RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 RASSF8Q8NHQ8 419 aa20.8■□□□□ 0.92
CACNA1A-258ENST00000638029 FRAT2O75474 233 aaPredicted RBP20.8■□□□□ 0.92
CACNA1A-258ENST00000638029 GORABQ5T7V8 394 aa20.78■□□□□ 0.92
CACNA1A-258ENST00000638029 NOP58Q9Y2X3 529 aaKnown RBP20.78■□□□□ 0.92
CACNA1A-258ENST00000638029 GZF1Q9H116 711 aaPredicted RBP20.77■□□□□ 0.91
CACNA1A-258ENST00000638029 CWC22Q9HCG8 908 aaKnown RBP20.77■□□□□ 0.91
CACNA1A-258ENST00000638029 PLEKHD1A6NEE1 506 aa20.76■□□□□ 0.91
CACNA1A-258ENST00000638029 RTF1Q92541 710 aaKnown RBP20.76■□□□□ 0.91
CACNA1A-258ENST00000638029 STK26Q9P289 416 aa20.75■□□□□ 0.91
CACNA1A-258ENST00000638029 MARCH6O60337 910 aa20.75■□□□□ 0.91
CACNA1A-258ENST00000638029 CEP89Q96ST8 783 aa20.75■□□□□ 0.91
CACNA1A-258ENST00000638029 SUPT16HQ9Y5B9 1047 aaKnown RBP20.74■□□□□ 0.91
CACNA1A-258ENST00000638029 KAT6BQ8WYB5 2073 aa20.74■□□□□ 0.91
CACNA1A-258ENST00000638029 SRPK2P78362 688 aaKnown RBP20.73■□□□□ 0.91
CACNA1A-258ENST00000638029 RSF1Q96T23 1441 aaPredicted RBP20.73■□□□□ 0.91
CACNA1A-258ENST00000638029 NUDCQ9Y266 331 aa20.73■□□□□ 0.91
CACNA1A-258ENST00000638029 SAMD1Q6SPF0 538 aaPredicted RBP20.73■□□□□ 0.91
CACNA1A-258ENST00000638029 MIER1Q8N108 512 aa20.73■□□□□ 0.91
CACNA1A-258ENST00000638029 GTF2E1P29083 439 aaPredicted RBP20.73■□□□□ 0.91
CACNA1A-258ENST00000638029 MEX3CQ5U5Q3 659 aaKnown RBP20.72■□□□□ 0.91
CACNA1A-258ENST00000638029 PES1O00541 588 aaKnown RBP20.71■□□□□ 0.91
CACNA1A-258ENST00000638029 HSCBQ8IWL3 235 aa20.71■□□□□ 0.91
CACNA1A-258ENST00000638029 DCAF1Q9Y4B6 1507 aa20.7■□□□□ 0.9
CACNA1A-258ENST00000638029 FBXW7Q969H0 707 aa20.7■□□□□ 0.9
CACNA1A-258ENST00000638029 TCEAL9Q9UHQ7 104 aa20.7■□□□□ 0.9
CACNA1A-258ENST00000638029 DCAF8L1A6NGE4 600 aa20.68■□□□□ 0.9
CACNA1A-258ENST00000638029 GOLGA6L1Q8N7Z2 621 aa20.68■□□□□ 0.9
CACNA1A-258ENST00000638029 ZCCHC6Q5VYS8 1495 aaKnown RBP20.67■□□□□ 0.9
CACNA1A-258ENST00000638029 CARD11Q9BXL7 1154 aa20.67■□□□□ 0.9
CACNA1A-258ENST00000638029 MCCP23508 829 aa20.67■□□□□ 0.9
CACNA1A-258ENST00000638029 CALRP27797 417 aaKnown RBP20.67■□□□□ 0.9
CACNA1A-258ENST00000638029 KIAA1211Q6ZU35 1233 aa20.67■□□□□ 0.9
CACNA1A-258ENST00000638029 TOMM22Q9NS69 142 aa20.66■□□□□ 0.9
CACNA1A-258ENST00000638029 B4GALNT3Q6L9W6 998 aa20.65■□□□□ 0.9
CACNA1A-258ENST00000638029 NOL8Q76FK4 1167 aaKnown RBP20.64■□□□□ 0.89
CACNA1A-258ENST00000638029 CTDP1Q9Y5B0 961 aaPredicted RBP20.64■□□□□ 0.89
CACNA1A-258ENST00000638029 CLIP1P30622 1438 aa20.63■□□□□ 0.89
CACNA1A-258ENST00000638029 CHMP4BQ9H444 224 aaKnown RBP20.63■□□□□ 0.89
CACNA1A-258ENST00000638029 CFDP1Q9UEE9 299 aaPredicted RBP20.61■□□□□ 0.89
CACNA1A-258ENST00000638029 TRIM34Q9BYJ4 488 aa20.59■□□□□ 0.89
CACNA1A-258ENST00000638029 FOXD4L5Q5VV16 416 aaPredicted RBP20.58■□□□□ 0.88
CACNA1A-258ENST00000638029 FOXD4L4Q8WXT5 416 aaPredicted RBP20.58■□□□□ 0.88
CACNA1A-258ENST00000638029 FOXD4L1Q9NU39 408 aa20.57■□□□□ 0.88
CACNA1A-258ENST00000638029 ERCC6Q03468 1493 aa20.55■□□□□ 0.88
CACNA1A-258ENST00000638029 PPP1R1BQ9UD71 204 aaPredicted RBP20.55■□□□□ 0.88
CACNA1A-258ENST00000638029 MS4A1P11836 297 aa20.55■□□□□ 0.88
CACNA1A-258ENST00000638029 CCAR2Q8N163 923 aaKnown RBP20.55■□□□□ 0.88
CACNA1A-258ENST00000638029 LTV1Q96GA3 475 aaPredicted RBP20.54■□□□□ 0.88
CACNA1A-258ENST00000638029 PTMSP20962 102 aa20.54■□□□□ 0.88
CACNA1A-258ENST00000638029 VSIG10Q8N0Z9 540 aa20.54■□□□□ 0.88
CACNA1A-258ENST00000638029 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.54■□□□□ 0.887e-11■■■■■ 260.8
CACNA1A-258ENST00000638029 TRIM6-TRIM34B2RNG4 842 aa20.53■□□□□ 0.88
CACNA1A-258ENST00000638029 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.53■□□□□ 0.88
CACNA1A-258ENST00000638029 NUTM2FA1L443 756 aa20.53■□□□□ 0.88
CACNA1A-258ENST00000638029 EVA1CP58658 441 aa20.52■□□□□ 0.88
CACNA1A-258ENST00000638029 TPM4P67936 248 aa20.5■□□□□ 0.87
CACNA1A-258ENST00000638029 CCDC180Q9P1Z9 1646 aa20.49■□□□□ 0.87
CACNA1A-258ENST00000638029 BCL11BQ9C0K0 894 aaPredicted RBP20.48■□□□□ 0.87
CACNA1A-258ENST00000638029 SYTL4Q96C24 671 aaPredicted RBP20.48■□□□□ 0.87
CACNA1A-258ENST00000638029 SETQ01105 290 aaPredicted RBP20.47■□□□□ 0.87
CACNA1A-258ENST00000638029 TPD52L1Q16890 204 aaPredicted RBP20.47■□□□□ 0.87
CACNA1A-258ENST00000638029 NGEFQ8N5V2 710 aa20.46■□□□□ 0.87
CACNA1A-258ENST00000638029 RB1CC1Q8TDY2 1594 aa20.46■□□□□ 0.87
CACNA1A-258ENST00000638029 FOXD4L6Q3SYB3 417 aaPredicted RBP20.46■□□□□ 0.87
CACNA1A-258ENST00000638029 FOXD4L3Q6VB84 417 aaPredicted RBP20.46■□□□□ 0.87
CACNA1A-258ENST00000638029 KANK1Q14678 1352 aa20.45■□□□□ 0.86
CACNA1A-258ENST00000638029 GOLGA3Q08378 1498 aa20.45■□□□□ 0.86
CACNA1A-258ENST00000638029 HDGFP51858 240 aaKnown RBP20.45■□□□□ 0.86
CACNA1A-258ENST00000638029 SLC4A10Q6U841 1118 aa20.44■□□□□ 0.86
CACNA1A-258ENST00000638029 SLKQ9H2G2 1235 aaPredicted RBP20.43■□□□□ 0.86
CACNA1A-258ENST00000638029 PAF1Q8N7H5 531 aa20.43■□□□□ 0.86
CACNA1A-258ENST00000638029 GGT6Q6P531 493 aa20.43■□□□□ 0.86
CACNA1A-258ENST00000638029 EIF4G1Q04637 1599 aaKnown RBP20.41■□□□□ 0.86
CACNA1A-258ENST00000638029 HSP90AA2PQ14568 343 aaPredicted RBP20.41■□□□□ 0.86
CACNA1A-258ENST00000638029 WDR70Q9NW82 654 aa20.41■□□□□ 0.86
CACNA1A-258ENST00000638029 TPM3P06753 285 aa20.4■□□□□ 0.86
CACNA1A-258ENST00000638029 TMF1P82094 1093 aa20.4■□□□□ 0.86
CACNA1A-258ENST00000638029 GPATCH3Q96I76 525 aa20.39■□□□□ 0.86
CACNA1A-258ENST00000638029 MORC1Q86VD1 984 aa20.39■□□□□ 0.85
CACNA1A-258ENST00000638029 NUTM2DQ5VT03 806 aaPredicted RBP20.38■□□□□ 0.85
CACNA1A-258ENST00000638029 PPP4R2Q9NY27 417 aa20.37■□□□□ 0.85
CACNA1A-258ENST00000638029 DHX16O60231 1041 aaKnown RBP20.36■□□□□ 0.85
CACNA1A-258ENST00000638029 DCAF11Q8TEB1 546 aa20.36■□□□□ 0.85
CACNA1A-258ENST00000638029 RRP12Q5JTH9 1297 aaKnown RBP20.36■□□□□ 0.85
CACNA1A-258ENST00000638029 PCMTD1Q96MG8 357 aaPredicted RBP20.36■□□□□ 0.85
CACNA1A-258ENST00000638029 PPM1FP49593 454 aaPredicted RBP20.36■□□□□ 0.85
CACNA1A-258ENST00000638029 SLC4A3P48751 1232 aa20.34■□□□□ 0.85
CACNA1A-258ENST00000638029 ITPRIPQ8IWB1 547 aa20.34■□□□□ 0.85
CACNA1A-258ENST00000638029 CFAP44Q96MT7 982 aa20.34■□□□□ 0.85
CACNA1A-258ENST00000638029 CEP162Q5TB80 1403 aa20.33■□□□□ 0.85
CACNA1A-258ENST00000638029 IBSPP21815 317 aaPredicted RBP20.32■□□□□ 0.84
CACNA1A-258ENST00000638029 CCAR1Q8IX12 1150 aaKnown RBP20.32■□□□□ 0.84
CACNA1A-258ENST00000638029 CCDC43Q96MW1 224 aaKnown RBP20.32■□□□□ 0.84
CACNA1A-258ENST00000638029 SF3A1Q15459 793 aaKnown RBP20.32■□□□□ 0.84
CACNA1A-258ENST00000638029 NOL10Q9BSC4 688 aaKnown RBP20.31■□□□□ 0.84
CACNA1A-258ENST00000638029 VPS37DQ86XT2 251 aa20.31■□□□□ 0.84
CACNA1A-258ENST00000638029 MFAP1P55081 439 aaKnown RBP20.3■□□□□ 0.84
CACNA1A-258ENST00000638029 CCDC34Q96HJ3 373 aa20.3■□□□□ 0.84
CACNA1A-258ENST00000638029 BAZ1BQ9UIG0 1483 aaKnown RBP20.3■□□□□ 0.84
CACNA1A-258ENST00000638029 TSR1Q2NL82 804 aaKnown RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms