RNA–Protein interactions for RNA: ENST00000636443.1

SYNGAP1-215, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 79 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-215ENST00000636443 CPS1P31327 1500 aa3.31□□□□□ -1.88
SYNGAP1-215ENST00000636443 ZFYVE16Q7Z3T8 1539 aa3.31□□□□□ -1.88
SYNGAP1-215ENST00000636443 PPP6R1Q9UPN7 881 aa3.31□□□□□ -1.88
SYNGAP1-215ENST00000636443 SETD1BQ9UPS6 1966 aaKnown RBP3.31□□□□□ -1.88
SYNGAP1-215ENST00000636443 SIGLEC1Q9BZZ2 1709 aa3.3□□□□□ -1.88
SYNGAP1-215ENST00000636443 EFCAB5A4FU69 1503 aa3.3□□□□□ -1.88
SYNGAP1-215ENST00000636443 SRCAPQ6ZRS2 3230 aa3.3□□□□□ -1.88
SYNGAP1-215ENST00000636443 NUTM2BA6NNL0 878 aaPredicted RBP3.3□□□□□ -1.88
SYNGAP1-215ENST00000636443 NUTM2EB1AL46 878 aaPredicted RBP3.3□□□□□ -1.88
SYNGAP1-215ENST00000636443 CAPN15O75808 1086 aa3.3□□□□□ -1.88
SYNGAP1-215ENST00000636443 NUTM2DQ5VT03 806 aaPredicted RBP3.3□□□□□ -1.88
SYNGAP1-215ENST00000636443 NUTM2AQ8IVF1 878 aaPredicted RBP3.3□□□□□ -1.88
SYNGAP1-215ENST00000636443 EHMT2Q96KQ7 1210 aa3.3□□□□□ -1.88
SYNGAP1-215ENST00000636443 C3P01024 1663 aa3.3□□□□□ -1.88
SYNGAP1-215ENST00000636443 LRRC7Q96NW7 1537 aa3.29□□□□□ -1.88
SYNGAP1-215ENST00000636443 PHLDB1Q86UU1 1377 aa3.29□□□□□ -1.88
SYNGAP1-215ENST00000636443 RXRBP28702 533 aa3.29□□□□□ -1.88
SYNGAP1-215ENST00000636443 RNF17Q9BXT8 1623 aaKnown RBP3.29□□□□□ -1.88
SYNGAP1-215ENST00000636443 ARHGEF12Q9NZN5 1544 aa3.29□□□□□ -1.88
SYNGAP1-215ENST00000636443 WRNQ14191 1432 aaPredicted RBP eCLIP3.28□□□□□ -1.88
SYNGAP1-215ENST00000636443 RICTORQ6R327 1708 aa3.28□□□□□ -1.88
SYNGAP1-215ENST00000636443 DCAF8L1A6NGE4 600 aa3.28□□□□□ -1.88
SYNGAP1-215ENST00000636443 SLC34A2O95436 690 aa3.28□□□□□ -1.88
SYNGAP1-215ENST00000636443 PKD2Q13563 968 aa3.28□□□□□ -1.88
SYNGAP1-215ENST00000636443 ZNF772Q68DY9 489 aaPredicted RBP3.28□□□□□ -1.88
SYNGAP1-215ENST00000636443 LRP5O75197 1615 aa3.28□□□□□ -1.88
SYNGAP1-215ENST00000636443 DENND4BO75064 1496 aaPredicted RBP3.28□□□□□ -1.88
SYNGAP1-215ENST00000636443 NEO1Q92859 1461 aa3.28□□□□□ -1.88
SYNGAP1-215ENST00000636443 ARID3CA6NKF2 412 aa3.27□□□□□ -1.89
SYNGAP1-215ENST00000636443 MYT1LQ9UL68 1186 aa3.27□□□□□ -1.89
SYNGAP1-215ENST00000636443 SHANK2Q9UPX8 1470 aa3.27□□□□□ -1.89
SYNGAP1-215ENST00000636443 TRAPPC8Q9Y2L5 1435 aa3.27□□□□□ -1.89
SYNGAP1-215ENST00000636443 ALKQ9UM73 1620 aa3.26□□□□□ -1.89
SYNGAP1-215ENST00000636443 PCDH10Q9P2E7 1040 aa3.26□□□□□ -1.89
SYNGAP1-215ENST00000636443 ATAD2Q6PL18 1390 aa3.25□□□□□ -1.89
SYNGAP1-215ENST00000636443 IQGAP2Q13576 1575 aa3.25□□□□□ -1.89
SYNGAP1-215ENST00000636443 CFAP74Q9C0B2 1584 aa3.25□□□□□ -1.89
SYNGAP1-215ENST00000636443 POLR1AO95602 1720 aaPredicted RBP3.25□□□□□ -1.89
SYNGAP1-215ENST00000636443 ABCA9Q8IUA7 1624 aa3.25□□□□□ -1.89
SYNGAP1-215ENST00000636443 C9orf84Q5VXU9 1444 aa3.25□□□□□ -1.89
SYNGAP1-215ENST00000636443 ZMYM4Q5VZL5 1548 aa3.24□□□□□ -1.89
SYNGAP1-215ENST00000636443 ZNF142P52746 1687 aaPredicted RBP3.24□□□□□ -1.89
SYNGAP1-215ENST00000636443 PLA2R1Q13018 1463 aa3.24□□□□□ -1.89
SYNGAP1-215ENST00000636443 HECW1Q76N89 1606 aa3.24□□□□□ -1.89
SYNGAP1-215ENST00000636443 MYO3AQ8NEV4 1616 aa3.24□□□□□ -1.89
SYNGAP1-215ENST00000636443 C1QTNF8P60827 252 aa3.24□□□□□ -1.89
SYNGAP1-215ENST00000636443 ABCA8O94911 1581 aa3.24□□□□□ -1.89
SYNGAP1-215ENST00000636443 PHLPP1O60346 1717 aa3.24□□□□□ -1.89
SYNGAP1-215ENST00000636443 ATP10AO60312 1499 aa3.23□□□□□ -1.89
SYNGAP1-215ENST00000636443 MAGI2Q86UL8 1455 aa3.23□□□□□ -1.89
SYNGAP1-215ENST00000636443 CDK12Q9NYV4 1490 aaPredicted RBP3.23□□□□□ -1.89
SYNGAP1-215ENST00000636443 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.23□□□□□ -1.89
SYNGAP1-215ENST00000636443 RGS12O14924 1447 aa3.23□□□□□ -1.89
SYNGAP1-215ENST00000636443 SYNMO15061 1565 aa3.23□□□□□ -1.89
SYNGAP1-215ENST00000636443 HNRNPUL2Q1KMD3 747 aaKnown RBP3.23□□□□□ -1.89
SYNGAP1-215ENST00000636443 CEP170BQ9Y4F5 1589 aaPredicted RBP3.23□□□□□ -1.89
SYNGAP1-215ENST00000636443 TCOF1Q13428 1488 aaKnown RBP3.22□□□□□ -1.89
SYNGAP1-215ENST00000636443 RAPGEF2Q9Y4G8 1499 aa3.22□□□□□ -1.89
SYNGAP1-215ENST00000636443 KDM5CP41229 1560 aa3.22□□□□□ -1.89
SYNGAP1-215ENST00000636443 FHOD3Q2V2M9 1422 aa3.22□□□□□ -1.89
SYNGAP1-215ENST00000636443 PSDA5PKW4 1024 aaPredicted RBP3.22□□□□□ -1.89
SYNGAP1-215ENST00000636443 FAM9AQ8IZU1 332 aaPredicted RBP3.22□□□□□ -1.89
SYNGAP1-215ENST00000636443 ROBO1Q9Y6N7 1651 aa3.22□□□□□ -1.89
SYNGAP1-215ENST00000636443 CDK13Q14004 1512 aaKnown RBP3.22□□□□□ -1.89
SYNGAP1-215ENST00000636443 DISP1Q96F81 1524 aa3.22□□□□□ -1.89
SYNGAP1-215ENST00000636443 JCADQ9P266 1359 aa3.22□□□□□ -1.89
SYNGAP1-215ENST00000636443 VWDEQ8N2E2 1590 aa3.21□□□□□ -1.89
SYNGAP1-215ENST00000636443 SF3B2Q13435 895 aaKnown RBP3.21□□□□□ -1.9
SYNGAP1-215ENST00000636443 ZNF784Q8NCA9 323 aaPredicted RBP3.21□□□□□ -1.9
SYNGAP1-215ENST00000636443 NHSL1Q5SYE7 1610 aa3.21□□□□□ -1.9
SYNGAP1-215ENST00000636443 NPATQ14207 1427 aa3.2□□□□□ -1.9
SYNGAP1-215ENST00000636443 CNTLNQ9NXG0 1405 aa3.2□□□□□ -1.9
SYNGAP1-215ENST00000636443 LRP6O75581 1613 aa3.2□□□□□ -1.9
SYNGAP1-215ENST00000636443 BIVM-ERCC5R4GMW8 1640 aa3.2□□□□□ -1.9
SYNGAP1-215ENST00000636443 NEURL4Q96JN8 1562 aa3.2□□□□□ -1.9
SYNGAP1-215ENST00000636443 AFF2P51816 1311 aa3.19□□□□□ -1.9
SYNGAP1-215ENST00000636443 GIGYF1O75420 1035 aaPredicted RBP3.19□□□□□ -1.9
SYNGAP1-215ENST00000636443 RBM6P78332 1123 aaKnown RBP3.19□□□□□ -1.9
SYNGAP1-215ENST00000636443 CCDC125Q86Z20 511 aa3.19□□□□□ -1.9
SYNGAP1-215ENST00000636443 NGLY1Q96IV0 654 aa3.19□□□□□ -1.9
SYNGAP1-215ENST00000636443 PPP1R1BQ9UD71 204 aaPredicted RBP3.19□□□□□ -1.9
SYNGAP1-215ENST00000636443 MROH2AA6NES4 1674 aa3.19□□□□□ -1.9
SYNGAP1-215ENST00000636443 IQGAP1P46940 1657 aa3.19□□□□□ -1.9
SYNGAP1-215ENST00000636443 STRCP1A6NGW2 1772 aa3.19□□□□□ -1.9
SYNGAP1-215ENST00000636443 FAM135BQ49AJ0 1406 aa3.19□□□□□ -1.9
SYNGAP1-215ENST00000636443 SPATA31A6Q5VVP1 1343 aa3.19□□□□□ -1.9
SYNGAP1-215ENST00000636443 CLTCQ00610 1675 aaKnown RBP3.18□□□□□ -1.9
SYNGAP1-215ENST00000636443 ITSN2Q9NZM3 1697 aa3.18□□□□□ -1.9
SYNGAP1-215ENST00000636443 HRCP23327 699 aa3.18□□□□□ -1.9
SYNGAP1-215ENST00000636443 ANKLE2Q86XL3 938 aa3.18□□□□□ -1.9
SYNGAP1-215ENST00000636443 C8orf37Q96NL8 207 aa3.18□□□□□ -1.9
SYNGAP1-215ENST00000636443 QTRT2Q9H974 415 aaKnown RBP3.18□□□□□ -1.9
SYNGAP1-215ENST00000636443 DNMT1P26358 1616 aaKnown RBP3.18□□□□□ -1.9
SYNGAP1-215ENST00000636443 NPHP4O75161 1426 aaPredicted RBP3.18□□□□□ -1.9
SYNGAP1-215ENST00000636443 SCAPERQ9BY12 1400 aa3.18□□□□□ -1.9
SYNGAP1-215ENST00000636443 NWD1Q149M9 1564 aa3.17□□□□□ -1.9
SYNGAP1-215ENST00000636443 LRRC9Q6ZRR7 1453 aa3.17□□□□□ -1.9
SYNGAP1-215ENST00000636443 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.17□□□□□ -1.9
SYNGAP1-215ENST00000636443 PRELPP51888 382 aa3.17□□□□□ -1.9
SYNGAP1-215ENST00000636443 DEFB132Q7Z7B7 95 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms