RNA–Protein interactions for RNA: ENST00000638298.1

RTTN-212, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 892 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-212ENST00000638298 FAM205CA6NFA0 338 aa15.32■□□□□ 0.04
RTTN-212ENST00000638298 EIF4G1Q04637 1599 aaKnown RBP15.32■□□□□ 0.04
RTTN-212ENST00000638298 POTEB3A0JP26 581 aa15.31■□□□□ 0.04
RTTN-212ENST00000638298 HOXB1P14653 301 aaPredicted RBP15.31■□□□□ 0.04
RTTN-212ENST00000638298 MMRN1Q13201 1228 aa15.31■□□□□ 0.04
RTTN-212ENST00000638298 POTEBQ6S5H4 581 aa15.31■□□□□ 0.04
RTTN-212ENST00000638298 ZNF710Q8N1W2 664 aa15.3■□□□□ 0.04
RTTN-212ENST00000638298 PHF8Q9UPP1 1060 aa15.29■□□□□ 0.04
RTTN-212ENST00000638298 SCRIBQ14160 1630 aa15.26■□□□□ 0.03
RTTN-212ENST00000638298 TMEM92Q6UXU6 159 aa15.26■□□□□ 0.03
RTTN-212ENST00000638298 KRTAP3-3Q9BYR6 98 aa15.26■□□□□ 0.03
RTTN-212ENST00000638298 KRTAP3-2Q9BYR7 98 aa15.26■□□□□ 0.03
RTTN-212ENST00000638298 SHROOM4Q9ULL8 1493 aa15.26■□□□□ 0.03
RTTN-212ENST00000638298 RIMBP2O15034 1052 aa15.25■□□□□ 0.03
RTTN-212ENST00000638298 NLRP6P59044 892 aa15.23■□□□□ 0.03
RTTN-212ENST00000638298 BCL11BQ9C0K0 894 aaPredicted RBP15.22■□□□□ 0.03
RTTN-212ENST00000638298 ZSWIM6Q9HCJ5 1215 aa15.22■□□□□ 0.03
RTTN-212ENST00000638298 FBXO22Q8NEZ5 403 aa15.2■□□□□ 0.02
RTTN-212ENST00000638298 STK24Q9Y6E0 443 aa15.17■□□□□ 0.02
RTTN-212ENST00000638298 ECM2O94769 699 aaPredicted RBP15.16■□□□□ 0.02
RTTN-212ENST00000638298 ERBB3P21860 1342 aa15.16■□□□□ 0.02
RTTN-212ENST00000638298 MFRPQ9BY79 579 aa15.13■□□□□ 0.01
RTTN-212ENST00000638298 STK25O00506 426 aa15.11■□□□□ 0.01
RTTN-212ENST00000638298 ZCCHC6Q5VYS8 1495 aaKnown RBP15.11■□□□□ 0.01
RTTN-212ENST00000638298 GPR153Q6NV75 609 aa15.1■□□□□ 0.01
RTTN-212ENST00000638298 PKD2Q13563 968 aa15.09■□□□□ 0.01
RTTN-212ENST00000638298 VARS2Q5ST30 1063 aaKnown RBP15.06■□□□□ 0
RTTN-212ENST00000638298 DCAF1Q9Y4B6 1507 aa15.03■□□□□ -0
RTTN-212ENST00000638298 RGL2O15211 777 aa15.03■□□□□ -0
RTTN-212ENST00000638298 KIF3CO14782 793 aa15.01□□□□□ -0.01
RTTN-212ENST00000638298 ZNF687Q8N1G0 1237 aa15.01□□□□□ -0.01
RTTN-212ENST00000638298 ARSIQ5FYB1 569 aa14.97□□□□□ -0.01
RTTN-212ENST00000638298 C2orf72A6NCS6 295 aa14.94□□□□□ -0.02
RTTN-212ENST00000638298 ERCC6Q03468 1493 aa14.94□□□□□ -0.02
RTTN-212ENST00000638298 CUX2O14529 1486 aa14.93□□□□□ -0.02
RTTN-212ENST00000638298 ZNF316A6NFI3 1004 aaPredicted RBP14.9□□□□□ -0.02
RTTN-212ENST00000638298 SLC34A2O95436 690 aa14.88□□□□□ -0.03
RTTN-212ENST00000638298 KHSRPQ92945 711 aaKnown RBP eCLIP14.86□□□□□ -0.03
RTTN-212ENST00000638298 TMC2Q8TDI7 906 aa14.85□□□□□ -0.03
RTTN-212ENST00000638298 PTGER2P43116 358 aa14.84□□□□□ -0.03
RTTN-212ENST00000638298 RNF166Q96A37 237 aaPredicted RBP14.84□□□□□ -0.03
RTTN-212ENST00000638298 PPP1R37O75864 691 aa14.81□□□□□ -0.04
RTTN-212ENST00000638298 MYT1LQ9UL68 1186 aa14.81□□□□□ -0.04
RTTN-212ENST00000638298 HS6ST3Q8IZP7 471 aa14.8□□□□□ -0.04
RTTN-212ENST00000638298 PCDHGA4Q9Y5G9 962 aa14.8□□□□□ -0.04
RTTN-212ENST00000638298 NUDT7P0C024 238 aa14.78□□□□□ -0.04
RTTN-212ENST00000638298 PBX2P40425 430 aa14.75□□□□□ -0.05
RTTN-212ENST00000638298 LSM11P83369 360 aaKnown RBP eCLIP14.74□□□□□ -0.05
RTTN-212ENST00000638298 LHX6Q9UPM6 363 aa14.73□□□□□ -0.05
RTTN-212ENST00000638298 ANKRD13DQ6ZTN6 518 aa14.71□□□□□ -0.05
RTTN-212ENST00000638298 FOXK1P85037 733 aa14.68□□□□□ -0.06
RTTN-212ENST00000638298 PTCD2Q8WV60 388 aaKnown RBP14.68□□□□□ -0.06
RTTN-212ENST00000638298 NESP48681 1621 aa14.67□□□□□ -0.06
RTTN-212ENST00000638298 KDM4FA0A1W2PPD8 638 aa14.66□□□□□ -0.06
RTTN-212ENST00000638298 PSDA5PKW4 1024 aaPredicted RBP14.66□□□□□ -0.06
RTTN-212ENST00000638298 GPHNQ9NQX3 736 aaPredicted RBP14.66□□□□□ -0.06
RTTN-212ENST00000638298 POTEEQ6S8J3 1075 aa14.65□□□□□ -0.06
RTTN-212ENST00000638298 NCAPD3P42695 1498 aa14.64□□□□□ -0.07
RTTN-212ENST00000638298 CHGAP10645 457 aaKnown RBP14.61□□□□□ -0.07
RTTN-212ENST00000638298 PLPP6Q8IY26 295 aa14.61□□□□□ -0.07
RTTN-212ENST00000638298 RYDENQ9NUL5 291 aaKnown RBP14.59□□□□□ -0.07
RTTN-212ENST00000638298 ATAD2BQ9ULI0 1458 aa14.57□□□□□ -0.08
RTTN-212ENST00000638298 AXIN2Q9Y2T1 843 aa14.57□□□□□ -0.08
RTTN-212ENST00000638298 ARHGAP33O14559 1287 aa14.56□□□□□ -0.08
RTTN-212ENST00000638298 DSG2Q14126 1118 aa14.56□□□□□ -0.08
RTTN-212ENST00000638298 TBC1D12O60347 775 aa14.54□□□□□ -0.08
RTTN-212ENST00000638298 NKX1-1Q15270 411 aaPredicted RBP14.54□□□□□ -0.08
RTTN-212ENST00000638298 SMARCA2P51531 1590 aa14.53□□□□□ -0.08
RTTN-212ENST00000638298 THOC2Q8NI27 1593 aaKnown RBP14.51□□□□□ -0.09
RTTN-212ENST00000638298 ADGRD1Q6QNK2 874 aa14.5□□□□□ -0.09
RTTN-212ENST00000638298 TK2O00142 265 aa14.49□□□□□ -0.09
RTTN-212ENST00000638298 PPP4R3BQ5MIZ7 849 aa14.48□□□□□ -0.09
RTTN-212ENST00000638298 CRISPLD2Q9H0B8 497 aa14.47□□□□□ -0.09
RTTN-212ENST00000638298 HMGXB3Q12766 1538 aa14.46□□□□□ -0.09
RTTN-212ENST00000638298 BAZ1BQ9UIG0 1483 aaKnown RBP14.45□□□□□ -0.1
RTTN-212ENST00000638298 OXER1Q8TDS5 423 aa14.45□□□□□ -0.1
RTTN-212ENST00000638298 SMARCA4P51532 1647 aa14.43□□□□□ -0.1
RTTN-212ENST00000638298 HRO43593 1189 aa14.41□□□□□ -0.1
RTTN-212ENST00000638298 KIF21AQ7Z4S6 1674 aa14.4□□□□□ -0.1
RTTN-212ENST00000638298 PSEN2P49810 448 aa14.4□□□□□ -0.1
RTTN-212ENST00000638298 DMRTA1Q5VZB9 504 aa14.4□□□□□ -0.1
RTTN-212ENST00000638298 HCSTQ9UBK5 93 aa14.4□□□□□ -0.1
RTTN-212ENST00000638298 PPP1R15BQ5SWA1 713 aa14.39□□□□□ -0.11
RTTN-212ENST00000638298 LAMC3Q9Y6N6 1575 aa14.39□□□□□ -0.11
RTTN-212ENST00000638298 PDS5BQ9NTI5 1447 aa14.38□□□□□ -0.11
RTTN-212ENST00000638298 NCKAP5LQ9HCH0 1330 aa14.36□□□□□ -0.11
RTTN-212ENST00000638298 PDE4AP27815 886 aa14.35□□□□□ -0.11
RTTN-212ENST00000638298 KCNH8Q96L42 1107 aa14.35□□□□□ -0.11
RTTN-212ENST00000638298 GTPBP6O43824 516 aaPredicted RBP14.33□□□□□ -0.12
RTTN-212ENST00000638298 UPF1Q92900 1129 aaKnown RBP eCLIP14.33□□□□□ -0.12
RTTN-212ENST00000638298 KCNK17Q96T54 332 aa14.32□□□□□ -0.12
RTTN-212ENST00000638298 BCL2L12Q9HB09 334 aa14.3□□□□□ -0.12
RTTN-212ENST00000638298 ZNF454Q8N9F8 522 aa14.29□□□□□ -0.12
RTTN-212ENST00000638298 BAZ1AQ9NRL2 1556 aaPredicted RBP14.29□□□□□ -0.12
RTTN-212ENST00000638298 ANO8Q9HCE9 1232 aaPredicted RBP14.28□□□□□ -0.12
RTTN-212ENST00000638298 PLA2G2EQ9NZK7 142 aa14.28□□□□□ -0.12
RTTN-212ENST00000638298 MRC2Q9UBG0 1479 aa14.28□□□□□ -0.12
RTTN-212ENST00000638298 FOSBP53539 338 aa14.27□□□□□ -0.13
RTTN-212ENST00000638298 SLC4A5Q9BY07 1137 aa14.27□□□□□ -0.13
RTTN-212ENST00000638298 VPS9D1Q9Y2B5 631 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms