RNA–Protein interactions for RNA: ENST00000636709.1

CHRNA7-219, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 7,722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-219ENST00000636709 PNNQ9H307 717 aaKnown RBP11.39□□□□□ -0.59
CHRNA7-219ENST00000636709 FRAT2O75474 233 aaPredicted RBP11.39□□□□□ -0.59
CHRNA7-219ENST00000636709 MORC1Q86VD1 984 aa11.38□□□□□ -0.59
CHRNA7-219ENST00000636709 WWC1Q8IX03 1113 aa11.36□□□□□ -0.59
CHRNA7-219ENST00000636709 FBXO3Q9UK99 471 aa11.36□□□□□ -0.59
CHRNA7-219ENST00000636709 EVA1CP58658 441 aa11.36□□□□□ -0.59
CHRNA7-219ENST00000636709 DRC7Q8IY82 874 aa11.36□□□□□ -0.59
CHRNA7-219ENST00000636709 RAD21O60216 631 aa11.35□□□□□ -0.59
CHRNA7-219ENST00000636709 RB1CC1Q8TDY2 1594 aa11.35□□□□□ -0.59
CHRNA7-219ENST00000636709 HDGFL2Q7Z4V5 671 aaPredicted RBP11.35□□□□□ -0.59
CHRNA7-219ENST00000636709 MIER1Q8N108 512 aa11.35□□□□□ -0.59
CHRNA7-219ENST00000636709 CCNB3Q8WWL7 1395 aa11.34□□□□□ -0.59
CHRNA7-219ENST00000636709 FBXW7Q969H0 707 aa11.34□□□□□ -0.59
CHRNA7-219ENST00000636709 CREBRFQ8IUR6 639 aa11.34□□□□□ -0.59
CHRNA7-219ENST00000636709 BAZ1BQ9UIG0 1483 aaKnown RBP11.34□□□□□ -0.59
CHRNA7-219ENST00000636709 NOC3LQ8WTT2 800 aaKnown RBP11.33□□□□□ -0.6
CHRNA7-219ENST00000636709 EID1Q9Y6B2 187 aa11.33□□□□□ -0.6
CHRNA7-219ENST00000636709 NGDNQ8NEJ9 315 aaKnown RBP11.33□□□□□ -0.6
CHRNA7-219ENST00000636709 TMF1P82094 1093 aa11.32□□□□□ -0.6
CHRNA7-219ENST00000636709 SUPT16HQ9Y5B9 1047 aaKnown RBP11.32□□□□□ -0.6
CHRNA7-219ENST00000636709 HSP90B1P14625 803 aaKnown RBP11.32□□□□□ -0.6
CHRNA7-219ENST00000636709 KIAA2012Q0VF49 1180 aa11.32□□□□□ -0.6
CHRNA7-219ENST00000636709 SYTL4Q96C24 671 aaPredicted RBP11.32□□□□□ -0.6
CHRNA7-219ENST00000636709 DCAF8L1A6NGE4 600 aa11.31□□□□□ -0.6
CHRNA7-219ENST00000636709 MCCP23508 829 aa11.31□□□□□ -0.6
CHRNA7-219ENST00000636709 TOMM22Q9NS69 142 aa11.31□□□□□ -0.6
CHRNA7-219ENST00000636709 CNKSR2Q8WXI2 1034 aa11.31□□□□□ -0.6
CHRNA7-219ENST00000636709 SIN3AQ96ST3 1273 aa11.3□□□□□ -0.6
CHRNA7-219ENST00000636709 B4GALNT3Q6L9W6 998 aa11.3□□□□□ -0.6
CHRNA7-219ENST00000636709 KIAA1211Q6ZU35 1233 aa11.3□□□□□ -0.6
CHRNA7-219ENST00000636709 RASSF8Q8NHQ8 419 aa11.29□□□□□ -0.6
CHRNA7-219ENST00000636709 CWC22Q9HCG8 908 aaKnown RBP11.29□□□□□ -0.6
CHRNA7-219ENST00000636709 CHMP4BQ9H444 224 aaKnown RBP11.29□□□□□ -0.6
CHRNA7-219ENST00000636709 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.29□□□□□ -0.6
CHRNA7-219ENST00000636709 FOXD1Q16676 465 aa11.28□□□□□ -0.6
CHRNA7-219ENST00000636709 NGEFQ8N5V2 710 aa11.28□□□□□ -0.6
CHRNA7-219ENST00000636709 SAMD1Q6SPF0 538 aaPredicted RBP11.28□□□□□ -0.6
CHRNA7-219ENST00000636709 NRDCO43847 1150 aa11.27□□□□□ -0.6
CHRNA7-219ENST00000636709 SLC4A10Q6U841 1118 aa11.27□□□□□ -0.6
CHRNA7-219ENST00000636709 MARCH6O60337 910 aa11.27□□□□□ -0.6
CHRNA7-219ENST00000636709 PPP1R1BQ9UD71 204 aaPredicted RBP11.27□□□□□ -0.6
CHRNA7-219ENST00000636709 AMPHP49418 695 aa11.27□□□□□ -0.61
CHRNA7-219ENST00000636709 NAP1L5Q96NT1 182 aaPredicted RBP11.26□□□□□ -0.61
CHRNA7-219ENST00000636709 U2AF1L5P0DN76 240 aaPredicted RBP11.25□□□□□ -0.61
CHRNA7-219ENST00000636709 U2AF1Q01081 240 aaKnown RBP eCLIP11.25□□□□□ -0.61
CHRNA7-219ENST00000636709 ANP32EQ9BTT0 268 aa11.25□□□□□ -0.61
CHRNA7-219ENST00000636709 HSCBQ8IWL3 235 aa11.25□□□□□ -0.61
CHRNA7-219ENST00000636709 TRIM34Q9BYJ4 488 aa11.25□□□□□ -0.61
CHRNA7-219ENST00000636709 RTN4Q9NQC3 1192 aaKnown RBP11.25□□□□□ -0.61
CHRNA7-219ENST00000636709 CTDP1Q9Y5B0 961 aaPredicted RBP11.25□□□□□ -0.61
CHRNA7-219ENST00000636709 TRIM6-TRIM34B2RNG4 842 aa11.25□□□□□ -0.61
CHRNA7-219ENST00000636709 MS4A1P11836 297 aa11.24□□□□□ -0.61
CHRNA7-219ENST00000636709 ITPRIPQ8IWB1 547 aa11.24□□□□□ -0.61
CHRNA7-219ENST00000636709 SPAG9O60271 1321 aaKnown RBP11.24□□□□□ -0.61
CHRNA7-219ENST00000636709 CHAF1AQ13111 956 aaPredicted RBP11.24□□□□□ -0.61
CHRNA7-219ENST00000636709 CYB5RLQ6IPT4 315 aa11.24□□□□□ -0.61
CHRNA7-219ENST00000636709 NOL8Q76FK4 1167 aaKnown RBP11.23□□□□□ -0.61
CHRNA7-219ENST00000636709 KIF27Q86VH2 1401 aa11.23□□□□□ -0.61
CHRNA7-219ENST00000636709 TCEAL9Q9UHQ7 104 aa11.23□□□□□ -0.61
CHRNA7-219ENST00000636709 GOLGA3Q08378 1498 aa11.22□□□□□ -0.61
CHRNA7-219ENST00000636709 STK31Q9BXU1 1019 aa11.22□□□□□ -0.61
CHRNA7-219ENST00000636709 KIF3BO15066 747 aa11.21□□□□□ -0.61
CHRNA7-219ENST00000636709 A0A0U1RQG5 324 aaPredicted RBP11.21□□□□□ -0.62
CHRNA7-219ENST00000636709 L1TD1Q5T7N2 865 aaKnown RBP11.21□□□□□ -0.62
CHRNA7-219ENST00000636709 WASHC2CQ9Y4E1 1318 aa11.2□□□□□ -0.62
CHRNA7-219ENST00000636709 GPATCH3Q96I76 525 aa11.2□□□□□ -0.62
CHRNA7-219ENST00000636709 ARID3AQ99856 593 aa11.18□□□□□ -0.62
CHRNA7-219ENST00000636709 PES1O00541 588 aaKnown RBP11.18□□□□□ -0.62
CHRNA7-219ENST00000636709 ROCK2O75116 1388 aaKnown RBP11.17□□□□□ -0.62
CHRNA7-219ENST00000636709 CEP162Q5TB80 1403 aa11.17□□□□□ -0.62
CHRNA7-219ENST00000636709 PKD2Q13563 968 aa11.17□□□□□ -0.62
CHRNA7-219ENST00000636709 WRNQ14191 1432 aaPredicted RBP eCLIP11.16□□□□□ -0.62
CHRNA7-219ENST00000636709 CCDC146Q8IYE0 955 aa11.16□□□□□ -0.62
CHRNA7-219ENST00000636709 HNRNPMP52272 730 aaKnown RBP eCLIP11.16□□□□□ -0.62
CHRNA7-219ENST00000636709 C1orf141Q5JVX7 400 aa11.16□□□□□ -0.62
CHRNA7-219ENST00000636709 CEP89Q96ST8 783 aa11.15□□□□□ -0.62
CHRNA7-219ENST00000636709 IPO8O15397 1037 aaKnown RBP11.15□□□□□ -0.63
CHRNA7-219ENST00000636709 VPS37DQ86XT2 251 aa11.14□□□□□ -0.63
CHRNA7-219ENST00000636709 NECTIN2Q92692 538 aa11.14□□□□□ -0.63
CHRNA7-219ENST00000636709 NOL10Q9BSC4 688 aaKnown RBP11.14□□□□□ -0.63
CHRNA7-219ENST00000636709 FOXD4L1Q9NU39 408 aa11.14□□□□□ -0.63
CHRNA7-219ENST00000636709 CUX2O14529 1486 aa11.14□□□□□ -0.63
CHRNA7-219ENST00000636709 FOXD4L5Q5VV16 416 aaPredicted RBP11.13□□□□□ -0.63
CHRNA7-219ENST00000636709 FOXD4L4Q8WXT5 416 aaPredicted RBP11.13□□□□□ -0.63
CHRNA7-219ENST00000636709 DHX16O60231 1041 aaKnown RBP11.13□□□□□ -0.63
CHRNA7-219ENST00000636709 CALD1Q05682 793 aaKnown RBP11.13□□□□□ -0.63
CHRNA7-219ENST00000636709 TRAK1Q9UPV9 953 aa11.13□□□□□ -0.63
CHRNA7-219ENST00000636709 CARMIL2Q6F5E8 1435 aa11.12□□□□□ -0.63
CHRNA7-219ENST00000636709 SMC4Q9NTJ3 1288 aa11.12□□□□□ -0.63
CHRNA7-219ENST00000636709 PSME1Q06323 249 aa11.12□□□□□ -0.63
CHRNA7-219ENST00000636709 MSNP26038 577 aaKnown RBP11.11□□□□□ -0.63
CHRNA7-219ENST00000636709 GZF1Q9H116 711 aaPredicted RBP11.11□□□□□ -0.63
CHRNA7-219ENST00000636709 EIF2S2P20042 333 aaKnown RBP11.11□□□□□ -0.63
CHRNA7-219ENST00000636709 USP35Q9P2H5 1018 aa11.11□□□□□ -0.63
CHRNA7-219ENST00000636709 EFCAB2Q5VUJ9 269 aa11.11□□□□□ -0.63
CHRNA7-219ENST00000636709 TTC5Q8N0Z6 440 aa11.11□□□□□ -0.63
CHRNA7-219ENST00000636709 TERF2IPQ9NYB0 399 aa11.11□□□□□ -0.63
CHRNA7-219ENST00000636709 CLUAP1Q96AJ1 413 aa11.1□□□□□ -0.63
CHRNA7-219ENST00000636709 KTN1Q86UP2 1357 aaKnown RBP11.1□□□□□ -0.63
CHRNA7-219ENST00000636709 AMOTL1Q8IY63 956 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms