RNA–Protein interactions for RNA: ENST00000636957.1

CHRNA7-222, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 622 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-222ENST00000636957 MTUS2Q5JR59 1369 aa14.23□□□□□ -0.13
CHRNA7-222ENST00000636957 CD109Q6YHK3 1445 aa14.23□□□□□ -0.13
CHRNA7-222ENST00000636957 CFAP74Q9C0B2 1584 aa14.22□□□□□ -0.13
CHRNA7-222ENST00000636957 LRRC9Q6ZRR7 1453 aa14.22□□□□□ -0.13
CHRNA7-222ENST00000636957 TEX14Q8IWB6 1497 aa14.22□□□□□ -0.13
CHRNA7-222ENST00000636957 PREX2Q70Z35 1606 aa14.22□□□□□ -0.13
CHRNA7-222ENST00000636957 CDC42BPBQ9Y5S2 1711 aa14.21□□□□□ -0.13
CHRNA7-222ENST00000636957 ITSN2Q9NZM3 1697 aa14.21□□□□□ -0.13
CHRNA7-222ENST00000636957 PPP4R3CPQ6ZMV5 832 aa14.21□□□□□ -0.13
CHRNA7-222ENST00000636957 ARAP3Q8WWN8 1544 aa14.2□□□□□ -0.14
CHRNA7-222ENST00000636957 APLP2Q06481 763 aa14.2□□□□□ -0.14
CHRNA7-222ENST00000636957 PLCH2O75038 1416 aa14.15□□□□□ -0.14
CHRNA7-222ENST00000636957 KDM6BO15054 1643 aa14.15□□□□□ -0.14
CHRNA7-222ENST00000636957 NCOA2Q15596 1464 aa14.15□□□□□ -0.14
CHRNA7-222ENST00000636957 NEO1Q92859 1461 aa14.15□□□□□ -0.14
CHRNA7-222ENST00000636957 HOXD11P31277 338 aaPredicted RBP14.15□□□□□ -0.14
CHRNA7-222ENST00000636957 RNF39Q9H2S5 420 aa14.15□□□□□ -0.14
CHRNA7-222ENST00000636957 FANCAO15360 1455 aa14.14□□□□□ -0.15
CHRNA7-222ENST00000636957 ARHGAP5Q13017 1502 aa14.14□□□□□ -0.15
CHRNA7-222ENST00000636957 KANK4Q5T7N3 995 aaPredicted RBP14.13□□□□□ -0.15
CHRNA7-222ENST00000636957 GPATCH8Q9UKJ3 1502 aaKnown RBP14.12□□□□□ -0.15
CHRNA7-222ENST00000636957 PHLDB1Q86UU1 1377 aa14.11□□□□□ -0.15
CHRNA7-222ENST00000636957 CCNB3Q8WWL7 1395 aa14.11□□□□□ -0.15
CHRNA7-222ENST00000636957 RICTORQ6R327 1708 aa14.1□□□□□ -0.15
CHRNA7-222ENST00000636957 SAMD9LQ8IVG5 1584 aa14.09□□□□□ -0.15
CHRNA7-222ENST00000636957 AKNAQ7Z591 1439 aa14.08□□□□□ -0.15
CHRNA7-222ENST00000636957 EFCAB2Q5VUJ9 269 aa14.08□□□□□ -0.16
CHRNA7-222ENST00000636957 ABCC1P33527 1531 aa14.08□□□□□ -0.16
CHRNA7-222ENST00000636957 ADGRL1O94910 1474 aa14.07□□□□□ -0.16
CHRNA7-222ENST00000636957 MYOM3Q5VTT5 1437 aa14.06□□□□□ -0.16
CHRNA7-222ENST00000636957 COL17A1Q9UMD9 1497 aaPredicted RBP14.06□□□□□ -0.16
CHRNA7-222ENST00000636957 FRMPD1Q5SYB0 1578 aa14.05□□□□□ -0.16
CHRNA7-222ENST00000636957 CNKSR2Q8WXI2 1034 aa14.05□□□□□ -0.16
CHRNA7-222ENST00000636957 CFDP1Q9UEE9 299 aaPredicted RBP14.04□□□□□ -0.16
CHRNA7-222ENST00000636957 PLEKHH2Q8IVE3 1493 aa14.04□□□□□ -0.16
CHRNA7-222ENST00000636957 DENND4BO75064 1496 aaPredicted RBP14.03□□□□□ -0.16
CHRNA7-222ENST00000636957 SYCP2Q9BX26 1530 aa14.03□□□□□ -0.16
CHRNA7-222ENST00000636957 PTPN23Q9H3S7 1636 aa14.02□□□□□ -0.16
CHRNA7-222ENST00000636957 MIA2Q96PC5 1412 aa14.02□□□□□ -0.16
CHRNA7-222ENST00000636957 ZMYM4Q5VZL5 1548 aa14.01□□□□□ -0.17
CHRNA7-222ENST00000636957 CAMSAP2Q08AD1 1489 aa14.01□□□□□ -0.17
CHRNA7-222ENST00000636957 POGZQ7Z3K3 1410 aa14.01□□□□□ -0.17
CHRNA7-222ENST00000636957 SCAPERQ9BY12 1400 aa14.01□□□□□ -0.17
CHRNA7-222ENST00000636957 KDM5CP41229 1560 aa14□□□□□ -0.17
CHRNA7-222ENST00000636957 ZNF518AQ6AHZ1 1483 aa14□□□□□ -0.17
CHRNA7-222ENST00000636957 ARHGEF12Q9NZN5 1544 aa14□□□□□ -0.17
CHRNA7-222ENST00000636957 FGD6Q6ZV73 1430 aa13.99□□□□□ -0.17
CHRNA7-222ENST00000636957 KIAA1107Q9UPP5 1409 aa13.99□□□□□ -0.17
CHRNA7-222ENST00000636957 RNF216Q9NWF9 866 aaPredicted RBP13.99□□□□□ -0.17
CHRNA7-222ENST00000636957 ZNF777Q9ULD5 760 aaPredicted RBP13.99□□□□□ -0.17
CHRNA7-222ENST00000636957 ARHGEF5Q12774 1597 aa13.99□□□□□ -0.17
CHRNA7-222ENST00000636957 HECW2Q9P2P5 1572 aa13.98□□□□□ -0.17
CHRNA7-222ENST00000636957 CROCC2H7BZ55 1655 aa13.98□□□□□ -0.17
CHRNA7-222ENST00000636957 C1QBPQ07021 282 aaKnown RBP13.97□□□□□ -0.17
CHRNA7-222ENST00000636957 ARHGEF40Q8TER5 1519 aa13.96□□□□□ -0.17
CHRNA7-222ENST00000636957 TCOF1Q13428 1488 aaKnown RBP13.96□□□□□ -0.17
CHRNA7-222ENST00000636957 RAPGEF3O95398 923 aa13.96□□□□□ -0.17
CHRNA7-222ENST00000636957 PPARGC1BQ86YN6 1023 aaKnown RBP13.96□□□□□ -0.17
CHRNA7-222ENST00000636957 ZNF644Q9H582 1327 aaPredicted RBP13.95□□□□□ -0.18
CHRNA7-222ENST00000636957 MAGI2Q86UL8 1455 aa13.95□□□□□ -0.18
CHRNA7-222ENST00000636957 MBD5Q9P267 1494 aa13.95□□□□□ -0.18
CHRNA7-222ENST00000636957 KIDINS220Q9ULH0 1771 aa13.95□□□□□ -0.18
CHRNA7-222ENST00000636957 TRAPPC8Q9Y2L5 1435 aa13.95□□□□□ -0.18
CHRNA7-222ENST00000636957 INO80Q9ULG1 1556 aaPredicted RBP13.95□□□□□ -0.18
CHRNA7-222ENST00000636957 CCDC141Q6ZP82 1450 aa13.94□□□□□ -0.18
CHRNA7-222ENST00000636957 DNMT1P26358 1616 aaKnown RBP13.94□□□□□ -0.18
CHRNA7-222ENST00000636957 ZFYVE16Q7Z3T8 1539 aa13.94□□□□□ -0.18
CHRNA7-222ENST00000636957 MLH3Q9UHC1 1453 aa13.93□□□□□ -0.18
CHRNA7-222ENST00000636957 HNRNPMP52272 730 aaKnown RBP eCLIP13.92□□□□□ -0.18
CHRNA7-222ENST00000636957 ABCA6Q8N139 1617 aa13.92□□□□□ -0.18
CHRNA7-222ENST00000636957 ATP7AQ04656 1500 aa13.91□□□□□ -0.18
CHRNA7-222ENST00000636957 DIP2CQ9Y2E4 1556 aa13.91□□□□□ -0.18
CHRNA7-222ENST00000636957 MAST1Q9Y2H9 1570 aa13.91□□□□□ -0.18
CHRNA7-222ENST00000636957 ADGBQ8N7X0 1667 aa13.91□□□□□ -0.18
CHRNA7-222ENST00000636957 AFAP1Q8N556 730 aa13.9□□□□□ -0.18
CHRNA7-222ENST00000636957 RSPH4AQ5TD94 716 aa13.89□□□□□ -0.19
CHRNA7-222ENST00000636957 RRBP1Q9P2E9 1410 aaKnown RBP13.89□□□□□ -0.19
CHRNA7-222ENST00000636957 SHANK2Q9UPX8 1470 aa13.88□□□□□ -0.19
CHRNA7-222ENST00000636957 YEATS2Q9ULM3 1422 aa13.88□□□□□ -0.19
CHRNA7-222ENST00000636957 PLXNC1O60486 1568 aa13.88□□□□□ -0.19
CHRNA7-222ENST00000636957 REREQ9P2R6 1566 aa13.88□□□□□ -0.19
CHRNA7-222ENST00000636957 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.87□□□□□ -0.19
CHRNA7-222ENST00000636957 RTEL1-TNFRSF6BF6WH68 1400 aa13.87□□□□□ -0.19
CHRNA7-222ENST00000636957 DAPK1P53355 1430 aa13.87□□□□□ -0.19
CHRNA7-222ENST00000636957 SPAG9O60271 1321 aaKnown RBP13.87□□□□□ -0.19
CHRNA7-222ENST00000636957 SIGLEC1Q9BZZ2 1709 aa13.86□□□□□ -0.19
CHRNA7-222ENST00000636957 ABCC5O15440 1437 aa13.85□□□□□ -0.19
CHRNA7-222ENST00000636957 FAM50AQ14320 339 aaKnown RBP13.85□□□□□ -0.19
CHRNA7-222ENST00000636957 ATP10AO60312 1499 aa13.85□□□□□ -0.19
CHRNA7-222ENST00000636957 C9orf84Q5VXU9 1444 aa13.84□□□□□ -0.19
CHRNA7-222ENST00000636957 TSPY4P0CV99 314 aa13.83□□□□□ -0.2
CHRNA7-222ENST00000636957 TSPY10P0CW01 314 aa13.83□□□□□ -0.2
CHRNA7-222ENST00000636957 MYT1LQ9UL68 1186 aa13.83□□□□□ -0.2
CHRNA7-222ENST00000636957 BCORL1Q5H9F3 1711 aa13.81□□□□□ -0.2
CHRNA7-222ENST00000636957 ADGRL2O95490 1459 aa13.8□□□□□ -0.2
CHRNA7-222ENST00000636957 AGLP35573 1532 aa13.8□□□□□ -0.2
CHRNA7-222ENST00000636957 EIF2AK4Q9P2K8 1649 aaKnown RBP13.79□□□□□ -0.2
CHRNA7-222ENST00000636957 A2MP01023 1474 aa13.79□□□□□ -0.2
CHRNA7-222ENST00000636957 DUOX2Q9NRD8 1548 aa13.78□□□□□ -0.2
CHRNA7-222ENST00000636957 FER1L4A9Z1Z3 1794 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms