RNA–Protein interactions for RNA: ENST00000639409.1

PAX6-257, Transcript of paired box 6, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PAX6, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-257ENST00000639409 RTN4Q9NQC3 1192 aaKnown RBP15.88■□□□□ 0.13
PAX6-257ENST00000639409 CDK11AQ9UQ88 783 aaPredicted RBP15.88■□□□□ 0.13
PAX6-257ENST00000639409 DAPK1P53355 1430 aa15.87■□□□□ 0.13
PAX6-257ENST00000639409 AKNAQ7Z591 1439 aa15.87■□□□□ 0.13
PAX6-257ENST00000639409 DENND4BO75064 1496 aaPredicted RBP15.86■□□□□ 0.13
PAX6-257ENST00000639409 ITSN2Q9NZM3 1697 aa15.85■□□□□ 0.13
PAX6-257ENST00000639409 ABCC5O15440 1437 aa15.85■□□□□ 0.13
PAX6-257ENST00000639409 PLPPR3Q6T4P5 718 aa15.85■□□□□ 0.13
PAX6-257ENST00000639409 ATP10BO94823 1461 aa15.83■□□□□ 0.13
PAX6-257ENST00000639409 GPATCH8Q9UKJ3 1502 aaKnown RBP15.83■□□□□ 0.13
PAX6-257ENST00000639409 CAMSAP2Q08AD1 1489 aa15.83■□□□□ 0.12
PAX6-257ENST00000639409 SHROOM2Q13796 1616 aa15.81■□□□□ 0.12
PAX6-257ENST00000639409 CDC42BPAQ5VT25 1732 aa15.81■□□□□ 0.12
PAX6-257ENST00000639409 SCAF1Q9H7N4 1312 aaKnown RBP15.8■□□□□ 0.12
PAX6-257ENST00000639409 ERCC6L2Q5T890 1561 aa15.8■□□□□ 0.12
PAX6-257ENST00000639409 PTPRGP23470 1445 aa15.79■□□□□ 0.12
PAX6-257ENST00000639409 CFDP1Q9UEE9 299 aaPredicted RBP15.78■□□□□ 0.12
PAX6-257ENST00000639409 CROCC2H7BZ55 1655 aa15.78■□□□□ 0.12
PAX6-257ENST00000639409 TIMELESSQ9UNS1 1208 aa15.78■□□□□ 0.12
PAX6-257ENST00000639409 ROCK1Q13464 1354 aa15.78■□□□□ 0.12
PAX6-257ENST00000639409 ABCC10Q5T3U5 1492 aa15.78■□□□□ 0.12
PAX6-257ENST00000639409 ACIN1Q9UKV3 1341 aaKnown RBP15.77■□□□□ 0.12
PAX6-257ENST00000639409 TONSLQ96HA7 1378 aa15.77■□□□□ 0.12
PAX6-257ENST00000639409 PPP1R15AO75807 674 aaPredicted RBP15.77■□□□□ 0.11
PAX6-257ENST00000639409 TRIM52Q96A61 297 aa15.77■□□□□ 0.11
PAX6-257ENST00000639409 YTHDC1Q96MU7 727 aaKnown RBP15.77■□□□□ 0.11
PAX6-257ENST00000639409 KDM5BQ9UGL1 1544 aa15.76■□□□□ 0.11
PAX6-257ENST00000639409 ZNF777Q9ULD5 760 aaPredicted RBP15.76■□□□□ 0.11
PAX6-257ENST00000639409 ADGBQ8N7X0 1667 aa15.75■□□□□ 0.11
PAX6-257ENST00000639409 PLEKHD1A6NEE1 506 aa15.75■□□□□ 0.11
PAX6-257ENST00000639409 FOXD1Q16676 465 aa15.72■□□□□ 0.11
PAX6-257ENST00000639409 MPHOSPH9Q99550 1183 aa15.72■□□□□ 0.11
PAX6-257ENST00000639409 PLEKHG5O94827 1062 aa15.71■□□□□ 0.1
PAX6-257ENST00000639409 HIRIP3Q9BW71 556 aaPredicted RBP15.71■□□□□ 0.1
PAX6-257ENST00000639409 NCOA1Q15788 1441 aa15.7■□□□□ 0.1
PAX6-257ENST00000639409 CENPBP07199 599 aaPredicted RBP15.7■□□□□ 0.1
PAX6-257ENST00000639409 CLASP1Q7Z460 1538 aa15.69■□□□□ 0.1
PAX6-257ENST00000639409 ADGRL2O95490 1459 aa15.69■□□□□ 0.1
PAX6-257ENST00000639409 CDC42BPBQ9Y5S2 1711 aa15.68■□□□□ 0.1
PAX6-257ENST00000639409 PREX2Q70Z35 1606 aa15.66■□□□□ 0.1
PAX6-257ENST00000639409 ABCC2Q92887 1545 aa15.66■□□□□ 0.1
PAX6-257ENST00000639409 TTC37Q6PGP7 1564 aa15.66■□□□□ 0.1
PAX6-257ENST00000639409 PZPP20742 1482 aa15.65■□□□□ 0.1
PAX6-257ENST00000639409 SAMD9LQ8IVG5 1584 aa15.65■□□□□ 0.1
PAX6-257ENST00000639409 SHANK2Q9UPX8 1470 aa15.63■□□□□ 0.09
PAX6-257ENST00000639409 C9orf84Q5VXU9 1444 aa15.63■□□□□ 0.09
PAX6-257ENST00000639409 ANKRD30BQ9BXX2 1392 aa15.63■□□□□ 0.09
PAX6-257ENST00000639409 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.62■□□□□ 0.09
PAX6-257ENST00000639409 ANKRD30AQ9BXX3 1397 aa15.62■□□□□ 0.09
PAX6-257ENST00000639409 DDX10Q13206 875 aaKnown RBP15.61■□□□□ 0.09
PAX6-257ENST00000639409 SLC4A1APQ9BWU0 796 aaKnown RBP15.61■□□□□ 0.09
PAX6-257ENST00000639409 MBD5Q9P267 1494 aa15.61■□□□□ 0.09
PAX6-257ENST00000639409 RPRD2Q5VT52 1461 aaKnown RBP15.6■□□□□ 0.09
PAX6-257ENST00000639409 ARHGEF5Q12774 1597 aa15.6■□□□□ 0.09
PAX6-257ENST00000639409 HNRNPMP52272 730 aaKnown RBP eCLIP15.6■□□□□ 0.09
PAX6-257ENST00000639409 ANKRD50Q9ULJ7 1429 aa15.6■□□□□ 0.09
PAX6-257ENST00000639409 ZCCHC11Q5TAX3 1644 aaKnown RBP15.59■□□□□ 0.09
PAX6-257ENST00000639409 TEX14Q8IWB6 1497 aa15.59■□□□□ 0.09
PAX6-257ENST00000639409 L3MBTL2Q969R5 705 aa15.58■□□□□ 0.08
PAX6-257ENST00000639409 GTF3C3Q9Y5Q9 886 aa15.58■□□□□ 0.08
PAX6-257ENST00000639409 SYCP2Q9BX26 1530 aa15.57■□□□□ 0.08
PAX6-257ENST00000639409 MYO5CQ9NQX4 1742 aa15.57■□□□□ 0.08
PAX6-257ENST00000639409 ARHGAP5Q13017 1502 aa15.57■□□□□ 0.08
PAX6-257ENST00000639409 CCDC141Q6ZP82 1450 aa15.56■□□□□ 0.08
PAX6-257ENST00000639409 KLHL34Q8N239 644 aa15.55■□□□□ 0.08
PAX6-257ENST00000639409 KCNH8Q96L42 1107 aa15.54■□□□□ 0.08
PAX6-257ENST00000639409 KIF15Q9NS87 1388 aa15.54■□□□□ 0.08
PAX6-257ENST00000639409 TSPY4P0CV99 314 aa15.53■□□□□ 0.08
PAX6-257ENST00000639409 TSPY10P0CW01 314 aa15.53■□□□□ 0.08
PAX6-257ENST00000639409 KIAA1107Q9UPP5 1409 aa15.53■□□□□ 0.08
PAX6-257ENST00000639409 UHRF1BP1LA0JNW5 1464 aa15.52■□□□□ 0.08
PAX6-257ENST00000639409 PKD2Q13563 968 aa15.51■□□□□ 0.07
PAX6-257ENST00000639409 NUP155O75694 1391 aa15.5■□□□□ 0.07
PAX6-257ENST00000639409 NBPF8Q3BBV2 869 aa15.5■□□□□ 0.07
PAX6-257ENST00000639409 KDM5DQ9BY66 1539 aa15.5■□□□□ 0.07
PAX6-257ENST00000639409 PODXL2Q9NZ53 605 aa15.5■□□□□ 0.07
PAX6-257ENST00000639409 HSPA5P11021 654 aaKnown RBP15.49■□□□□ 0.07
PAX6-257ENST00000639409 UBE2Q2Q8WVN8 375 aa15.49■□□□□ 0.07
PAX6-257ENST00000639409 ARHGEF12Q9NZN5 1544 aa15.49■□□□□ 0.07
PAX6-257ENST00000639409 MAST1Q9Y2H9 1570 aa15.48■□□□□ 0.07
PAX6-257ENST00000639409 PLCH2O75038 1416 aa15.45■□□□□ 0.06
PAX6-257ENST00000639409 AMER1Q5JTC6 1135 aaPredicted RBP15.45■□□□□ 0.06
PAX6-257ENST00000639409 WASHC2AQ641Q2 1341 aa15.45■□□□□ 0.06
PAX6-257ENST00000639409 PLXNC1O60486 1568 aa15.44■□□□□ 0.06
PAX6-257ENST00000639409 FAM135AQ9P2D6 1515 aa15.44■□□□□ 0.06
PAX6-257ENST00000639409 EIF4G2P78344 907 aaKnown RBP eCLIP15.43■□□□□ 0.06
PAX6-257ENST00000639409 ABCC1P33527 1531 aa15.43■□□□□ 0.06
PAX6-257ENST00000639409 RSPH4AQ5TD94 716 aa15.43■□□□□ 0.06
PAX6-257ENST00000639409 UNC13BO14795 1591 aa15.42■□□□□ 0.06
PAX6-257ENST00000639409 PLEKHH2Q8IVE3 1493 aa15.42■□□□□ 0.06
PAX6-257ENST00000639409 HOMEZQ8IX15 550 aa15.41■□□□□ 0.06
PAX6-257ENST00000639409 C11orf95C9JLR9 678 aaPredicted RBP15.4■□□□□ 0.06
PAX6-257ENST00000639409 SPATA31E1Q6ZUB1 1445 aa15.39■□□□□ 0.05
PAX6-257ENST00000639409 TRAPPC8Q9Y2L5 1435 aa15.39■□□□□ 0.05
PAX6-257ENST00000639409 WDR7Q9Y4E6 1490 aa15.39■□□□□ 0.05
PAX6-257ENST00000639409 ANP32CO43423 234 aa15.38■□□□□ 0.05
PAX6-257ENST00000639409 ZNF326Q5BKZ1 582 aaKnown RBP15.37■□□□□ 0.05
PAX6-257ENST00000639409 EFCAB2Q5VUJ9 269 aa15.36■□□□□ 0.05
PAX6-257ENST00000639409 POLR1AO95602 1720 aaPredicted RBP15.36■□□□□ 0.05
PAX6-257ENST00000639409 DUOX2Q9NRD8 1548 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms