RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 ABCC10Q5T3U5 1492 aa15.68■□□□□ 0.1
TARDBP-230ENST00000639083 DNMT1P26358 1616 aaKnown RBP15.67■□□□□ 0.1
TARDBP-230ENST00000639083 ITSN2Q9NZM3 1697 aa15.66■□□□□ 0.1
TARDBP-230ENST00000639083 ROCK1Q13464 1354 aa15.66■□□□□ 0.1
TARDBP-230ENST00000639083 TRIM52Q96A61 297 aa15.66■□□□□ 0.1
TARDBP-230ENST00000639083 ABCC2Q92887 1545 aa15.65■□□□□ 0.1
TARDBP-230ENST00000639083 KDM6BO15054 1643 aa15.64■□□□□ 0.09
TARDBP-230ENST00000639083 GCC2Q8IWJ2 1684 aa15.64■□□□□ 0.09
TARDBP-230ENST00000639083 TIMELESSQ9UNS1 1208 aa15.62■□□□□ 0.09
TARDBP-230ENST00000639083 CDC42BPAQ5VT25 1732 aa15.62■□□□□ 0.09
TARDBP-230ENST00000639083 KCNH8Q96L42 1107 aa15.6■□□□□ 0.09
TARDBP-230ENST00000639083 NCOA1Q15788 1441 aa15.6■□□□□ 0.09
TARDBP-230ENST00000639083 MPHOSPH9Q99550 1183 aa15.59■□□□□ 0.09
TARDBP-230ENST00000639083 HNRNPMP52272 730 aaKnown RBP eCLIP15.59■□□□□ 0.097e-7■■□□□ 12.4
TARDBP-230ENST00000639083 UHRF1BP1LA0JNW5 1464 aa15.58■□□□□ 0.08
TARDBP-230ENST00000639083 OSCARQ8IYS5 282 aa15.57■□□□□ 0.08
TARDBP-230ENST00000639083 DENND4BO75064 1496 aaPredicted RBP15.57■□□□□ 0.08
TARDBP-230ENST00000639083 PPP1R15AO75807 674 aaPredicted RBP15.56■□□□□ 0.08
TARDBP-230ENST00000639083 TSPY4P0CV99 314 aa15.55■□□□□ 0.08
TARDBP-230ENST00000639083 TSPY10P0CW01 314 aa15.55■□□□□ 0.08
TARDBP-230ENST00000639083 ANKRD30AQ9BXX3 1397 aa15.55■□□□□ 0.08
TARDBP-230ENST00000639083 KDM5BQ9UGL1 1544 aa15.55■□□□□ 0.08
TARDBP-230ENST00000639083 ACIN1Q9UKV3 1341 aaKnown RBP15.54■□□□□ 0.08
TARDBP-230ENST00000639083 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.54■□□□□ 0.081e-7■■■■■ 34.9
TARDBP-230ENST00000639083 ADGRL2O95490 1459 aa15.54■□□□□ 0.08
TARDBP-230ENST00000639083 FOXD1Q16676 465 aa15.54■□□□□ 0.08
TARDBP-230ENST00000639083 TONSLQ96HA7 1378 aa15.54■□□□□ 0.08
TARDBP-230ENST00000639083 ZCCHC11Q5TAX3 1644 aaKnown RBP15.53■□□□□ 0.08
TARDBP-230ENST00000639083 MBD5Q9P267 1494 aa15.52■□□□□ 0.08
TARDBP-230ENST00000639083 TTC37Q6PGP7 1564 aa15.52■□□□□ 0.08
TARDBP-230ENST00000639083 C9orf84Q5VXU9 1444 aa15.52■□□□□ 0.08
TARDBP-230ENST00000639083 CDC42BPBQ9Y5S2 1711 aa15.52■□□□□ 0.07
TARDBP-230ENST00000639083 SLC4A1APQ9BWU0 796 aaKnown RBP15.51■□□□□ 0.07
TARDBP-230ENST00000639083 CROCC2H7BZ55 1655 aa15.51■□□□□ 0.07
TARDBP-230ENST00000639083 PREX2Q70Z35 1606 aa15.51■□□□□ 0.07
TARDBP-230ENST00000639083 SAMD9LQ8IVG5 1584 aa15.5■□□□□ 0.07
TARDBP-230ENST00000639083 ADGBQ8N7X0 1667 aa15.5■□□□□ 0.07
TARDBP-230ENST00000639083 ARHGAP5Q13017 1502 aa15.5■□□□□ 0.07
TARDBP-230ENST00000639083 SHANK2Q9UPX8 1470 aa15.49■□□□□ 0.07
TARDBP-230ENST00000639083 RSPH4AQ5TD94 716 aa15.49■□□□□ 0.07
TARDBP-230ENST00000639083 ANKRD50Q9ULJ7 1429 aa15.49■□□□□ 0.07
TARDBP-230ENST00000639083 MIER1Q8N108 512 aa15.47■□□□□ 0.07
TARDBP-230ENST00000639083 ARHGEF5Q12774 1597 aa15.47■□□□□ 0.07
TARDBP-230ENST00000639083 CCDC141Q6ZP82 1450 aa15.46■□□□□ 0.07
TARDBP-230ENST00000639083 ANKRD30BQ9BXX2 1392 aa15.46■□□□□ 0.06
TARDBP-230ENST00000639083 PLCH2O75038 1416 aa15.45■□□□□ 0.06
TARDBP-230ENST00000639083 KIF15Q9NS87 1388 aa15.45■□□□□ 0.06
TARDBP-230ENST00000639083 EFCAB2Q5VUJ9 269 aa15.45■□□□□ 0.06
TARDBP-230ENST00000639083 PZPP20742 1482 aa15.44■□□□□ 0.06
TARDBP-230ENST00000639083 SYCP2Q9BX26 1530 aa15.44■□□□□ 0.06
TARDBP-230ENST00000639083 MYO5CQ9NQX4 1742 aa15.43■□□□□ 0.06
TARDBP-230ENST00000639083 KIAA1107Q9UPP5 1409 aa15.42■□□□□ 0.06
TARDBP-230ENST00000639083 WDR7Q9Y4E6 1490 aa15.41■□□□□ 0.06
TARDBP-230ENST00000639083 NUP155O75694 1391 aa15.41■□□□□ 0.06
TARDBP-230ENST00000639083 PKD2Q13563 968 aa15.41■□□□□ 0.06
TARDBP-230ENST00000639083 HIRIP3Q9BW71 556 aaPredicted RBP15.41■□□□□ 0.06
TARDBP-230ENST00000639083 PLEKHH2Q8IVE3 1493 aa15.41■□□□□ 0.06
TARDBP-230ENST00000639083 ARHGEF12Q9NZN5 1544 aa15.4■□□□□ 0.06
TARDBP-230ENST00000639083 L3MBTL2Q969R5 705 aa15.4■□□□□ 0.06
TARDBP-230ENST00000639083 RPRD2Q5VT52 1461 aaKnown RBP15.38■□□□□ 0.05
TARDBP-230ENST00000639083 NPM1P06748 294 aaKnown RBP eCLIP15.37■□□□□ 0.05
TARDBP-230ENST00000639083 ASXL2Q76L83 1435 aa15.37■□□□□ 0.05
TARDBP-230ENST00000639083 TRAPPC8Q9Y2L5 1435 aa15.34■□□□□ 0.05
TARDBP-230ENST00000639083 MAST1Q9Y2H9 1570 aa15.34■□□□□ 0.05
TARDBP-230ENST00000639083 AFAP1Q8N556 730 aa15.33■□□□□ 0.05
TARDBP-230ENST00000639083 ABCC1P33527 1531 aa15.33■□□□□ 0.04
TARDBP-230ENST00000639083 ARAP3Q8WWN8 1544 aa15.32■□□□□ 0.04
TARDBP-230ENST00000639083 DDX10Q13206 875 aaKnown RBP15.31■□□□□ 0.04
TARDBP-230ENST00000639083 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.31■□□□□ 0.042e-9■■□□□ 13.4
TARDBP-230ENST00000639083 KDM5DQ9BY66 1539 aa15.31■□□□□ 0.04
TARDBP-230ENST00000639083 FANCAO15360 1455 aa15.3■□□□□ 0.04
TARDBP-230ENST00000639083 TEX14Q8IWB6 1497 aa15.3■□□□□ 0.04
TARDBP-230ENST00000639083 NBPF8Q3BBV2 869 aa15.29■□□□□ 0.04
TARDBP-230ENST00000639083 SPAG9O60271 1321 aaKnown RBP15.29■□□□□ 0.04
TARDBP-230ENST00000639083 ABCA9Q8IUA7 1624 aa15.29■□□□□ 0.04
TARDBP-230ENST00000639083 PLXNC1O60486 1568 aa15.28■□□□□ 0.04
TARDBP-230ENST00000639083 YTHDC1Q96MU7 727 aaKnown RBP15.27■□□□□ 0.04
TARDBP-230ENST00000639083 DUOX2Q9NRD8 1548 aa15.27■□□□□ 0.03
TARDBP-230ENST00000639083 FAM135AQ9P2D6 1515 aa15.27■□□□□ 0.03
TARDBP-230ENST00000639083 HSPA5P11021 654 aaKnown RBP15.26■□□□□ 0.03
TARDBP-230ENST00000639083 SCAPERQ9BY12 1400 aa15.25■□□□□ 0.03
TARDBP-230ENST00000639083 RTEL1-TNFRSF6BF6WH68 1400 aa15.24■□□□□ 0.03
TARDBP-230ENST00000639083 EIF4G2P78344 907 aaKnown RBP eCLIP15.24■□□□□ 0.031e-10■□□□□ 11
TARDBP-230ENST00000639083 ERBINQ96RT1 1412 aa15.24■□□□□ 0.03
TARDBP-230ENST00000639083 CYB5RLQ6IPT4 315 aa15.24■□□□□ 0.03
TARDBP-230ENST00000639083 ADGRL1O94910 1474 aa15.24■□□□□ 0.03
TARDBP-230ENST00000639083 MYT1LQ9UL68 1186 aa15.23■□□□□ 0.03
TARDBP-230ENST00000639083 CENPBP07199 599 aaPredicted RBP15.22■□□□□ 0.03
TARDBP-230ENST00000639083 UNC13BO14795 1591 aa15.22■□□□□ 0.03
TARDBP-230ENST00000639083 CD109Q6YHK3 1445 aa15.21■□□□□ 0.03
TARDBP-230ENST00000639083 ZFYVE16Q7Z3T8 1539 aa15.2■□□□□ 0.02
TARDBP-230ENST00000639083 ZNF326Q5BKZ1 582 aaKnown RBP15.2■□□□□ 0.02
TARDBP-230ENST00000639083 MAGI2Q86UL8 1455 aa15.17■□□□□ 0.02
TARDBP-230ENST00000639083 KDM2AQ9Y2K7 1162 aa15.17■□□□□ 0.02
TARDBP-230ENST00000639083 PLA2R1Q13018 1463 aa15.17■□□□□ 0.02
TARDBP-230ENST00000639083 ATP7AQ04656 1500 aa15.17■□□□□ 0.02
TARDBP-230ENST00000639083 IQGAP3Q86VI3 1631 aa15.17■□□□□ 0.02
TARDBP-230ENST00000639083 DCAF11Q8TEB1 546 aa15.16■□□□□ 0.02
TARDBP-230ENST00000639083 WASHC2AQ641Q2 1341 aa15.16■□□□□ 0.02
TARDBP-230ENST00000639083 CCDC144AA2RUR9 1427 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms