RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 NOP58Q9Y2X3 529 aaKnown RBP5.62□□□□□ -1.51
SCN3A-209ENST00000639244 E9PSI1 815 aa5.61□□□□□ -1.51
SCN3A-209ENST00000639244 SSR1P43307 286 aaKnown RBP5.61□□□□□ -1.51
SCN3A-209ENST00000639244 HMGB1P1B2RPK0 211 aaPredicted RBP5.61□□□□□ -1.51
SCN3A-209ENST00000639244 CCDC27Q2M243 656 aa5.61□□□□□ -1.51
SCN3A-209ENST00000639244 FAM9BQ8IZU0 186 aa5.61□□□□□ -1.51
SCN3A-209ENST00000639244 CENPJQ9HC77 1338 aaPredicted RBP5.61□□□□□ -1.51
SCN3A-209ENST00000639244 NRDCO43847 1150 aa5.61□□□□□ -1.51
SCN3A-209ENST00000639244 MAP7D2Q96T17 732 aa5.6□□□□□ -1.51
SCN3A-209ENST00000639244 KDM4AO75164 1064 aa5.59□□□□□ -1.51
SCN3A-209ENST00000639244 PLEKHD1A6NEE1 506 aa5.59□□□□□ -1.51
SCN3A-209ENST00000639244 CALRP27797 417 aaKnown RBP5.59□□□□□ -1.51
SCN3A-209ENST00000639244 PLCD3Q8N3E9 789 aa5.59□□□□□ -1.51
SCN3A-209ENST00000639244 PNNQ9H307 717 aaKnown RBP5.59□□□□□ -1.51
SCN3A-209ENST00000639244 PDCL3Q9H2J4 239 aa5.59□□□□□ -1.52
SCN3A-209ENST00000639244 TTC36A6NLP5 189 aa5.58□□□□□ -1.52
SCN3A-209ENST00000639244 HSP90AB3PQ58FF7 597 aa5.57□□□□□ -1.52
SCN3A-209ENST00000639244 ANP32CO43423 234 aa5.57□□□□□ -1.52
SCN3A-209ENST00000639244 RGS3P49796 1198 aa5.57□□□□□ -1.52
SCN3A-209ENST00000639244 MTERF4Q7Z6M4 381 aaKnown RBP5.57□□□□□ -1.52
SCN3A-209ENST00000639244 NISCHQ9Y2I1 1504 aa5.57□□□□□ -1.52
SCN3A-209ENST00000639244 ZNF692Q9BU19 519 aaPredicted RBP5.56□□□□□ -1.52
SCN3A-209ENST00000639244 EXOC8Q8IYI6 725 aa5.56□□□□□ -1.52
SCN3A-209ENST00000639244 NOL8Q76FK4 1167 aaKnown RBP5.56□□□□□ -1.52
SCN3A-209ENST00000639244 NECTIN2Q92692 538 aa5.56□□□□□ -1.52
SCN3A-209ENST00000639244 MYH16Q9H6N6 1097 aa5.56□□□□□ -1.52
SCN3A-209ENST00000639244 AEBP1Q8IUX7 1158 aa5.55□□□□□ -1.52
SCN3A-209ENST00000639244 NBPF20Q3BBV1 942 aa5.55□□□□□ -1.52
SCN3A-209ENST00000639244 TMCO4Q5TGY1 634 aa5.55□□□□□ -1.52
SCN3A-209ENST00000639244 FAM43BQ6ZT52 329 aaPredicted RBP5.55□□□□□ -1.52
SCN3A-209ENST00000639244 RALBP1Q15311 655 aa5.55□□□□□ -1.52
SCN3A-209ENST00000639244 SETD1BQ9UPS6 1966 aaKnown RBP5.54□□□□□ -1.52
SCN3A-209ENST00000639244 GOLGA6L3A6NEY3 463 aa5.54□□□□□ -1.52
SCN3A-209ENST00000639244 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.54□□□□□ -1.52
SCN3A-209ENST00000639244 TERF2IPQ9NYB0 399 aa5.54□□□□□ -1.52
SCN3A-209ENST00000639244 NBPF11Q86T75 865 aa5.54□□□□□ -1.52
SCN3A-209ENST00000639244 MTMR7Q9Y216 660 aa5.54□□□□□ -1.52
SCN3A-209ENST00000639244 MAPK8IP2Q13387 824 aaPredicted RBP5.53□□□□□ -1.52
SCN3A-209ENST00000639244 NBPF1Q3BBV0 1214 aa5.53□□□□□ -1.52
SCN3A-209ENST00000639244 ZNF428Q96B54 188 aa5.53□□□□□ -1.52
SCN3A-209ENST00000639244 TCERG1O14776 1098 aaKnown RBP5.53□□□□□ -1.52
SCN3A-209ENST00000639244 KCNG1Q9UIX4 513 aa5.53□□□□□ -1.52
SCN3A-209ENST00000639244 FOXD4L5Q5VV16 416 aaPredicted RBP5.53□□□□□ -1.52
SCN3A-209ENST00000639244 FOXD4L4Q8WXT5 416 aaPredicted RBP5.53□□□□□ -1.52
SCN3A-209ENST00000639244 SOX12O15370 315 aa5.52□□□□□ -1.53
SCN3A-209ENST00000639244 KIF20AO95235 890 aa5.52□□□□□ -1.53
SCN3A-209ENST00000639244 GORABQ5T7V8 394 aa5.52□□□□□ -1.53
SCN3A-209ENST00000639244 TMTC2Q8N394 836 aa5.52□□□□□ -1.53
SCN3A-209ENST00000639244 MRVI1Q9Y6F6 885 aa5.52□□□□□ -1.53
SCN3A-209ENST00000639244 ARID4AP29374 1257 aaPredicted RBP5.52□□□□□ -1.53
SCN3A-209ENST00000639244 TRIM41Q8WV44 630 aa5.52□□□□□ -1.53
SCN3A-209ENST00000639244 TPM2P07951 284 aa5.51□□□□□ -1.53
SCN3A-209ENST00000639244 LOC102724159A0A0B4J2E5 919 aa5.51□□□□□ -1.53
SCN3A-209ENST00000639244 APBB1O00213 710 aa5.51□□□□□ -1.53
SCN3A-209ENST00000639244 MSH5O43196 834 aa5.51□□□□□ -1.53
SCN3A-209ENST00000639244 PWP2Q15269 919 aaKnown RBP5.51□□□□□ -1.53
SCN3A-209ENST00000639244 GOLIM4O00461 696 aa5.51□□□□□ -1.53
SCN3A-209ENST00000639244 MMP14P50281 582 aa5.51□□□□□ -1.53
SCN3A-209ENST00000639244 SMAP1Q8IYB5 467 aaPredicted RBP5.51□□□□□ -1.53
SCN3A-209ENST00000639244 ITGAEP38570 1179 aa5.51□□□□□ -1.53
SCN3A-209ENST00000639244 TSPYL1Q9H0U9 437 aa5.5□□□□□ -1.53
SCN3A-209ENST00000639244 ZBTB47Q9UFB7 747 aaPredicted RBP5.5□□□□□ -1.53
SCN3A-209ENST00000639244 HDAC1Q13547 482 aaPredicted RBP5.5□□□□□ -1.53
SCN3A-209ENST00000639244 SPTY2D1Q68D10 685 aaPredicted RBP5.5□□□□□ -1.53
SCN3A-209ENST00000639244 RBM28Q9NW13 759 aaKnown RBP5.5□□□□□ -1.53
SCN3A-209ENST00000639244 NBPF6Q5VWK0 638 aa5.5□□□□□ -1.53
SCN3A-209ENST00000639244 NBPF5PQ86XG9 351 aaPredicted RBP5.5□□□□□ -1.53
SCN3A-209ENST00000639244 NBPF4Q96M43 638 aa5.5□□□□□ -1.53
SCN3A-209ENST00000639244 TSHZ1Q6ZSZ6 1077 aa5.49□□□□□ -1.53
SCN3A-209ENST00000639244 PRDM4Q9UKN5 801 aa5.49□□□□□ -1.53
SCN3A-209ENST00000639244 MYO15BQ96JP2 1530 aa5.49□□□□□ -1.53
SCN3A-209ENST00000639244 MYCNP04198 464 aaPredicted RBP5.49□□□□□ -1.53
SCN3A-209ENST00000639244 VGLL3A8MV65 326 aa5.48□□□□□ -1.53
SCN3A-209ENST00000639244 PPP4R3BQ5MIZ7 849 aa5.48□□□□□ -1.53
SCN3A-209ENST00000639244 RINLQ6ZS11 566 aa5.48□□□□□ -1.53
SCN3A-209ENST00000639244 NBPF9Q3BBW0 867 aa5.48□□□□□ -1.53
SCN3A-209ENST00000639244 WDR78Q5VTH9 848 aa5.48□□□□□ -1.53
SCN3A-209ENST00000639244 GEMIN8Q9NWZ8 242 aaKnown RBP5.48□□□□□ -1.53
SCN3A-209ENST00000639244 FOXD4L6Q3SYB3 417 aaPredicted RBP5.48□□□□□ -1.53
SCN3A-209ENST00000639244 FOXD4L3Q6VB84 417 aaPredicted RBP5.48□□□□□ -1.53
SCN3A-209ENST00000639244 ARID3CA6NKF2 412 aa5.47□□□□□ -1.53
SCN3A-209ENST00000639244 UTP14CQ5TAP6 766 aaKnown RBP5.47□□□□□ -1.53
SCN3A-209ENST00000639244 GSE1Q14687 1217 aa5.47□□□□□ -1.53
SCN3A-209ENST00000639244 UNC13AQ9UPW8 1703 aa5.47□□□□□ -1.53
SCN3A-209ENST00000639244 ANKRD13AQ8IZ07 590 aa5.47□□□□□ -1.53
SCN3A-209ENST00000639244 DDRGK1Q96HY6 314 aa5.47□□□□□ -1.53
SCN3A-209ENST00000639244 ZBTB22O15209 634 aa5.46□□□□□ -1.53
SCN3A-209ENST00000639244 MAP2K1Q02750 393 aaPredicted RBP5.46□□□□□ -1.54
SCN3A-209ENST00000639244 EGFL6Q8IUX8 553 aa5.46□□□□□ -1.54
SCN3A-209ENST00000639244 OTUD6BQ8N6M0 293 aa5.46□□□□□ -1.54
SCN3A-209ENST00000639244 PAIP2Q9BPZ3 127 aaKnown RBP5.46□□□□□ -1.54
SCN3A-209ENST00000639244 YY1AP1Q9H869 796 aa5.46□□□□□ -1.54
SCN3A-209ENST00000639244 LETM1O95202 739 aaPredicted RBP5.46□□□□□ -1.54
SCN3A-209ENST00000639244 SPRYD3Q8NCJ5 442 aa5.46□□□□□ -1.54
SCN3A-209ENST00000639244 MFAP1P55081 439 aaKnown RBP5.45□□□□□ -1.54
SCN3A-209ENST00000639244 NEUROD2Q15784 382 aa5.45□□□□□ -1.54
SCN3A-209ENST00000639244 BANK1Q8NDB2 785 aa5.45□□□□□ -1.54
SCN3A-209ENST00000639244 ZHX1Q9UKY1 873 aaPredicted RBP5.45□□□□□ -1.54
SCN3A-209ENST00000639244 WASHC2CQ9Y4E1 1318 aa5.45□□□□□ -1.54
SCN3A-209ENST00000639244 ARMCX6Q7L4S7 300 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms