RNA–Protein interactions for RNA: ENST00000637367.1

SCN2A-216, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 4,408 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-216ENST00000637367 SOX12O15370 315 aa8.34□□□□□ -1.07
SCN2A-216ENST00000637367 PLIN1O60240 522 aa8.34□□□□□ -1.07
SCN2A-216ENST00000637367 CLUAP1Q96AJ1 413 aa8.34□□□□□ -1.07
SCN2A-216ENST00000637367 TCERG1O14776 1098 aaKnown RBP8.34□□□□□ -1.08
SCN2A-216ENST00000637367 ARHGAP35Q9NRY4 1499 aa8.33□□□□□ -1.08
SCN2A-216ENST00000637367 HSCBQ8IWL3 235 aa8.33□□□□□ -1.08
SCN2A-216ENST00000637367 NACADO15069 1562 aa8.33□□□□□ -1.08
SCN2A-216ENST00000637367 CCDC146Q8IYE0 955 aa8.32□□□□□ -1.08
SCN2A-216ENST00000637367 RAPGEF2Q9Y4G8 1499 aa8.32□□□□□ -1.08
SCN2A-216ENST00000637367 UNC13AQ9UPW8 1703 aa8.32□□□□□ -1.08
SCN2A-216ENST00000637367 POGKQ9P215 609 aa8.32□□□□□ -1.08
SCN2A-216ENST00000637367 KTN1Q86UP2 1357 aaKnown RBP8.31□□□□□ -1.08
SCN2A-216ENST00000637367 MORC1Q86VD1 984 aa8.31□□□□□ -1.08
SCN2A-216ENST00000637367 EXOC6Q8TAG9 804 aa8.31□□□□□ -1.08
SCN2A-216ENST00000637367 EIF4G1Q04637 1599 aaKnown RBP8.31□□□□□ -1.08
SCN2A-216ENST00000637367 PRKRIP1Q9H875 184 aaPredicted RBP8.3□□□□□ -1.08
SCN2A-216ENST00000637367 CASC1Q6TDU7 716 aa8.3□□□□□ -1.08
SCN2A-216ENST00000637367 FOXD4L1Q9NU39 408 aa8.3□□□□□ -1.08
SCN2A-216ENST00000637367 MFAP1P55081 439 aaKnown RBP8.29□□□□□ -1.08
SCN2A-216ENST00000637367 PNNQ9H307 717 aaKnown RBP8.29□□□□□ -1.08
SCN2A-216ENST00000637367 NUP155O75694 1391 aa8.29□□□□□ -1.08
SCN2A-216ENST00000637367 U2AF1L5P0DN76 240 aaPredicted RBP8.29□□□□□ -1.08
SCN2A-216ENST00000637367 PDE4AP27815 886 aa8.29□□□□□ -1.08
SCN2A-216ENST00000637367 U2AF1Q01081 240 aaKnown RBP eCLIP8.29□□□□□ -1.08
SCN2A-216ENST00000637367 L1TD1Q5T7N2 865 aaKnown RBP8.28□□□□□ -1.08
SCN2A-216ENST00000637367 ST20-MTHFSA0A0A6YYL1 179 aa8.28□□□□□ -1.08
SCN2A-216ENST00000637367 SRPK2P78362 688 aaKnown RBP8.28□□□□□ -1.08
SCN2A-216ENST00000637367 STK26Q9P289 416 aa8.28□□□□□ -1.08
SCN2A-216ENST00000637367 FHOD3Q2V2M9 1422 aa8.28□□□□□ -1.08
SCN2A-216ENST00000637367 TDRD9Q8NDG6 1382 aaKnown RBP8.28□□□□□ -1.08
SCN2A-216ENST00000637367 AMER1Q5JTC6 1135 aaPredicted RBP8.28□□□□□ -1.08
SCN2A-216ENST00000637367 BCL2L13Q9BXK5 485 aa8.28□□□□□ -1.08
SCN2A-216ENST00000637367 ROCK2O75116 1388 aaKnown RBP8.28□□□□□ -1.08
SCN2A-216ENST00000637367 WIZO95785 1651 aa8.28□□□□□ -1.08
SCN2A-216ENST00000637367 MSNP26038 577 aaKnown RBP8.27□□□□□ -1.09
SCN2A-216ENST00000637367 LMOD2Q6P5Q4 547 aa8.27□□□□□ -1.09
SCN2A-216ENST00000637367 NLRP13Q86W25 1043 aa8.27□□□□□ -1.09
SCN2A-216ENST00000637367 ITPRIPQ8IWB1 547 aa8.27□□□□□ -1.09
SCN2A-216ENST00000637367 RALBP1Q15311 655 aa8.27□□□□□ -1.09
SCN2A-216ENST00000637367 ZRSR1Q15695 479 aaKnown RBP8.26□□□□□ -1.09
SCN2A-216ENST00000637367 RRP7AQ9Y3A4 280 aaKnown RBP8.26□□□□□ -1.09
SCN2A-216ENST00000637367 KCNJ4P48050 445 aa8.26□□□□□ -1.09
SCN2A-216ENST00000637367 GOLGA2Q08379 1002 aa8.26□□□□□ -1.09
SCN2A-216ENST00000637367 OS9Q13438 667 aaPredicted RBP8.26□□□□□ -1.09
SCN2A-216ENST00000637367 NAP1L2Q9ULW6 460 aaPredicted RBP8.26□□□□□ -1.09
SCN2A-216ENST00000637367 FMN1Q68DA7 1419 aa8.26□□□□□ -1.09
SCN2A-216ENST00000637367 MS4A1P11836 297 aa8.25□□□□□ -1.09
SCN2A-216ENST00000637367 FGD1P98174 961 aa8.25□□□□□ -1.09
SCN2A-216ENST00000637367 GGT6Q6P531 493 aa8.25□□□□□ -1.09
SCN2A-216ENST00000637367 CRBNQ96SW2 442 aa8.25□□□□□ -1.09
SCN2A-216ENST00000637367 FANCIQ9NVI1 1328 aa8.24□□□□□ -1.09
SCN2A-216ENST00000637367 RWDD1Q9H446 243 aaPredicted RBP8.23□□□□□ -1.09
SCN2A-216ENST00000637367 GOLGA6L3A6NEY3 463 aa8.23□□□□□ -1.09
SCN2A-216ENST00000637367 ZBED9Q6R2W3 1325 aa8.23□□□□□ -1.09
SCN2A-216ENST00000637367 NOL8Q76FK4 1167 aaKnown RBP8.23□□□□□ -1.09
SCN2A-216ENST00000637367 HNRNPMP52272 730 aaKnown RBP eCLIP8.23□□□□□ -1.09
SCN2A-216ENST00000637367 RRP1P56182 461 aaKnown RBP8.23□□□□□ -1.09
SCN2A-216ENST00000637367 NUTM2DQ5VT03 806 aaPredicted RBP8.23□□□□□ -1.09
SCN2A-216ENST00000637367 SMC4Q9NTJ3 1288 aa8.23□□□□□ -1.09
SCN2A-216ENST00000637367 MLECQ14165 292 aa8.22□□□□□ -1.09
SCN2A-216ENST00000637367 FOXD4L5Q5VV16 416 aaPredicted RBP8.22□□□□□ -1.09
SCN2A-216ENST00000637367 FOXD4L4Q8WXT5 416 aaPredicted RBP8.22□□□□□ -1.09
SCN2A-216ENST00000637367 PANK3Q9H999 370 aa8.22□□□□□ -1.09
SCN2A-216ENST00000637367 GOLGA6L4A6NEF3 574 aa8.22□□□□□ -1.09
SCN2A-216ENST00000637367 GSE1Q14687 1217 aa8.21□□□□□ -1.09
SCN2A-216ENST00000637367 GBP4Q96PP9 640 aa8.21□□□□□ -1.09
SCN2A-216ENST00000637367 COG6Q9Y2V7 657 aa8.21□□□□□ -1.09
SCN2A-216ENST00000637367 CENPJQ9HC77 1338 aaPredicted RBP8.21□□□□□ -1.1
SCN2A-216ENST00000637367 ELL2O00472 640 aaPredicted RBP8.21□□□□□ -1.1
SCN2A-216ENST00000637367 CHMP4BQ9H444 224 aaKnown RBP8.2□□□□□ -1.1
SCN2A-216ENST00000637367 PAK3O75914 559 aaPredicted RBP8.2□□□□□ -1.1
SCN2A-216ENST00000637367 PDE3BQ13370 1112 aa8.2□□□□□ -1.1
SCN2A-216ENST00000637367 TULP1O00294 542 aaPredicted RBP8.19□□□□□ -1.1
SCN2A-216ENST00000637367 APAF1O14727 1248 aa8.19□□□□□ -1.1
SCN2A-216ENST00000637367 FOXD4L6Q3SYB3 417 aaPredicted RBP8.19□□□□□ -1.1
SCN2A-216ENST00000637367 FOXD4L3Q6VB84 417 aaPredicted RBP8.19□□□□□ -1.1
SCN2A-216ENST00000637367 DRC7Q8IY82 874 aa8.19□□□□□ -1.1
SCN2A-216ENST00000637367 MYBBP1AQ9BQG0 1328 aaKnown RBP8.19□□□□□ -1.1
SCN2A-216ENST00000637367 IPO8O15397 1037 aaKnown RBP8.19□□□□□ -1.1
SCN2A-216ENST00000637367 FAM161AQ3B820 660 aa8.19□□□□□ -1.1
SCN2A-216ENST00000637367 PMFBP1Q8TBY8 1022 aa8.18□□□□□ -1.1
SCN2A-216ENST00000637367 USP47Q96K76 1375 aa8.17□□□□□ -1.1
SCN2A-216ENST00000637367 ANKRD30AQ9BXX3 1397 aa8.17□□□□□ -1.1
SCN2A-216ENST00000637367 CHAF1AQ13111 956 aaPredicted RBP8.17□□□□□ -1.1
SCN2A-216ENST00000637367 TRAK1Q9UPV9 953 aa8.17□□□□□ -1.1
SCN2A-216ENST00000637367 USP35Q9P2H5 1018 aa8.17□□□□□ -1.1
SCN2A-216ENST00000637367 WASHC2AQ641Q2 1341 aa8.17□□□□□ -1.1
SCN2A-216ENST00000637367 KIF15Q9NS87 1388 aa8.17□□□□□ -1.1
SCN2A-216ENST00000637367 CENPQQ7L2Z9 268 aaPredicted RBP8.17□□□□□ -1.1
SCN2A-216ENST00000637367 KIF3BO15066 747 aa8.16□□□□□ -1.1
SCN2A-216ENST00000637367 CCDC184Q52MB2 194 aa8.16□□□□□ -1.1
SCN2A-216ENST00000637367 SLC4A10Q6U841 1118 aa8.16□□□□□ -1.1
SCN2A-216ENST00000637367 IL27Q8NEV9 243 aa8.16□□□□□ -1.1
SCN2A-216ENST00000637367 KIF7Q2M1P5 1343 aa8.16□□□□□ -1.1
SCN2A-216ENST00000637367 MCCP23508 829 aa8.16□□□□□ -1.1
SCN2A-216ENST00000637367 CALD1Q05682 793 aaKnown RBP8.16□□□□□ -1.1
SCN2A-216ENST00000637367 CDCA7LQ96GN5 454 aa8.16□□□□□ -1.1
SCN2A-216ENST00000637367 CDK11BP21127 795 aaKnown RBP8.16□□□□□ -1.1
SCN2A-216ENST00000637367 CCDC18Q5T9S5 1454 aa8.16□□□□□ -1.1
SCN2A-216ENST00000637367 BICRAQ9NZM4 1560 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms