RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 SAMD1Q6SPF0 538 aaPredicted RBP21.75■■□□□ 1.07
CACNA1A-253ENST00000637927 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.75■■□□□ 1.07
CACNA1A-253ENST00000637927 FOXD4L1Q9NU39 408 aa21.74■■□□□ 1.07
CACNA1A-253ENST00000637927 TMX4Q9H1E5 349 aaPredicted RBP21.74■■□□□ 1.07
CACNA1A-253ENST00000637927 FOXD4L5Q5VV16 416 aaPredicted RBP21.72■■□□□ 1.07
CACNA1A-253ENST00000637927 FOXD4L4Q8WXT5 416 aaPredicted RBP21.72■■□□□ 1.07
CACNA1A-253ENST00000637927 RASSF8Q8NHQ8 419 aa21.7■■□□□ 1.06
CACNA1A-253ENST00000637927 SRPK2P78362 688 aaKnown RBP21.7■■□□□ 1.06
CACNA1A-253ENST00000637927 PHF23Q9BUL5 403 aaPredicted RBP21.7■■□□□ 1.06
CACNA1A-253ENST00000637927 ERCC6Q03468 1493 aa21.69■■□□□ 1.06
CACNA1A-253ENST00000637927 CHAF1AQ13111 956 aaPredicted RBP21.68■■□□□ 1.06
CACNA1A-253ENST00000637927 PES1O00541 588 aaKnown RBP21.67■■□□□ 1.06
CACNA1A-253ENST00000637927 L1TD1Q5T7N2 865 aaKnown RBP21.67■■□□□ 1.06
CACNA1A-253ENST00000637927 EIF4G1Q04637 1599 aaKnown RBP21.67■■□□□ 1.06
CACNA1A-253ENST00000637927 NUDCQ9Y266 331 aa21.67■■□□□ 1.06
CACNA1A-253ENST00000637927 MSNP26038 577 aaKnown RBP21.67■■□□□ 1.06
CACNA1A-253ENST00000637927 BCL11BQ9C0K0 894 aaPredicted RBP21.67■■□□□ 1.06
CACNA1A-253ENST00000637927 TOMM22Q9NS69 142 aa21.64■■□□□ 1.06
CACNA1A-253ENST00000637927 FBXW7Q969H0 707 aa21.64■■□□□ 1.05
CACNA1A-253ENST00000637927 NRDCO43847 1150 aa21.63■■□□□ 1.05
CACNA1A-253ENST00000637927 DCAF11Q8TEB1 546 aa21.63■■□□□ 1.05
CACNA1A-253ENST00000637927 TAF7LQ5H9L4 462 aa21.61■■□□□ 1.05
CACNA1A-253ENST00000637927 GORABQ5T7V8 394 aa21.61■■□□□ 1.05
CACNA1A-253ENST00000637927 RSF1Q96T23 1441 aaPredicted RBP21.61■■□□□ 1.05
CACNA1A-253ENST00000637927 FRAT2O75474 233 aaPredicted RBP21.61■■□□□ 1.05
CACNA1A-253ENST00000637927 CDCA8Q53HL2 280 aa21.6■■□□□ 1.05
CACNA1A-253ENST00000637927 DCAF1Q9Y4B6 1507 aa21.6■■□□□ 1.05
CACNA1A-253ENST00000637927 NUTM2FA1L443 756 aa21.6■■□□□ 1.05
CACNA1A-253ENST00000637927 MARCH6O60337 910 aa21.59■■□□□ 1.05
CACNA1A-253ENST00000637927 FOXD4L6Q3SYB3 417 aaPredicted RBP21.58■■□□□ 1.04
CACNA1A-253ENST00000637927 FOXD4L3Q6VB84 417 aaPredicted RBP21.58■■□□□ 1.04
CACNA1A-253ENST00000637927 FOXD1Q16676 465 aa21.58■■□□□ 1.04
CACNA1A-253ENST00000637927 HSCBQ8IWL3 235 aa21.58■■□□□ 1.04
CACNA1A-253ENST00000637927 NUTM2DQ5VT03 806 aaPredicted RBP21.56■■□□□ 1.04
CACNA1A-253ENST00000637927 GGT6Q6P531 493 aa21.56■■□□□ 1.04
CACNA1A-253ENST00000637927 MYO15BQ96JP2 1530 aa21.55■■□□□ 1.04
CACNA1A-253ENST00000637927 TNNT3P45378 269 aaPredicted RBP21.55■■□□□ 1.04
CACNA1A-253ENST00000637927 RTF1Q92541 710 aaKnown RBP21.55■■□□□ 1.04
CACNA1A-253ENST00000637927 LTV1Q96GA3 475 aaPredicted RBP21.55■■□□□ 1.04
CACNA1A-253ENST00000637927 CEP162Q5TB80 1403 aa21.52■■□□□ 1.04
CACNA1A-253ENST00000637927 MORC1Q86VD1 984 aa21.5■■□□□ 1.03
CACNA1A-253ENST00000637927 ANP32EQ9BTT0 268 aa21.5■■□□□ 1.03
CACNA1A-253ENST00000637927 NGEFQ8N5V2 710 aa21.49■■□□□ 1.03
CACNA1A-253ENST00000637927 CEP89Q96ST8 783 aa21.49■■□□□ 1.03
CACNA1A-253ENST00000637927 TRIM6-TRIM34B2RNG4 842 aa21.49■■□□□ 1.03
CACNA1A-253ENST00000637927 KIAA1211Q6ZU35 1233 aa21.48■■□□□ 1.03
CACNA1A-253ENST00000637927 MCCP23508 829 aa21.47■■□□□ 1.03
CACNA1A-253ENST00000637927 GTF2E1P29083 439 aaPredicted RBP21.47■■□□□ 1.03
CACNA1A-253ENST00000637927 CCAR2Q8N163 923 aaKnown RBP21.47■■□□□ 1.03
CACNA1A-253ENST00000637927 CWC22Q9HCG8 908 aaKnown RBP21.46■■□□□ 1.03
CACNA1A-253ENST00000637927 GOLGA3Q08378 1498 aa21.46■■□□□ 1.03
CACNA1A-253ENST00000637927 SLKQ9H2G2 1235 aaPredicted RBP21.45■■□□□ 1.02
CACNA1A-253ENST00000637927 SLC4A10Q6U841 1118 aa21.45■■□□□ 1.02
CACNA1A-253ENST00000637927 TMF1P82094 1093 aa21.44■■□□□ 1.02
CACNA1A-253ENST00000637927 KDM4AO75164 1064 aa21.43■■□□□ 1.02
CACNA1A-253ENST00000637927 NOP58Q9Y2X3 529 aaKnown RBP21.43■■□□□ 1.02
CACNA1A-253ENST00000637927 VSIG10Q8N0Z9 540 aa21.42■■□□□ 1.02
CACNA1A-253ENST00000637927 TCEAL9Q9UHQ7 104 aa21.4■■□□□ 1.02
CACNA1A-253ENST00000637927 DHX37Q8IY37 1157 aaKnown RBP21.38■■□□□ 1.01
CACNA1A-253ENST00000637927 PPP4R2Q9NY27 417 aa21.38■■□□□ 1.01
CACNA1A-253ENST00000637927 CCNB3Q8WWL7 1395 aa21.38■■□□□ 1.01
CACNA1A-253ENST00000637927 ITPRIPQ8IWB1 547 aa21.38■■□□□ 1.01
CACNA1A-253ENST00000637927 KANK1Q14678 1352 aa21.38■■□□□ 1.01
CACNA1A-253ENST00000637927 MEX3CQ5U5Q3 659 aaKnown RBP21.38■■□□□ 1.01
CACNA1A-253ENST00000637927 FOSBP53539 338 aa21.37■■□□□ 1.01
CACNA1A-253ENST00000637927 PPP1R1BQ9UD71 204 aaPredicted RBP21.37■■□□□ 1.01
CACNA1A-253ENST00000637927 AEBP2Q6ZN18 517 aaPredicted RBP21.37■■□□□ 1.01
CACNA1A-253ENST00000637927 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.36■■□□□ 1.017e-11■■■■■ 260.8
CACNA1A-253ENST00000637927 GOLGA6L1Q8N7Z2 621 aa21.36■■□□□ 1.01
CACNA1A-253ENST00000637927 CTDP1Q9Y5B0 961 aaPredicted RBP21.36■■□□□ 1.01
CACNA1A-253ENST00000637927 IBSPP21815 317 aaPredicted RBP21.35■■□□□ 1.01
CACNA1A-253ENST00000637927 MTMR7Q9Y216 660 aa21.35■■□□□ 1.01
CACNA1A-253ENST00000637927 BAZ1BQ9UIG0 1483 aaKnown RBP21.34■■□□□ 1.01
CACNA1A-253ENST00000637927 MFAP1P55081 439 aaKnown RBP21.34■■□□□ 1.01
CACNA1A-253ENST00000637927 PTMSP20962 102 aa21.34■■□□□ 1.01
CACNA1A-253ENST00000637927 TPD52L1Q16890 204 aaPredicted RBP21.33■■□□□ 1.01
CACNA1A-253ENST00000637927 SYTL4Q96C24 671 aaPredicted RBP21.33■■□□□ 1.01
CACNA1A-253ENST00000637927 SLC4A3P48751 1232 aa21.32■■□□□ 1
CACNA1A-253ENST00000637927 CCDC146Q8IYE0 955 aa21.32■■□□□ 1
CACNA1A-253ENST00000637927 SKIDA1Q1XH10 827 aa21.31■■□□□ 1
CACNA1A-253ENST00000637927 U2AF1L5P0DN76 240 aaPredicted RBP21.29■■□□□ 1
CACNA1A-253ENST00000637927 U2AF1Q01081 240 aaKnown RBP eCLIP21.29■■□□□ 1
CACNA1A-253ENST00000637927 TRIM34Q9BYJ4 488 aa21.29■■□□□ 1
CACNA1A-253ENST00000637927 HDGFL2Q7Z4V5 671 aaPredicted RBP21.29■■□□□ 1
CACNA1A-253ENST00000637927 PCMTD1Q96MG8 357 aaPredicted RBP21.29■■□□□ 1
CACNA1A-253ENST00000637927 WRNQ14191 1432 aaPredicted RBP eCLIP21.27■■□□□ 1
CACNA1A-253ENST00000637927 NECTIN2Q92692 538 aa21.26■□□□□ 0.99
CACNA1A-253ENST00000637927 HSPA5P11021 654 aaKnown RBP21.26■□□□□ 0.99
CACNA1A-253ENST00000637927 KIF27Q86VH2 1401 aa21.26■□□□□ 0.99
CACNA1A-253ENST00000637927 HDGFP51858 240 aaKnown RBP21.26■□□□□ 0.99
CACNA1A-253ENST00000637927 DHX16O60231 1041 aaKnown RBP21.26■□□□□ 0.99
CACNA1A-253ENST00000637927 MS4A1P11836 297 aa21.26■□□□□ 0.99
CACNA1A-253ENST00000637927 DEKP35659 375 aaKnown RBP21.25■□□□□ 0.99
CACNA1A-253ENST00000637927 TPM4P67936 248 aa21.25■□□□□ 0.99
CACNA1A-253ENST00000637927 CHMP4BQ9H444 224 aaKnown RBP21.25■□□□□ 0.99
CACNA1A-253ENST00000637927 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.25■□□□□ 0.99
CACNA1A-253ENST00000637927 ZNF428Q96B54 188 aa21.25■□□□□ 0.99
CACNA1A-253ENST00000637927 FYB1O15117 783 aa21.25■□□□□ 0.99
CACNA1A-253ENST00000637927 WDR70Q9NW82 654 aa21.24■□□□□ 0.99
CACNA1A-253ENST00000637927 RB1CC1Q8TDY2 1594 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms