS2Q9HD23 443 aa7.33□□□□□ -1.24
POLR2B-213ENST00000639658 UHRF1BP1Q6BDS2 1440 aa7.32□□□□□ -1.24
POLR2B-213ENST00000639658 LRRIQ1Q96JM4 1722 aa7.32□□□□□ -1.24
POLR2B-213ENST00000639658 FRAT2O75474 233 aaPredicted RBP7.32□□□□□ -1.24
POLR2B-213ENST00000639658 MRE11P49959 708 aa7.32□□□□□ -1.24
POLR2B-213ENST00000639658 PLXNC1O60486 1568 aa7.32□□□□□ -1.24
POLR2B-213ENST00000639658 SNAPC4Q5SXM2 1469 aa7.32□□□□□ -1.24
POLR2B-213ENST00000639658 NAP1L5Q96NT1 182 aaPredicted RBP7.32□□□□□ -1.24
POLR2B-213ENST00000639658 EHBP1L1Q8N3D4 1523 aa7.32□□□□□ -1.24
POLR2B-213ENST00000639658 UGGT2Q9NYU1 1516 aa7.32□□□□□ -1.24
POLR2B-213ENST00000639658 XRCC6P12956 609 aaKnown RBP eCLIP7.31□□□□□ -1.24
POLR2B-213ENST00000639658 HS1BP3Q53T59 392 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms