RNA–Protein interactions for RNA: ENST00000637844.1

CACNA1D-227, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-227ENST00000637844 CROCC2H7BZ55 1655 aa9.26□□□□□ -0.93
CACNA1D-227ENST00000637844 KDM5BQ9UGL1 1544 aa9.26□□□□□ -0.93
CACNA1D-227ENST00000637844 DAPK1P53355 1430 aa9.26□□□□□ -0.93
CACNA1D-227ENST00000637844 ZNF777Q9ULD5 760 aaPredicted RBP9.24□□□□□ -0.93
CACNA1D-227ENST00000637844 ROCK1Q13464 1354 aa9.24□□□□□ -0.93
CACNA1D-227ENST00000637844 NAIPQ13075 1403 aa9.23□□□□□ -0.93
CACNA1D-227ENST00000637844 PTPRKQ15262 1439 aa9.23□□□□□ -0.93
CACNA1D-227ENST00000637844 CDC42BPBQ9Y5S2 1711 aa9.23□□□□□ -0.93
CACNA1D-227ENST00000637844 ARHGAP5Q13017 1502 aa9.23□□□□□ -0.93
CACNA1D-227ENST00000637844 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.23□□□□□ -0.93
CACNA1D-227ENST00000637844 NPM1P06748 294 aaKnown RBP eCLIP9.23□□□□□ -0.93
CACNA1D-227ENST00000637844 TTC37Q6PGP7 1564 aa9.23□□□□□ -0.93
CACNA1D-227ENST00000637844 ARHGEF5Q12774 1597 aa9.22□□□□□ -0.93
CACNA1D-227ENST00000637844 ABCC5O15440 1437 aa9.22□□□□□ -0.93
CACNA1D-227ENST00000637844 PLEKHH2Q8IVE3 1493 aa9.21□□□□□ -0.93
CACNA1D-227ENST00000637844 SHANK2Q9UPX8 1470 aa9.21□□□□□ -0.93
CACNA1D-227ENST00000637844 DNAJC5Q9H3Z4 198 aa9.21□□□□□ -0.94
CACNA1D-227ENST00000637844 CHIC2Q9UKJ5 165 aa9.21□□□□□ -0.94
CACNA1D-227ENST00000637844 RSPH4AQ5TD94 716 aa9.2□□□□□ -0.94
CACNA1D-227ENST00000637844 WDR7Q9Y4E6 1490 aa9.2□□□□□ -0.94
CACNA1D-227ENST00000637844 SAMD9LQ8IVG5 1584 aa9.2□□□□□ -0.94
CACNA1D-227ENST00000637844 TSPY4P0CV99 314 aa9.19□□□□□ -0.94
CACNA1D-227ENST00000637844 TSPY10P0CW01 314 aa9.19□□□□□ -0.94
CACNA1D-227ENST00000637844 KCNH8Q96L42 1107 aa9.19□□□□□ -0.94
CACNA1D-227ENST00000637844 RRP7BPQ9NSQ0 103 aa9.19□□□□□ -0.94
CACNA1D-227ENST00000637844 ZNF644Q9H582 1327 aaPredicted RBP9.19□□□□□ -0.94
CACNA1D-227ENST00000637844 ANKRD30AQ9BXX3 1397 aa9.19□□□□□ -0.94
CACNA1D-227ENST00000637844 ADGRL2O95490 1459 aa9.19□□□□□ -0.94
CACNA1D-227ENST00000637844 MAPKBP1O60336 1514 aa9.18□□□□□ -0.94
CACNA1D-227ENST00000637844 CCDC141Q6ZP82 1450 aa9.18□□□□□ -0.94
CACNA1D-227ENST00000637844 ARAP3Q8WWN8 1544 aa9.18□□□□□ -0.94
CACNA1D-227ENST00000637844 ABCA9Q8IUA7 1624 aa9.17□□□□□ -0.94
CACNA1D-227ENST00000637844 PLCH2O75038 1416 aa9.17□□□□□ -0.94
CACNA1D-227ENST00000637844 CFAP74Q9C0B2 1584 aa9.16□□□□□ -0.94
CACNA1D-227ENST00000637844 MAST1Q9Y2H9 1570 aa9.16□□□□□ -0.94
CACNA1D-227ENST00000637844 C9orf84Q5VXU9 1444 aa9.16□□□□□ -0.94
CACNA1D-227ENST00000637844 EFCAB2Q5VUJ9 269 aa9.16□□□□□ -0.94
CACNA1D-227ENST00000637844 TRIM52Q96A61 297 aa9.16□□□□□ -0.94
CACNA1D-227ENST00000637844 SYCP2Q9BX26 1530 aa9.15□□□□□ -0.94
CACNA1D-227ENST00000637844 ASXL2Q76L83 1435 aa9.15□□□□□ -0.94
CACNA1D-227ENST00000637844 KIAA1107Q9UPP5 1409 aa9.15□□□□□ -0.94
CACNA1D-227ENST00000637844 NCOA1Q15788 1441 aa9.14□□□□□ -0.95
CACNA1D-227ENST00000637844 RIMBP3CA6NJZ7 1639 aa9.14□□□□□ -0.95
CACNA1D-227ENST00000637844 RIMBP3BA6NNM3 1639 aa9.14□□□□□ -0.95
CACNA1D-227ENST00000637844 KDM6BO15054 1643 aa9.14□□□□□ -0.95
CACNA1D-227ENST00000637844 RIMBP3Q9UFD9 1639 aa9.14□□□□□ -0.95
CACNA1D-227ENST00000637844 TIMELESSQ9UNS1 1208 aa9.14□□□□□ -0.95
CACNA1D-227ENST00000637844 ABCC1P33527 1531 aa9.14□□□□□ -0.95
CACNA1D-227ENST00000637844 MBD5Q9P267 1494 aa9.14□□□□□ -0.95
CACNA1D-227ENST00000637844 HNRNPMP52272 730 aaKnown RBP eCLIP9.13□□□□□ -0.95
CACNA1D-227ENST00000637844 PLXNC1O60486 1568 aa9.12□□□□□ -0.95
CACNA1D-227ENST00000637844 ANKRD50Q9ULJ7 1429 aa9.12□□□□□ -0.95
CACNA1D-227ENST00000637844 KIF15Q9NS87 1388 aa9.11□□□□□ -0.95
CACNA1D-227ENST00000637844 FANCAO15360 1455 aa9.1□□□□□ -0.95
CACNA1D-227ENST00000637844 NEUROD1Q13562 356 aa9.1□□□□□ -0.95
CACNA1D-227ENST00000637844 TONSLQ96HA7 1378 aa9.1□□□□□ -0.95
CACNA1D-227ENST00000637844 ZNF316A6NFI3 1004 aaPredicted RBP9.09□□□□□ -0.95
CACNA1D-227ENST00000637844 MPHOSPH9Q99550 1183 aa9.09□□□□□ -0.95
CACNA1D-227ENST00000637844 DUOX2Q9NRD8 1548 aa9.09□□□□□ -0.95
CACNA1D-227ENST00000637844 SLC4A1APQ9BWU0 796 aaKnown RBP9.08□□□□□ -0.96
CACNA1D-227ENST00000637844 ADGRL1O94910 1474 aa9.08□□□□□ -0.96
CACNA1D-227ENST00000637844 RTEL1-TNFRSF6BF6WH68 1400 aa9.07□□□□□ -0.96
CACNA1D-227ENST00000637844 KDM5DQ9BY66 1539 aa9.07□□□□□ -0.96
CACNA1D-227ENST00000637844 UNC13BO14795 1591 aa9.07□□□□□ -0.96
CACNA1D-227ENST00000637844 CD109Q6YHK3 1445 aa9.06□□□□□ -0.96
CACNA1D-227ENST00000637844 ERBINQ96RT1 1412 aa9.06□□□□□ -0.96
CACNA1D-227ENST00000637844 ARHGEF12Q9NZN5 1544 aa9.06□□□□□ -0.96
CACNA1D-227ENST00000637844 CYB5RLQ6IPT4 315 aa9.06□□□□□ -0.96
CACNA1D-227ENST00000637844 SIN3AQ96ST3 1273 aa9.06□□□□□ -0.96
CACNA1D-227ENST00000637844 SPAG9O60271 1321 aaKnown RBP9.05□□□□□ -0.96
CACNA1D-227ENST00000637844 INO80Q9ULG1 1556 aaPredicted RBP9.05□□□□□ -0.96
CACNA1D-227ENST00000637844 PZPP20742 1482 aa9.05□□□□□ -0.96
CACNA1D-227ENST00000637844 ATP7AQ04656 1500 aa9.05□□□□□ -0.96
CACNA1D-227ENST00000637844 ZFYVE16Q7Z3T8 1539 aa9.05□□□□□ -0.96
CACNA1D-227ENST00000637844 GLI2P10070 1586 aa9.04□□□□□ -0.96
CACNA1D-227ENST00000637844 NUP155O75694 1391 aa9.04□□□□□ -0.96
CACNA1D-227ENST00000637844 MYT1LQ9UL68 1186 aa9.04□□□□□ -0.96
CACNA1D-227ENST00000637844 MAP3K4Q9Y6R4 1608 aa9.04□□□□□ -0.96
CACNA1D-227ENST00000637844 SCAPERQ9BY12 1400 aa9.04□□□□□ -0.96
CACNA1D-227ENST00000637844 TRAPPC8Q9Y2L5 1435 aa9.04□□□□□ -0.96
CACNA1D-227ENST00000637844 ZNF518AQ6AHZ1 1483 aa9.03□□□□□ -0.96
CACNA1D-227ENST00000637844 NEO1Q92859 1461 aa9.03□□□□□ -0.96
CACNA1D-227ENST00000637844 IQGAP3Q86VI3 1631 aa9.03□□□□□ -0.96
CACNA1D-227ENST00000637844 DENND4BO75064 1496 aaPredicted RBP9.02□□□□□ -0.96
CACNA1D-227ENST00000637844 EIF2AK4Q9P2K8 1649 aaKnown RBP9.02□□□□□ -0.96
CACNA1D-227ENST00000637844 RPRD2Q5VT52 1461 aaKnown RBP9.02□□□□□ -0.97
CACNA1D-227ENST00000637844 ANKRD30BQ9BXX2 1392 aa9.01□□□□□ -0.97
CACNA1D-227ENST00000637844 FAM135AQ9P2D6 1515 aa9.01□□□□□ -0.97
CACNA1D-227ENST00000637844 DIP2BQ9P265 1576 aa9□□□□□ -0.97
CACNA1D-227ENST00000637844 HECW2Q9P2P5 1572 aa9□□□□□ -0.97
CACNA1D-227ENST00000637844 PPP1R15AO75807 674 aaPredicted RBP9□□□□□ -0.97
CACNA1D-227ENST00000637844 PKD2Q13563 968 aa9□□□□□ -0.97
CACNA1D-227ENST00000637844 DIEXFQ68CQ4 756 aaKnown RBP9□□□□□ -0.97
CACNA1D-227ENST00000637844 KANK1Q14678 1352 aa8.99□□□□□ -0.97
CACNA1D-227ENST00000637844 POGZQ7Z3K3 1410 aa8.99□□□□□ -0.97
CACNA1D-227ENST00000637844 DEPDC5O75140 1603 aa8.99□□□□□ -0.97
CACNA1D-227ENST00000637844 AFAP1Q8N556 730 aa8.99□□□□□ -0.97
CACNA1D-227ENST00000637844 MAGI2Q86UL8 1455 aa8.99□□□□□ -0.97
CACNA1D-227ENST00000637844 KDM5CP41229 1560 aa8.99□□□□□ -0.97
CACNA1D-227ENST00000637844 TEX14Q8IWB6 1497 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms