RNA–Protein interactions for RNA: ENST00000637923.2

TCF4-288, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 7,314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-288ENST00000637923 NGEFQ8N5V2 710 aa6.95□□□□□ -1.3
TCF4-288ENST00000637923 FBXO3Q9UK99 471 aa6.95□□□□□ -1.3
TCF4-288ENST00000637923 RSF1Q96T23 1441 aaPredicted RBP6.94□□□□□ -1.3
TCF4-288ENST00000637923 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.94□□□□□ -1.3
TCF4-288ENST00000637923 MORC1Q86VD1 984 aa6.93□□□□□ -1.3
TCF4-288ENST00000637923 CNKSR2Q8WXI2 1034 aa6.93□□□□□ -1.3
TCF4-288ENST00000637923 NUTM2BA6NNL0 878 aaPredicted RBP6.93□□□□□ -1.3
TCF4-288ENST00000637923 NUTM2EB1AL46 878 aaPredicted RBP6.93□□□□□ -1.3
TCF4-288ENST00000637923 HDGFL2Q7Z4V5 671 aaPredicted RBP6.93□□□□□ -1.3
TCF4-288ENST00000637923 NUTM2AQ8IVF1 878 aaPredicted RBP6.93□□□□□ -1.3
TCF4-288ENST00000637923 CCNB3Q8WWL7 1395 aa6.93□□□□□ -1.3
TCF4-288ENST00000637923 PTMAP06454 111 aaKnown RBP6.93□□□□□ -1.3
TCF4-288ENST00000637923 FOXD1Q16676 465 aa6.92□□□□□ -1.3
TCF4-288ENST00000637923 RGS3P49796 1198 aa6.92□□□□□ -1.3
TCF4-288ENST00000637923 ERICH6BQ5W0A0 696 aa6.92□□□□□ -1.3
TCF4-288ENST00000637923 AMPHP49418 695 aa6.91□□□□□ -1.3
TCF4-288ENST00000637923 SF3B2Q13435 895 aaKnown RBP6.91□□□□□ -1.3
TCF4-288ENST00000637923 KIF3BO15066 747 aa6.91□□□□□ -1.3
TCF4-288ENST00000637923 SPRYD3Q8NCJ5 442 aa6.91□□□□□ -1.3
TCF4-288ENST00000637923 TOMM22Q9NS69 142 aa6.91□□□□□ -1.3
TCF4-288ENST00000637923 WASHC2CQ9Y4E1 1318 aa6.9□□□□□ -1.3
TCF4-288ENST00000637923 USP35Q9P2H5 1018 aa6.9□□□□□ -1.31
TCF4-288ENST00000637923 CLIP1P30622 1438 aa6.9□□□□□ -1.31
TCF4-288ENST00000637923 CTDP1Q9Y5B0 961 aaPredicted RBP6.9□□□□□ -1.31
TCF4-288ENST00000637923 DNTTIP2Q5QJE6 756 aaKnown RBP6.89□□□□□ -1.31
TCF4-288ENST00000637923 PNNQ9H307 717 aaKnown RBP6.89□□□□□ -1.31
TCF4-288ENST00000637923 CREBRFQ8IUR6 639 aa6.89□□□□□ -1.31
TCF4-288ENST00000637923 TRIM34Q9BYJ4 488 aa6.89□□□□□ -1.31
TCF4-288ENST00000637923 HNRNPMP52272 730 aaKnown RBP eCLIP6.88□□□□□ -1.31
TCF4-288ENST00000637923 SLC4A10Q6U841 1118 aa6.88□□□□□ -1.31
TCF4-288ENST00000637923 FAM69CQ0P6D2 419 aa6.88□□□□□ -1.31
TCF4-288ENST00000637923 SIN3AQ96ST3 1273 aa6.88□□□□□ -1.31
TCF4-288ENST00000637923 GOLGA6L22H0YM25 854 aa6.88□□□□□ -1.31
TCF4-288ENST00000637923 TMF1P82094 1093 aa6.88□□□□□ -1.31
TCF4-288ENST00000637923 BECN1Q14457 450 aa6.87□□□□□ -1.31
TCF4-288ENST00000637923 HSP90AB1P08238 724 aaKnown RBP6.87□□□□□ -1.31
TCF4-288ENST00000637923 MARCH6O60337 910 aa6.87□□□□□ -1.31
TCF4-288ENST00000637923 HSP90B1P14625 803 aaKnown RBP6.87□□□□□ -1.31
TCF4-288ENST00000637923 GOLGA6L4A6NEF3 574 aa6.86□□□□□ -1.31
TCF4-288ENST00000637923 CECR2Q9BXF3 1484 aa6.86□□□□□ -1.31
TCF4-288ENST00000637923 TRIM44Q96DX7 344 aaPredicted RBP6.86□□□□□ -1.31
TCF4-288ENST00000637923 RASSF8Q8NHQ8 419 aa6.86□□□□□ -1.31
TCF4-288ENST00000637923 PSME1Q06323 249 aa6.85□□□□□ -1.31
TCF4-288ENST00000637923 NUTM2GQ5VZR2 741 aa6.85□□□□□ -1.31
TCF4-288ENST00000637923 U2AF1L5P0DN76 240 aaPredicted RBP6.85□□□□□ -1.31
TCF4-288ENST00000637923 U2AF1Q01081 240 aaKnown RBP eCLIP6.85□□□□□ -1.31
TCF4-288ENST00000637923 B4GALNT3Q6L9W6 998 aa6.85□□□□□ -1.31
TCF4-288ENST00000637923 TCEAL9Q9UHQ7 104 aa6.85□□□□□ -1.31
TCF4-288ENST00000637923 ATF3P18847 181 aa6.85□□□□□ -1.31
TCF4-288ENST00000637923 OSCARQ8IYS5 282 aa6.85□□□□□ -1.31
TCF4-288ENST00000637923 FAM177BA6PVY3 158 aa6.84□□□□□ -1.31
TCF4-288ENST00000637923 NECTIN2Q92692 538 aa6.84□□□□□ -1.31
TCF4-288ENST00000637923 KIF27Q86VH2 1401 aa6.84□□□□□ -1.31
TCF4-288ENST00000637923 C1orf141Q5JVX7 400 aa6.84□□□□□ -1.32
TCF4-288ENST00000637923 SPAG9O60271 1321 aaKnown RBP6.83□□□□□ -1.32
TCF4-288ENST00000637923 SLC4A3P48751 1232 aa6.83□□□□□ -1.32
TCF4-288ENST00000637923 TRAK1Q9UPV9 953 aa6.83□□□□□ -1.32
TCF4-288ENST00000637923 TDRD9Q8NDG6 1382 aaKnown RBP6.83□□□□□ -1.32
TCF4-288ENST00000637923 KIAA1211Q6ZU35 1233 aa6.83□□□□□ -1.32
TCF4-288ENST00000637923 DRC7Q8IY82 874 aa6.83□□□□□ -1.32
TCF4-288ENST00000637923 NOL8Q76FK4 1167 aaKnown RBP6.83□□□□□ -1.32
TCF4-288ENST00000637923 TRIM6-TRIM34B2RNG4 842 aa6.82□□□□□ -1.32
TCF4-288ENST00000637923 EFCAB2Q5VUJ9 269 aa6.82□□□□□ -1.32
TCF4-288ENST00000637923 CFAP44Q96MT7 982 aa6.82□□□□□ -1.32
TCF4-288ENST00000637923 CUX2O14529 1486 aa6.82□□□□□ -1.32
TCF4-288ENST00000637923 PKD2Q13563 968 aa6.82□□□□□ -1.32
TCF4-288ENST00000637923 VPS37DQ86XT2 251 aa6.82□□□□□ -1.32
TCF4-288ENST00000637923 PAXIP1Q6ZW49 1069 aaPredicted RBP6.82□□□□□ -1.32
TCF4-288ENST00000637923 STRN4Q9NRL3 753 aa6.82□□□□□ -1.32
TCF4-288ENST00000637923 CARMIL2Q6F5E8 1435 aa6.82□□□□□ -1.32
TCF4-288ENST00000637923 NOC3LQ8WTT2 800 aaKnown RBP6.82□□□□□ -1.32
TCF4-288ENST00000637923 STK31Q9BXU1 1019 aa6.82□□□□□ -1.32
TCF4-288ENST00000637923 GOLGA6L6A8MZA4 724 aa6.82□□□□□ -1.32
TCF4-288ENST00000637923 ITPRIPQ8IWB1 547 aa6.82□□□□□ -1.32
TCF4-288ENST00000637923 EIF2S2P20042 333 aaKnown RBP6.81□□□□□ -1.32
TCF4-288ENST00000637923 KIAA2012Q0VF49 1180 aa6.81□□□□□ -1.32
TCF4-288ENST00000637923 CCAR1Q8IX12 1150 aaKnown RBP6.81□□□□□ -1.32
TCF4-288ENST00000637923 FYB1O15117 783 aa6.81□□□□□ -1.32
TCF4-288ENST00000637923 L1TD1Q5T7N2 865 aaKnown RBP6.81□□□□□ -1.32
TCF4-288ENST00000637923 MCCP23508 829 aa6.81□□□□□ -1.32
TCF4-288ENST00000637923 CCDC146Q8IYE0 955 aa6.81□□□□□ -1.32
TCF4-288ENST00000637923 IBSPP21815 317 aaPredicted RBP6.8□□□□□ -1.32
TCF4-288ENST00000637923 NOL10Q9BSC4 688 aaKnown RBP6.8□□□□□ -1.32
TCF4-288ENST00000637923 DHX16O60231 1041 aaKnown RBP6.8□□□□□ -1.32
TCF4-288ENST00000637923 TTC5Q8N0Z6 440 aa6.8□□□□□ -1.32
TCF4-288ENST00000637923 ZNF428Q96B54 188 aa6.8□□□□□ -1.32
TCF4-288ENST00000637923 MTMR7Q9Y216 660 aa6.8□□□□□ -1.32
TCF4-288ENST00000637923 SUPT16HQ9Y5B9 1047 aaKnown RBP6.8□□□□□ -1.32
TCF4-288ENST00000637923 WRNQ14191 1432 aaPredicted RBP eCLIP6.8□□□□□ -1.32
TCF4-288ENST00000637923 MIER1Q8N108 512 aa6.8□□□□□ -1.32
TCF4-288ENST00000637923 RBM33Q96EV2 1170 aaKnown RBP6.8□□□□□ -1.32
TCF4-288ENST00000637923 ROCK2O75116 1388 aaKnown RBP6.79□□□□□ -1.32
TCF4-288ENST00000637923 SMARCA2P51531 1590 aa6.79□□□□□ -1.32
TCF4-288ENST00000637923 ACIN1Q9UKV3 1341 aaKnown RBP6.79□□□□□ -1.32
TCF4-288ENST00000637923 MINK1Q8N4C8 1332 aaPredicted RBP6.78□□□□□ -1.32
TCF4-288ENST00000637923 ELL2O00472 640 aaPredicted RBP6.78□□□□□ -1.32
TCF4-288ENST00000637923 CHMP4BQ9H444 224 aaKnown RBP6.78□□□□□ -1.32
TCF4-288ENST00000637923 TCERG1O14776 1098 aaKnown RBP6.78□□□□□ -1.32
TCF4-288ENST00000637923 CARMIL1Q5VZK9 1371 aa6.78□□□□□ -1.32
TCF4-288ENST00000637923 PLIN1O60240 522 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms