RNA–Protein interactions for RNA: ENST00000637189.1

CHRNA7-225, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 2

Gene CHRNA7, Length 6,181 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-225ENST00000637189 DCAF11Q8TEB1 546 aa16.09■□□□□ 0.17
CHRNA7-225ENST00000637189 GZF1Q9H116 711 aaPredicted RBP16.08■□□□□ 0.16
CHRNA7-225ENST00000637189 TMF1P82094 1093 aa16.06■□□□□ 0.16
CHRNA7-225ENST00000637189 CCNB3Q8WWL7 1395 aa16.05■□□□□ 0.16
CHRNA7-225ENST00000637189 APPP05067 770 aa16.05■□□□□ 0.16
CHRNA7-225ENST00000637189 SOX12O15370 315 aa16.04■□□□□ 0.16
CHRNA7-225ENST00000637189 ANO8Q9HCE9 1232 aaPredicted RBP16.03■□□□□ 0.16
CHRNA7-225ENST00000637189 MS4A1P11836 297 aa16.03■□□□□ 0.16
CHRNA7-225ENST00000637189 CHMP4BQ9H444 224 aaKnown RBP16.03■□□□□ 0.16
CHRNA7-225ENST00000637189 APBB1O00213 710 aa16.02■□□□□ 0.15
CHRNA7-225ENST00000637189 TSHZ2Q9NRE2 1034 aa16.02■□□□□ 0.15
CHRNA7-225ENST00000637189 GOLGA2Q08379 1002 aa16.01■□□□□ 0.15
CHRNA7-225ENST00000637189 EIF4G1Q04637 1599 aaKnown RBP16.01■□□□□ 0.15
CHRNA7-225ENST00000637189 SAFB2Q14151 953 aaKnown RBP eCLIP16.01■□□□□ 0.15
CHRNA7-225ENST00000637189 ISY1Q9ULR0 285 aaKnown RBP16■□□□□ 0.15
CHRNA7-225ENST00000637189 SRPK2P78362 688 aaKnown RBP15.99■□□□□ 0.15
CHRNA7-225ENST00000637189 HSPA5P11021 654 aaKnown RBP15.99■□□□□ 0.15
CHRNA7-225ENST00000637189 PTMSP20962 102 aa15.98■□□□□ 0.15
CHRNA7-225ENST00000637189 MORC1Q86VD1 984 aa15.98■□□□□ 0.15
CHRNA7-225ENST00000637189 SLKQ9H2G2 1235 aaPredicted RBP15.97■□□□□ 0.15
CHRNA7-225ENST00000637189 PDE4CQ08493 712 aa15.97■□□□□ 0.15
CHRNA7-225ENST00000637189 FOXD1Q16676 465 aa15.96■□□□□ 0.15
CHRNA7-225ENST00000637189 KIAA2012Q0VF49 1180 aa15.95■□□□□ 0.14
CHRNA7-225ENST00000637189 ZNF771Q7L3S4 317 aaPredicted RBP15.95■□□□□ 0.14
CHRNA7-225ENST00000637189 FHAD1B1AJZ9 1412 aa15.95■□□□□ 0.14
CHRNA7-225ENST00000637189 MLECQ14165 292 aa15.95■□□□□ 0.14
CHRNA7-225ENST00000637189 GNL2Q13823 731 aaKnown RBP15.95■□□□□ 0.14
CHRNA7-225ENST00000637189 ERCC6Q03468 1493 aa15.95■□□□□ 0.14
CHRNA7-225ENST00000637189 KANK1Q14678 1352 aa15.94■□□□□ 0.14
CHRNA7-225ENST00000637189 CCER2I3L3R5 266 aa15.94■□□□□ 0.14
CHRNA7-225ENST00000637189 NOC3LQ8WTT2 800 aaKnown RBP15.94■□□□□ 0.14
CHRNA7-225ENST00000637189 SOGA1O94964 1423 aa15.93■□□□□ 0.14
CHRNA7-225ENST00000637189 MCCP23508 829 aa15.93■□□□□ 0.14
CHRNA7-225ENST00000637189 GOLGA6L3A6NEY3 463 aa15.92■□□□□ 0.14
CHRNA7-225ENST00000637189 SETD5Q9C0A6 1442 aa15.92■□□□□ 0.14
CHRNA7-225ENST00000637189 STK26Q9P289 416 aa15.91■□□□□ 0.14
CHRNA7-225ENST00000637189 CARMIL1Q5VZK9 1371 aa15.91■□□□□ 0.14
CHRNA7-225ENST00000637189 SETQ01105 290 aaPredicted RBP15.9■□□□□ 0.14
CHRNA7-225ENST00000637189 PKD2Q13563 968 aa15.89■□□□□ 0.14
CHRNA7-225ENST00000637189 CUX2O14529 1486 aa15.89■□□□□ 0.13
CHRNA7-225ENST00000637189 KTN1Q86UP2 1357 aaKnown RBP15.89■□□□□ 0.13
CHRNA7-225ENST00000637189 GOLGA6L1Q8N7Z2 621 aa15.88■□□□□ 0.13
CHRNA7-225ENST00000637189 ARHGAP35Q9NRY4 1499 aa15.87■□□□□ 0.13
CHRNA7-225ENST00000637189 RTF1Q92541 710 aaKnown RBP15.87■□□□□ 0.13
CHRNA7-225ENST00000637189 KANK4Q5T7N3 995 aaPredicted RBP15.86■□□□□ 0.13
CHRNA7-225ENST00000637189 FOXD4L1Q9NU39 408 aa15.86■□□□□ 0.13
CHRNA7-225ENST00000637189 USP35Q9P2H5 1018 aa15.86■□□□□ 0.13
CHRNA7-225ENST00000637189 GGT6Q6P531 493 aa15.86■□□□□ 0.13
CHRNA7-225ENST00000637189 NACADO15069 1562 aa15.85■□□□□ 0.13
CHRNA7-225ENST00000637189 GBP4Q96PP9 640 aa15.85■□□□□ 0.13
CHRNA7-225ENST00000637189 PRM3Q9NNZ6 103 aa15.84■□□□□ 0.13
CHRNA7-225ENST00000637189 RCAN3Q9UKA8 241 aa15.84■□□□□ 0.13
CHRNA7-225ENST00000637189 ITPRIPQ8IWB1 547 aa15.84■□□□□ 0.13
CHRNA7-225ENST00000637189 ROCK2O75116 1388 aaKnown RBP15.83■□□□□ 0.12
CHRNA7-225ENST00000637189 HSP90B1P14625 803 aaKnown RBP15.83■□□□□ 0.12
CHRNA7-225ENST00000637189 U2AF1L5P0DN76 240 aaPredicted RBP15.82■□□□□ 0.12
CHRNA7-225ENST00000637189 U2AF1Q01081 240 aaKnown RBP eCLIP15.82■□□□□ 0.12
CHRNA7-225ENST00000637189 FAM13BQ9NYF5 915 aa15.82■□□□□ 0.12
CHRNA7-225ENST00000637189 KIAA1211Q6ZU35 1233 aa15.82■□□□□ 0.12
CHRNA7-225ENST00000637189 NOL8Q76FK4 1167 aaKnown RBP15.82■□□□□ 0.12
CHRNA7-225ENST00000637189 HDGFL2Q7Z4V5 671 aaPredicted RBP15.82■□□□□ 0.12
CHRNA7-225ENST00000637189 CREBRFQ8IUR6 639 aa15.82■□□□□ 0.12
CHRNA7-225ENST00000637189 BAZ1AQ9NRL2 1556 aaPredicted RBP15.82■□□□□ 0.12
CHRNA7-225ENST00000637189 HDGFP51858 240 aaKnown RBP15.82■□□□□ 0.12
CHRNA7-225ENST00000637189 PATL2C9JE40 543 aaKnown RBP15.81■□□□□ 0.12
CHRNA7-225ENST00000637189 IPO8O15397 1037 aaKnown RBP15.81■□□□□ 0.12
CHRNA7-225ENST00000637189 MFAP1P55081 439 aaKnown RBP15.81■□□□□ 0.12
CHRNA7-225ENST00000637189 CECR2Q9BXF3 1484 aa15.81■□□□□ 0.12
CHRNA7-225ENST00000637189 VPS8Q8N3P4 1428 aa15.8■□□□□ 0.12
CHRNA7-225ENST00000637189 RAB3GAP2Q9H2M9 1393 aa15.79■□□□□ 0.12
CHRNA7-225ENST00000637189 PAK3O75914 559 aaPredicted RBP15.79■□□□□ 0.12
CHRNA7-225ENST00000637189 MPHOSPH9Q99550 1183 aa15.79■□□□□ 0.12
CHRNA7-225ENST00000637189 ZNF330Q9Y3S2 320 aaPredicted RBP15.79■□□□□ 0.12
CHRNA7-225ENST00000637189 IPO9Q96P70 1041 aaKnown RBP15.79■□□□□ 0.12
CHRNA7-225ENST00000637189 RWDD1Q9H446 243 aaPredicted RBP15.78■□□□□ 0.12
CHRNA7-225ENST00000637189 FOXD4L5Q5VV16 416 aaPredicted RBP15.78■□□□□ 0.12
CHRNA7-225ENST00000637189 FOXD4L4Q8WXT5 416 aaPredicted RBP15.78■□□□□ 0.12
CHRNA7-225ENST00000637189 CFAP44Q96MT7 982 aa15.77■□□□□ 0.12
CHRNA7-225ENST00000637189 RALBP1Q15311 655 aa15.77■□□□□ 0.11
CHRNA7-225ENST00000637189 ABCC8Q09428 1581 aa15.77■□□□□ 0.11
CHRNA7-225ENST00000637189 TRHP20396 242 aaPredicted RBP15.76■□□□□ 0.11
CHRNA7-225ENST00000637189 NUP155O75694 1391 aa15.75■□□□□ 0.11
CHRNA7-225ENST00000637189 TAF7LQ5H9L4 462 aa15.75■□□□□ 0.11
CHRNA7-225ENST00000637189 CCDC146Q8IYE0 955 aa15.74■□□□□ 0.11
CHRNA7-225ENST00000637189 TCERG1O14776 1098 aaKnown RBP15.74■□□□□ 0.11
CHRNA7-225ENST00000637189 SYAP1Q96A49 352 aaPredicted RBP15.73■□□□□ 0.11
CHRNA7-225ENST00000637189 GSE1Q14687 1217 aa15.72■□□□□ 0.11
CHRNA7-225ENST00000637189 CALD1Q05682 793 aaKnown RBP15.72■□□□□ 0.11
CHRNA7-225ENST00000637189 TPM4P67936 248 aa15.72■□□□□ 0.11
CHRNA7-225ENST00000637189 SMC4Q9NTJ3 1288 aa15.71■□□□□ 0.11
CHRNA7-225ENST00000637189 TRIM6-TRIM34B2RNG4 842 aa15.71■□□□□ 0.11
CHRNA7-225ENST00000637189 CSB-PGBD3P0DP91 1061 aa15.71■□□□□ 0.11
CHRNA7-225ENST00000637189 CLUAP1Q96AJ1 413 aa15.71■□□□□ 0.1
CHRNA7-225ENST00000637189 PMFBP1Q8TBY8 1022 aa15.7■□□□□ 0.1
CHRNA7-225ENST00000637189 MAPK8IP2Q13387 824 aaPredicted RBP15.69■□□□□ 0.1
CHRNA7-225ENST00000637189 NUTM2DQ5VT03 806 aaPredicted RBP15.69■□□□□ 0.1
CHRNA7-225ENST00000637189 RASSF8Q8NHQ8 419 aa15.69■□□□□ 0.1
CHRNA7-225ENST00000637189 HTATSF1O43719 755 aaKnown RBP15.69■□□□□ 0.1
CHRNA7-225ENST00000637189 CHMP3Q9Y3E7 222 aa15.68■□□□□ 0.1
CHRNA7-225ENST00000637189 ANKRD30AQ9BXX3 1397 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms