RNA–Protein interactions for RNA: ENST00000638921.1

GFAP-230, Transcript of glial fibrillary acidic protein, humanhuman

Gene GFAP, Length 2,617 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-230ENST00000638921 DISP1Q96F81 1524 aa19.99■□□□□ 0.79
GFAP-230ENST00000638921 ERICH6Q7L0X2 663 aa19.99■□□□□ 0.79
GFAP-230ENST00000638921 ZNF608Q9ULD9 1512 aaPredicted RBP19.98■□□□□ 0.79
GFAP-230ENST00000638921 ABCC5O15440 1437 aa19.98■□□□□ 0.79
GFAP-230ENST00000638921 KIAA0556O60303 1618 aa19.98■□□□□ 0.79
GFAP-230ENST00000638921 ANKRD30BQ9BXX2 1392 aa19.97■□□□□ 0.79
GFAP-230ENST00000638921 FOXD1Q16676 465 aa19.97■□□□□ 0.79
GFAP-230ENST00000638921 NUP153P49790 1475 aaKnown RBP19.96■□□□□ 0.79
GFAP-230ENST00000638921 DNMT1P26358 1616 aaKnown RBP19.96■□□□□ 0.79
GFAP-230ENST00000638921 CDK11AQ9UQ88 783 aaPredicted RBP19.96■□□□□ 0.79
GFAP-230ENST00000638921 HNRNPUQ00839 825 aaKnown RBP eCLIP19.95■□□□□ 0.78
GFAP-230ENST00000638921 RPRD2Q5VT52 1461 aaKnown RBP19.95■□□□□ 0.78
GFAP-230ENST00000638921 CNTLNQ9NXG0 1405 aa19.94■□□□□ 0.78
GFAP-230ENST00000638921 ZNF644Q9H582 1327 aaPredicted RBP19.93■□□□□ 0.78
GFAP-230ENST00000638921 NCOA1Q15788 1441 aa19.92■□□□□ 0.78
GFAP-230ENST00000638921 RAPGEF6Q8TEU7 1601 aa19.92■□□□□ 0.78
GFAP-230ENST00000638921 CCDC7Q96M83 1385 aa19.9■□□□□ 0.78
GFAP-230ENST00000638921 GRIN2AQ12879 1464 aa19.9■□□□□ 0.78
GFAP-230ENST00000638921 SLC4A1APQ9BWU0 796 aaKnown RBP19.9■□□□□ 0.78
GFAP-230ENST00000638921 TEX14Q8IWB6 1497 aa19.9■□□□□ 0.78
GFAP-230ENST00000638921 C11orf95C9JLR9 678 aaPredicted RBP19.89■□□□□ 0.77
GFAP-230ENST00000638921 NBPF8Q3BBV2 869 aa19.89■□□□□ 0.77
GFAP-230ENST00000638921 MSH5O43196 834 aa19.89■□□□□ 0.77
GFAP-230ENST00000638921 TROQ12816 1431 aaPredicted RBP19.86■□□□□ 0.77
GFAP-230ENST00000638921 PRKRIP1Q9H875 184 aaPredicted RBP19.86■□□□□ 0.77
GFAP-230ENST00000638921 SPATA31E1Q6ZUB1 1445 aa19.84■□□□□ 0.77
GFAP-230ENST00000638921 PRG4Q92954 1404 aaPredicted RBP19.84■□□□□ 0.77
GFAP-230ENST00000638921 CFDP1Q9UEE9 299 aaPredicted RBP19.84■□□□□ 0.77
GFAP-230ENST00000638921 FBLN2P98095 1184 aa19.82■□□□□ 0.76
GFAP-230ENST00000638921 MYT1LQ9UL68 1186 aa19.82■□□□□ 0.76
GFAP-230ENST00000638921 CAMSAP2Q08AD1 1489 aa19.82■□□□□ 0.76
GFAP-230ENST00000638921 EIF4G3O43432 1585 aaKnown RBP19.82■□□□□ 0.76
GFAP-230ENST00000638921 CCDC184Q52MB2 194 aa19.82■□□□□ 0.76
GFAP-230ENST00000638921 PZPP20742 1482 aa19.81■□□□□ 0.76
GFAP-230ENST00000638921 FANCIQ9NVI1 1328 aa19.8■□□□□ 0.76
GFAP-230ENST00000638921 GPATCH8Q9UKJ3 1502 aaKnown RBP19.8■□□□□ 0.76
GFAP-230ENST00000638921 KIF7Q2M1P5 1343 aa19.79■□□□□ 0.76
GFAP-230ENST00000638921 MAGI1Q96QZ7 1491 aaPredicted RBP19.79■□□□□ 0.76
GFAP-230ENST00000638921 ITSN2Q9NZM3 1697 aa19.78■□□□□ 0.76
GFAP-230ENST00000638921 PLB1Q6P1J6 1458 aa19.78■□□□□ 0.76
GFAP-230ENST00000638921 ADGRL2O95490 1459 aa19.77■□□□□ 0.76
GFAP-230ENST00000638921 CHMP7Q8WUX9 453 aaPredicted RBP19.77■□□□□ 0.76
GFAP-230ENST00000638921 ERICH6BQ5W0A0 696 aa19.76■□□□□ 0.75
GFAP-230ENST00000638921 MRS2Q9HD23 443 aa19.76■□□□□ 0.75
GFAP-230ENST00000638921 ERCC6Q03468 1493 aa19.75■□□□□ 0.75
GFAP-230ENST00000638921 KIAA1107Q9UPP5 1409 aa19.75■□□□□ 0.75
GFAP-230ENST00000638921 ADGBQ8N7X0 1667 aa19.75■□□□□ 0.75
GFAP-230ENST00000638921 SYNJ2O15056 1496 aa19.75■□□□□ 0.75
GFAP-230ENST00000638921 ADCY10Q96PN6 1610 aa19.74■□□□□ 0.75
GFAP-230ENST00000638921 FAM9BQ8IZU0 186 aa19.74■□□□□ 0.75
GFAP-230ENST00000638921 CEP170Q5SW79 1584 aa19.74■□□□□ 0.75
GFAP-230ENST00000638921 POLR1AO95602 1720 aaPredicted RBP19.73■□□□□ 0.75
GFAP-230ENST00000638921 ZNF777Q9ULD5 760 aaPredicted RBP19.73■□□□□ 0.75
GFAP-230ENST00000638921 ANKRD30AQ9BXX3 1397 aa19.73■□□□□ 0.75
GFAP-230ENST00000638921 CARMIL2Q6F5E8 1435 aa19.73■□□□□ 0.75
GFAP-230ENST00000638921 MBD5Q9P267 1494 aa19.73■□□□□ 0.75
GFAP-230ENST00000638921 KIF14Q15058 1648 aa19.72■□□□□ 0.75
GFAP-230ENST00000638921 IRX6P78412 446 aaPredicted RBP19.72■□□□□ 0.75
GFAP-230ENST00000638921 ZBED9Q6R2W3 1325 aa19.72■□□□□ 0.75
GFAP-230ENST00000638921 PKD2Q13563 968 aa19.7■□□□□ 0.74
GFAP-230ENST00000638921 CROCC2H7BZ55 1655 aa19.7■□□□□ 0.74
GFAP-230ENST00000638921 JPH4Q96JJ6 628 aa19.7■□□□□ 0.74
GFAP-230ENST00000638921 ANKRD50Q9ULJ7 1429 aa19.68■□□□□ 0.74
GFAP-230ENST00000638921 NUP160Q12769 1436 aa19.67■□□□□ 0.74
GFAP-230ENST00000638921 USP47Q96K76 1375 aa19.67■□□□□ 0.74
GFAP-230ENST00000638921 PLEKHD1A6NEE1 506 aa19.66■□□□□ 0.74
GFAP-230ENST00000638921 PPP4R2Q9NY27 417 aa19.66■□□□□ 0.74
GFAP-230ENST00000638921 ARID4BQ4LE39 1312 aaPredicted RBP19.65■□□□□ 0.74
GFAP-230ENST00000638921 DHX29Q7Z478 1369 aaKnown RBP19.64■□□□□ 0.73
GFAP-230ENST00000638921 DEKP35659 375 aaKnown RBP19.63■□□□□ 0.73
GFAP-230ENST00000638921 SHANK2Q9UPX8 1470 aa19.63■□□□□ 0.73
GFAP-230ENST00000638921 ZNF326Q5BKZ1 582 aaKnown RBP19.63■□□□□ 0.73
GFAP-230ENST00000638921 UHRF1BP1Q6BDS2 1440 aa19.62■□□□□ 0.73
GFAP-230ENST00000638921 ABCC10Q5T3U5 1492 aa19.62■□□□□ 0.73
GFAP-230ENST00000638921 NUP155O75694 1391 aa19.61■□□□□ 0.73
GFAP-230ENST00000638921 C9orf84Q5VXU9 1444 aa19.61■□□□□ 0.73
GFAP-230ENST00000638921 ABCA8O94911 1581 aa19.6■□□□□ 0.73
GFAP-230ENST00000638921 ATP10BO94823 1461 aa19.59■□□□□ 0.73
GFAP-230ENST00000638921 BCORL1Q5H9F3 1711 aa19.59■□□□□ 0.73
GFAP-230ENST00000638921 KDM5CP41229 1560 aa19.59■□□□□ 0.73
GFAP-230ENST00000638921 CDC42BPAQ5VT25 1732 aa19.59■□□□□ 0.73
GFAP-230ENST00000638921 TSPY4P0CV99 314 aa19.58■□□□□ 0.72
GFAP-230ENST00000638921 TSPY10P0CW01 314 aa19.58■□□□□ 0.72
GFAP-230ENST00000638921 RALGAPBQ86X10 1494 aa19.57■□□□□ 0.72
GFAP-230ENST00000638921 KDM5DQ9BY66 1539 aa19.56■□□□□ 0.72
GFAP-230ENST00000638921 ARHGEF12Q9NZN5 1544 aa19.56■□□□□ 0.72
GFAP-230ENST00000638921 ROCK2O75116 1388 aaKnown RBP19.56■□□□□ 0.72
GFAP-230ENST00000638921 POLR3GLQ9BT43 218 aa19.56■□□□□ 0.72
GFAP-230ENST00000638921 ANO8Q9HCE9 1232 aaPredicted RBP19.55■□□□□ 0.72
GFAP-230ENST00000638921 CARD11Q9BXL7 1154 aa19.54■□□□□ 0.72
GFAP-230ENST00000638921 SMG6Q86US8 1419 aaKnown RBP19.53■□□□□ 0.72
GFAP-230ENST00000638921 PTPRGP23470 1445 aa19.52■□□□□ 0.72
GFAP-230ENST00000638921 KIF15Q9NS87 1388 aa19.52■□□□□ 0.72
GFAP-230ENST00000638921 ARHGEF5Q12774 1597 aa19.5■□□□□ 0.71
GFAP-230ENST00000638921 HNRNPMP52272 730 aaKnown RBP eCLIP19.5■□□□□ 0.71
GFAP-230ENST00000638921 CNGB1Q14028 1251 aaPredicted RBP19.49■□□□□ 0.71
GFAP-230ENST00000638921 B4GALNT3Q6L9W6 998 aa19.49■□□□□ 0.71
GFAP-230ENST00000638921 NUDCQ9Y266 331 aa19.48■□□□□ 0.71
GFAP-230ENST00000638921 PNISRQ8TF01 805 aaKnown RBP19.47■□□□□ 0.71
GFAP-230ENST00000638921 KDM2AQ9Y2K7 1162 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms