RNA–Protein interactions for RNA: ENST00000639121.1

RMST-208, rhabdomyosarcoma 2 associated transcript, human

TSL 5

Gene RMST, Length 2,099 nt, Biotype lincRNA, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RMST-208	ENST00000639121	TMED8	Q6PL24	325 aa	Predicted RBP	8.06	□□□□□ -1.12
RMST-208	ENST00000639121	CFAP44	Q96MT7	982 aa		8.06	□□□□□ -1.12
RMST-208	ENST00000639121	PATL2	C9JE40	543 aa	Known RBP	8.05	□□□□□ -1.12
RMST-208	ENST00000639121	FAM43B	Q6ZT52	329 aa	Predicted RBP	8.05	□□□□□ -1.12
RMST-208	ENST00000639121	PPP4R3B	Q5MIZ7	849 aa		8.04	□□□□□ -1.12
RMST-208	ENST00000639121	KIF20A	O95235	890 aa		8.03	□□□□□ -1.12
RMST-208	ENST00000639121	PSEN1	P49768	467 aa		8.03	□□□□□ -1.12
RMST-208	ENST00000639121	TNNT2	P45379	298 aa	Predicted RBP	8.02	□□□□□ -1.12
RMST-208	ENST00000639121	DMTN	Q08495	405 aa		8.02	□□□□□ -1.12
RMST-208	ENST00000639121	VGLL3	A8MV65	326 aa		8.01	□□□□□ -1.13
RMST-208	ENST00000639121	APP	P05067	770 aa		8.01	□□□□□ -1.13
RMST-208	ENST00000639121	FRAT1	Q92837	279 aa	Predicted RBP	8.01	□□□□□ -1.13
RMST-208	ENST00000639121	TRIM44	Q96DX7	344 aa	Predicted RBP	8.01	□□□□□ -1.13
RMST-208	ENST00000639121	SLC20A2	Q08357	652 aa		8.01	□□□□□ -1.13
RMST-208	ENST00000639121	SLC52A1	Q9NWF4	448 aa		8.01	□□□□□ -1.13
RMST-208	ENST00000639121	MTERF4	Q7Z6M4	381 aa	Known RBP	7.99	□□□□□ -1.13
RMST-208	ENST00000639121	CEP120	Q8N960	986 aa		7.99	□□□□□ -1.13
RMST-208	ENST00000639121	DCAF11	Q8TEB1	546 aa		7.99	□□□□□ -1.13
RMST-208	ENST00000639121	PPP4R2	Q9NY27	417 aa		7.99	□□□□□ -1.13
RMST-208	ENST00000639121	ZHX1	Q9UKY1	873 aa	Predicted RBP	7.99	□□□□□ -1.13
RMST-208	ENST00000639121	DNAJC2	Q99543	621 aa	Known RBP	7.98	□□□□□ -1.13
RMST-208	ENST00000639121	CC2D2B	Q6DHV5	1058 aa		7.98	□□□□□ -1.13
RMST-208	ENST00000639121	MYCN	P04198	464 aa	Predicted RBP	7.97	□□□□□ -1.13
RMST-208	ENST00000639121	DNTTIP2	Q5QJE6	756 aa	Known RBP	7.96	□□□□□ -1.13
RMST-208	ENST00000639121	YY1AP1	Q9H869	796 aa		7.96	□□□□□ -1.13
RMST-208	ENST00000639121	LETM1	O95202	739 aa	Predicted RBP	7.96	□□□□□ -1.14
RMST-208	ENST00000639121	GTPBP4	Q9BZE4	634 aa	Known RBP	7.96	□□□□□ -1.14
RMST-208	ENST00000639121	GOLGA6L3	A6NEY3	463 aa		7.95	□□□□□ -1.14
RMST-208	ENST00000639121	NBPF20	Q3BBV1	942 aa		7.95	□□□□□ -1.14
RMST-208	ENST00000639121	CC2D1B	Q5T0F9	858 aa	Known RBP	7.95	□□□□□ -1.14
RMST-208	ENST00000639121	CERS3	Q8IU89	383 aa		7.95	□□□□□ -1.14
RMST-208	ENST00000639121	PRDM16	Q9HAZ2	1276 aa		7.95	□□□□□ -1.14
RMST-208	ENST00000639121	L1TD1	Q5T7N2	865 aa	Known RBP	7.94	□□□□□ -1.14
RMST-208	ENST00000639121	CARD10	Q9BWT7	1032 aa		7.94	□□□□□ -1.14
RMST-208	ENST00000639121	TERF1	P54274	439 aa		7.94	□□□□□ -1.14
RMST-208	ENST00000639121	GEMIN8	Q9NWZ8	242 aa	Known RBP	7.94	□□□□□ -1.14
RMST-208	ENST00000639121	ANAPC15	P60006	121 aa		7.93	□□□□□ -1.14
RMST-208	ENST00000639121	OS9	Q13438	667 aa	Predicted RBP	7.93	□□□□□ -1.14
RMST-208	ENST00000639121	RALBP1	Q15311	655 aa		7.93	□□□□□ -1.14
RMST-208	ENST00000639121	LAS1L	Q9Y4W2	734 aa	Known RBP	7.93	□□□□□ -1.14
RMST-208	ENST00000639121	MAFG	O15525	162 aa		7.93	□□□□□ -1.14
RMST-208	ENST00000639121	GPATCH11	Q8N954	259 aa		7.93	□□□□□ -1.14
RMST-208	ENST00000639121	EGFL6	Q8IUX8	553 aa		7.92	□□□□□ -1.14
RMST-208	ENST00000639121	SOX12	O15370	315 aa		7.91	□□□□□ -1.14
RMST-208	ENST00000639121	MAPK8IP2	Q13387	824 aa	Predicted RBP	7.91	□□□□□ -1.14
RMST-208	ENST00000639121	ZSCAN20	P17040	1043 aa	Predicted RBP	7.9	□□□□□ -1.14
RMST-208	ENST00000639121	NFKBIB	Q15653	356 aa		7.9	□□□□□ -1.14
RMST-208	ENST00000639121	TCERG1	O14776	1098 aa	Known RBP	7.89	□□□□□ -1.15
RMST-208	ENST00000639121	EEA1	Q15075	1411 aa		7.89	□□□□□ -1.15
RMST-208	ENST00000639121	NBPF11	Q86T75	865 aa		7.88	□□□□□ -1.15
RMST-208	ENST00000639121	NBPF1	Q3BBV0	1214 aa		7.88	□□□□□ -1.15
RMST-208	ENST00000639121	TTC36	A6NLP5	189 aa		7.87	□□□□□ -1.15
RMST-208	ENST00000639121	HSP90AB3P	Q58FF7	597 aa		7.87	□□□□□ -1.15
RMST-208	ENST00000639121	SH3BP1	Q9Y3L3	701 aa		7.87	□□□□□ -1.15
RMST-208	ENST00000639121		E9PSI1	815 aa		7.85	□□□□□ -1.15
RMST-208	ENST00000639121	NGEF	Q8N5V2	710 aa		7.85	□□□□□ -1.15
RMST-208	ENST00000639121	CWC22	Q9HCG8	908 aa	Known RBP	7.85	□□□□□ -1.15
RMST-208	ENST00000639121	ZNF526	Q8TF50	670 aa	Predicted RBP	7.85	□□□□□ -1.15
RMST-208	ENST00000639121	ZNF692	Q9BU19	519 aa	Predicted RBP	7.83	□□□□□ -1.16
RMST-208	ENST00000639121	CCER2	I3L3R5	266 aa		7.83	□□□□□ -1.16
RMST-208	ENST00000639121	CCDC94	Q9BW85	323 aa	Predicted RBP	7.82	□□□□□ -1.16
RMST-208	ENST00000639121	RIPK4	P57078	832 aa		7.82	□□□□□ -1.16
RMST-208	ENST00000639121	IRX5	P78411	483 aa	Predicted RBP	7.82	□□□□□ -1.16
RMST-208	ENST00000639121	NBPF9	Q3BBW0	867 aa		7.82	□□□□□ -1.16
RMST-208	ENST00000639121	KIAA1211	Q6ZU35	1233 aa		7.81	□□□□□ -1.16
RMST-208	ENST00000639121	TSPYL1	Q9H0U9	437 aa		7.81	□□□□□ -1.16
RMST-208	ENST00000639121	PLEKHD1	A6NEE1	506 aa		7.8	□□□□□ -1.16
RMST-208	ENST00000639121	ESPN	B1AK53	854 aa		7.8	□□□□□ -1.16
RMST-208	ENST00000639121	KCNH8	Q96L42	1107 aa		7.8	□□□□□ -1.16
RMST-208	ENST00000639121	IRF6	O14896	467 aa		7.8	□□□□□ -1.16
RMST-208	ENST00000639121	SEMA3F	Q13275	785 aa		7.8	□□□□□ -1.16
RMST-208	ENST00000639121	BANK1	Q8NDB2	785 aa		7.8	□□□□□ -1.16
RMST-208	ENST00000639121	RAI14	Q9P0K7	980 aa		7.8	□□□□□ -1.16
RMST-208	ENST00000639121	SATB1	Q01826	763 aa		7.79	□□□□□ -1.16
RMST-208	ENST00000639121	MAP2K1	Q02750	393 aa	Predicted RBP	7.79	□□□□□ -1.16
RMST-208	ENST00000639121	LMOD3	Q0VAK6	560 aa		7.79	□□□□□ -1.16
RMST-208	ENST00000639121	CASC1	Q6TDU7	716 aa		7.79	□□□□□ -1.16
RMST-208	ENST00000639121	AEBP1	Q8IUX7	1158 aa		7.79	□□□□□ -1.16
RMST-208	ENST00000639121	EFCC1	Q9HA90	598 aa		7.79	□□□□□ -1.16
RMST-208	ENST00000639121	NCAPD3	P42695	1498 aa		7.78	□□□□□ -1.16
RMST-208	ENST00000639121	P3H3	Q8IVL6	736 aa		7.78	□□□□□ -1.16
RMST-208	ENST00000639121	OTUD6B	Q8N6M0	293 aa		7.78	□□□□□ -1.16
RMST-208	ENST00000639121	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	7.78	□□□□□ -1.16
RMST-208	ENST00000639121	ZCCHC6	Q5VYS8	1495 aa	Known RBP	7.78	□□□□□ -1.16
RMST-208	ENST00000639121	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	7.77	□□□□□ -1.17
RMST-208	ENST00000639121	FAM13B	Q9NYF5	915 aa		7.77	□□□□□ -1.17
RMST-208	ENST00000639121	CCDC27	Q2M243	656 aa		7.77	□□□□□ -1.17
RMST-208	ENST00000639121	BSDC1	Q9NW68	430 aa	Predicted RBP	7.77	□□□□□ -1.17
RMST-208	ENST00000639121	CGN	Q9P2M7	1197 aa	Known RBP	7.77	□□□□□ -1.17
RMST-208	ENST00000639121	DYNC1I1	O14576	645 aa		7.76	□□□□□ -1.17
RMST-208	ENST00000639121	ZBTB22	O15209	634 aa		7.76	□□□□□ -1.17
RMST-208	ENST00000639121	ZNF500	O60304	480 aa	Predicted RBP	7.76	□□□□□ -1.17
RMST-208	ENST00000639121	OFD1	O75665	1012 aa		7.76	□□□□□ -1.17
RMST-208	ENST00000639121	B4GALNT3	Q6L9W6	998 aa		7.76	□□□□□ -1.17
RMST-208	ENST00000639121	NBPF10	Q6P3W6	841 aa	Known RBP	7.76	□□□□□ -1.17
RMST-208	ENST00000639121	TERF2IP	Q9NYB0	399 aa		7.76	□□□□□ -1.17
RMST-208	ENST00000639121	TRH	P20396	242 aa	Predicted RBP	7.75	□□□□□ -1.17
RMST-208	ENST00000639121	SSR1	P43307	286 aa	Known RBP	7.75	□□□□□ -1.17
RMST-208	ENST00000639121	GOLIM4	O00461	696 aa		7.75	□□□□□ -1.17
RMST-208	ENST00000639121	PRR29	P0C7W0	189 aa		7.75	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms