RNA–Protein interactions for RNA: ENST00000638154.2

TCF4-290, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 7,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-290ENST00000638154 BRPF3Q9ULD4 1205 aa6.92□□□□□ -1.3
TCF4-290ENST00000638154 SOX12O15370 315 aa6.92□□□□□ -1.3
TCF4-290ENST00000638154 HSP90AB3PQ58FF7 597 aa6.92□□□□□ -1.3
TCF4-290ENST00000638154 FAM43AQ8N2R8 423 aa6.92□□□□□ -1.3
TCF4-290ENST00000638154 GOLIM4O00461 696 aa6.91□□□□□ -1.3
TCF4-290ENST00000638154 PLCB2Q00722 1185 aa6.91□□□□□ -1.3
TCF4-290ENST00000638154 DEF6Q9H4E7 631 aa6.91□□□□□ -1.3
TCF4-290ENST00000638154 GZF1Q9H116 711 aaPredicted RBP6.91□□□□□ -1.3
TCF4-290ENST00000638154 ISY1Q9ULR0 285 aaKnown RBP6.91□□□□□ -1.3
TCF4-290ENST00000638154 CGNQ9P2M7 1197 aaKnown RBP6.91□□□□□ -1.3
TCF4-290ENST00000638154 TRIM52Q96A61 297 aa6.9□□□□□ -1.3
TCF4-290ENST00000638154 RDXP35241 583 aaKnown RBP6.9□□□□□ -1.31
TCF4-290ENST00000638154 KIAA2012Q0VF49 1180 aa6.9□□□□□ -1.31
TCF4-290ENST00000638154 DNAJC2Q99543 621 aaKnown RBP6.9□□□□□ -1.31
TCF4-290ENST00000638154 TDO2P48775 406 aa6.89□□□□□ -1.31
TCF4-290ENST00000638154 TMCO5BA8MYB1 307 aa6.89□□□□□ -1.31
TCF4-290ENST00000638154 GTF2A1P52655 376 aaPredicted RBP6.89□□□□□ -1.31
TCF4-290ENST00000638154 ZNF622Q969S3 477 aaKnown RBP eCLIP6.89□□□□□ -1.315e-7■□□□□ 11.2
TCF4-290ENST00000638154 HNRNPUQ00839 825 aaKnown RBP eCLIP6.89□□□□□ -1.31
TCF4-290ENST00000638154 TMEM132AQ24JP5 1023 aa6.89□□□□□ -1.31
TCF4-290ENST00000638154 TEX35Q5T0J7 233 aa6.89□□□□□ -1.31
TCF4-290ENST00000638154 SAMD1Q6SPF0 538 aaPredicted RBP6.89□□□□□ -1.31
TCF4-290ENST00000638154 TICAM2Q86XR7 235 aa6.89□□□□□ -1.31
TCF4-290ENST00000638154 PIK3R5Q8WYR1 880 aa6.89□□□□□ -1.31
TCF4-290ENST00000638154 SLC4A1APQ9BWU0 796 aaKnown RBP6.88□□□□□ -1.31
TCF4-290ENST00000638154 TSPYL1Q9H0U9 437 aa6.88□□□□□ -1.31
TCF4-290ENST00000638154 IPO9Q96P70 1041 aaKnown RBP6.87□□□□□ -1.31
TCF4-290ENST00000638154 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.87□□□□□ -1.31
TCF4-290ENST00000638154 MYH16Q9H6N6 1097 aa6.87□□□□□ -1.31
TCF4-290ENST00000638154 BANK1Q8NDB2 785 aa6.87□□□□□ -1.31
TCF4-290ENST00000638154 CWC15Q9P013 229 aaKnown RBP6.87□□□□□ -1.31
TCF4-290ENST00000638154 DYDC1Q8WWB3 177 aa6.87□□□□□ -1.31
TCF4-290ENST00000638154 PDCL3Q9H2J4 239 aa6.86□□□□□ -1.31
TCF4-290ENST00000638154 HNRNPUL2Q1KMD3 747 aaKnown RBP6.86□□□□□ -1.31
TCF4-290ENST00000638154 HIRIP3Q9BW71 556 aaPredicted RBP6.86□□□□□ -1.31
TCF4-290ENST00000638154 ERICH4A6NGS2 130 aa6.85□□□□□ -1.31
TCF4-290ENST00000638154 SECISBP2LQ93073 1101 aaKnown RBP6.85□□□□□ -1.31
TCF4-290ENST00000638154 ANAPC15P60006 121 aa6.85□□□□□ -1.31
TCF4-290ENST00000638154 SUDS3Q9H7L9 328 aaPredicted RBP6.85□□□□□ -1.31
TCF4-290ENST00000638154 TEX2Q8IWB9 1127 aa6.85□□□□□ -1.31
TCF4-290ENST00000638154 RBM28Q9NW13 759 aaKnown RBP6.85□□□□□ -1.31
TCF4-290ENST00000638154 PAF1Q8N7H5 531 aa6.85□□□□□ -1.31
TCF4-290ENST00000638154 PES1O00541 588 aaKnown RBP6.84□□□□□ -1.31
TCF4-290ENST00000638154 GPS2Q13227 327 aa6.84□□□□□ -1.31
TCF4-290ENST00000638154 CNKSR2Q8WXI2 1034 aa6.84□□□□□ -1.31
TCF4-290ENST00000638154 H0YHG0 523 aa6.84□□□□□ -1.31
TCF4-290ENST00000638154 SARNPP82979 210 aaKnown RBP6.84□□□□□ -1.31
TCF4-290ENST00000638154 NOL8Q76FK4 1167 aaKnown RBP6.84□□□□□ -1.31
TCF4-290ENST00000638154 GIMAP7Q8NHV1 300 aa6.84□□□□□ -1.31
TCF4-290ENST00000638154 FANCIQ9NVI1 1328 aa6.84□□□□□ -1.31
TCF4-290ENST00000638154 RAD21O60216 631 aa6.84□□□□□ -1.31
TCF4-290ENST00000638154 CWC22Q9HCG8 908 aaKnown RBP6.84□□□□□ -1.31
TCF4-290ENST00000638154 KCNJ4P48050 445 aa6.84□□□□□ -1.32
TCF4-290ENST00000638154 CCDC34Q96HJ3 373 aa6.83□□□□□ -1.32
TCF4-290ENST00000638154 HMGN5P82970 282 aaKnown RBP6.83□□□□□ -1.32
TCF4-290ENST00000638154 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.83□□□□□ -1.32
TCF4-290ENST00000638154 R3HCC1Q9Y3T6 440 aaKnown RBP6.83□□□□□ -1.32
TCF4-290ENST00000638154 SETSIPP0DME0 302 aa6.83□□□□□ -1.32
TCF4-290ENST00000638154 CASC1Q6TDU7 716 aa6.82□□□□□ -1.32
TCF4-290ENST00000638154 NOC3LQ8WTT2 800 aaKnown RBP6.82□□□□□ -1.32
TCF4-290ENST00000638154 PPP4R2Q9NY27 417 aa6.82□□□□□ -1.32
TCF4-290ENST00000638154 DRC7Q8IY82 874 aa6.82□□□□□ -1.32
TCF4-290ENST00000638154 DZIP1Q86YF9 867 aaKnown RBP6.82□□□□□ -1.32
TCF4-290ENST00000638154 LOC105371045A0A1W2PR82 267 aa6.81□□□□□ -1.32
TCF4-290ENST00000638154 CCDC97Q96F63 343 aaPredicted RBP6.81□□□□□ -1.32
TCF4-290ENST00000638154 MCCP23508 829 aa6.81□□□□□ -1.32
TCF4-290ENST00000638154 ARMCX6Q7L4S7 300 aa6.81□□□□□ -1.32
TCF4-290ENST00000638154 HTATSF1O43719 755 aaKnown RBP6.8□□□□□ -1.32
TCF4-290ENST00000638154 WDR78Q5VTH9 848 aa6.8□□□□□ -1.32
TCF4-290ENST00000638154 CHIC1Q5VXU3 224 aa6.79□□□□□ -1.32
TCF4-290ENST00000638154 CSPP1Q1MSJ5 1256 aa6.79□□□□□ -1.32
TCF4-290ENST00000638154 HMGB1P1B2RPK0 211 aaPredicted RBP6.79□□□□□ -1.32
TCF4-290ENST00000638154 CERS3Q8IU89 383 aa6.79□□□□□ -1.32
TCF4-290ENST00000638154 TRERF1Q96PN7 1200 aa6.79□□□□□ -1.32
TCF4-290ENST00000638154 B4GALNT3Q6L9W6 998 aa6.79□□□□□ -1.32
TCF4-290ENST00000638154 CALD1Q05682 793 aaKnown RBP6.79□□□□□ -1.32
TCF4-290ENST00000638154 GOLGA6L4A6NEF3 574 aa6.78□□□□□ -1.32
TCF4-290ENST00000638154 TCERG1O14776 1098 aaKnown RBP6.78□□□□□ -1.32
TCF4-290ENST00000638154 CCP110O43303 1012 aa6.78□□□□□ -1.32
TCF4-290ENST00000638154 NRDCO43847 1150 aa6.78□□□□□ -1.32
TCF4-290ENST00000638154 CPSF2Q9P2I0 782 aaKnown RBP6.78□□□□□ -1.32
TCF4-290ENST00000638154 CREBRFQ8IUR6 639 aa6.78□□□□□ -1.32
TCF4-290ENST00000638154 CHMP3Q9Y3E7 222 aa6.78□□□□□ -1.32
TCF4-290ENST00000638154 KIF3AQ9Y496 699 aa6.77□□□□□ -1.33
TCF4-290ENST00000638154 CT47A1Q5JQC4 288 aaPredicted RBP6.77□□□□□ -1.33
TCF4-290ENST00000638154 CBX1P83916 185 aa6.77□□□□□ -1.33
TCF4-290ENST00000638154 CALCOCO1Q9P1Z2 691 aa6.77□□□□□ -1.33
TCF4-290ENST00000638154 LIG1P18858 919 aa6.77□□□□□ -1.33
TCF4-290ENST00000638154 SPRYD3Q8NCJ5 442 aa6.77□□□□□ -1.33
TCF4-290ENST00000638154 FRAT1Q92837 279 aaPredicted RBP6.76□□□□□ -1.33
TCF4-290ENST00000638154 USP8P40818 1118 aa6.76□□□□□ -1.33
TCF4-290ENST00000638154 TIGD1Q96MW7 591 aa6.76□□□□□ -1.33
TCF4-290ENST00000638154 MNS1Q8NEH6 495 aa6.76□□□□□ -1.33
TCF4-290ENST00000638154 TRIM6-TRIM34B2RNG4 842 aa6.76□□□□□ -1.33
TCF4-290ENST00000638154 TRIM34Q9BYJ4 488 aa6.76□□□□□ -1.33
TCF4-290ENST00000638154 TOMM22Q9NS69 142 aa6.76□□□□□ -1.33
TCF4-290ENST00000638154 GOLGA6L19H0YKK7 550 aa6.76□□□□□ -1.33
TCF4-290ENST00000638154 KDM4AO75164 1064 aa6.76□□□□□ -1.33
TCF4-290ENST00000638154 POLD1P28340 1107 aa6.76□□□□□ -1.33
TCF4-290ENST00000638154 LRCH2Q5VUJ6 765 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms