RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 DAPK1P53355 1430 aa6.25□□□□□ -1.41
SCN1A-210ENST00000635776 MYT1LQ9UL68 1186 aa6.25□□□□□ -1.41
SCN1A-210ENST00000635776 KIAA0556O60303 1618 aa6.25□□□□□ -1.41
SCN1A-210ENST00000635776 ZNF608Q9ULD9 1512 aaPredicted RBP6.25□□□□□ -1.41
SCN1A-210ENST00000635776 PTPN23Q9H3S7 1636 aa6.25□□□□□ -1.41
SCN1A-210ENST00000635776 CDCA8Q53HL2 280 aa6.24□□□□□ -1.41
SCN1A-210ENST00000635776 PRG4Q92954 1404 aaPredicted RBP6.24□□□□□ -1.41
SCN1A-210ENST00000635776 ARHGEF11O15085 1522 aa6.23□□□□□ -1.41
SCN1A-210ENST00000635776 ANKRD50Q9ULJ7 1429 aa6.23□□□□□ -1.41
SCN1A-210ENST00000635776 NUP155O75694 1391 aa6.23□□□□□ -1.41
SCN1A-210ENST00000635776 RAPGEF6Q8TEU7 1601 aa6.23□□□□□ -1.41
SCN1A-210ENST00000635776 ERICH6BQ5W0A0 696 aa6.23□□□□□ -1.41
SCN1A-210ENST00000635776 KANK1Q14678 1352 aa6.22□□□□□ -1.41
SCN1A-210ENST00000635776 PBRM1Q86U86 1689 aa6.22□□□□□ -1.41
SCN1A-210ENST00000635776 EIF4G3O43432 1585 aaKnown RBP6.22□□□□□ -1.41
SCN1A-210ENST00000635776 NUP153P49790 1475 aaKnown RBP6.22□□□□□ -1.41
SCN1A-210ENST00000635776 DISP1Q96F81 1524 aa6.22□□□□□ -1.41
SCN1A-210ENST00000635776 DNAJC5BQ9UF47 199 aa6.22□□□□□ -1.41
SCN1A-210ENST00000635776 SHANK2Q9UPX8 1470 aa6.22□□□□□ -1.41
SCN1A-210ENST00000635776 MAPKBP1O60336 1514 aa6.22□□□□□ -1.41
SCN1A-210ENST00000635776 PKD2Q13563 968 aa6.22□□□□□ -1.41
SCN1A-210ENST00000635776 L3MBTL2Q969R5 705 aa6.21□□□□□ -1.41
SCN1A-210ENST00000635776 ABCC5O15440 1437 aa6.21□□□□□ -1.42
SCN1A-210ENST00000635776 KIAA1107Q9UPP5 1409 aa6.21□□□□□ -1.42
SCN1A-210ENST00000635776 CDK13Q14004 1512 aaKnown RBP6.21□□□□□ -1.42
SCN1A-210ENST00000635776 HSPA5P11021 654 aaKnown RBP6.2□□□□□ -1.42
SCN1A-210ENST00000635776 ZNF326Q5BKZ1 582 aaKnown RBP6.2□□□□□ -1.42
SCN1A-210ENST00000635776 KTN1Q86UP2 1357 aaKnown RBP6.2□□□□□ -1.42
SCN1A-210ENST00000635776 KIF14Q15058 1648 aa6.2□□□□□ -1.42
SCN1A-210ENST00000635776 ADGRL2O95490 1459 aa6.2□□□□□ -1.42
SCN1A-210ENST00000635776 NCOA1Q15788 1441 aa6.19□□□□□ -1.42
SCN1A-210ENST00000635776 CARD11Q9BXL7 1154 aa6.19□□□□□ -1.42
SCN1A-210ENST00000635776 ITSN2Q9NZM3 1697 aa6.19□□□□□ -1.42
SCN1A-210ENST00000635776 CAMSAP2Q08AD1 1489 aa6.19□□□□□ -1.42
SCN1A-210ENST00000635776 KIF15Q9NS87 1388 aa6.19□□□□□ -1.42
SCN1A-210ENST00000635776 GPATCH8Q9UKJ3 1502 aaKnown RBP6.19□□□□□ -1.42
SCN1A-210ENST00000635776 C9orf84Q5VXU9 1444 aa6.19□□□□□ -1.42
SCN1A-210ENST00000635776 CCDC141Q6ZP82 1450 aa6.18□□□□□ -1.42
SCN1A-210ENST00000635776 ANKRD30BQ9BXX2 1392 aa6.18□□□□□ -1.42
SCN1A-210ENST00000635776 RPRD2Q5VT52 1461 aaKnown RBP6.18□□□□□ -1.42
SCN1A-210ENST00000635776 PLB1Q6P1J6 1458 aa6.18□□□□□ -1.42
SCN1A-210ENST00000635776 CCDC144AA2RUR9 1427 aa6.18□□□□□ -1.42
SCN1A-210ENST00000635776 KCNH8Q96L42 1107 aa6.18□□□□□ -1.42
SCN1A-210ENST00000635776 POLR3GLQ9BT43 218 aa6.18□□□□□ -1.42
SCN1A-210ENST00000635776 MRS2Q9HD23 443 aa6.17□□□□□ -1.42
SCN1A-210ENST00000635776 HNRNPUQ00839 825 aaKnown RBP eCLIP6.17□□□□□ -1.42
SCN1A-210ENST00000635776 PTPRKQ15262 1439 aa6.17□□□□□ -1.42
SCN1A-210ENST00000635776 RALBP1Q15311 655 aa6.17□□□□□ -1.42
SCN1A-210ENST00000635776 SPAG9O60271 1321 aaKnown RBP6.17□□□□□ -1.42
SCN1A-210ENST00000635776 DNMT1P26358 1616 aaKnown RBP6.16□□□□□ -1.42
SCN1A-210ENST00000635776 WASHC2AQ641Q2 1341 aa6.16□□□□□ -1.42
SCN1A-210ENST00000635776 WASHC2CQ9Y4E1 1318 aa6.16□□□□□ -1.42
SCN1A-210ENST00000635776 ATP10BO94823 1461 aa6.16□□□□□ -1.42
SCN1A-210ENST00000635776 HNRNPMP52272 730 aaKnown RBP eCLIP6.15□□□□□ -1.42
SCN1A-210ENST00000635776 TMC1Q8TDI8 760 aa6.15□□□□□ -1.42
SCN1A-210ENST00000635776 CNTLNQ9NXG0 1405 aa6.15□□□□□ -1.42
SCN1A-210ENST00000635776 TMF1P82094 1093 aa6.15□□□□□ -1.43
SCN1A-210ENST00000635776 ZNF644Q9H582 1327 aaPredicted RBP6.15□□□□□ -1.43
SCN1A-210ENST00000635776 EIF3AQ14152 1382 aaKnown RBP6.15□□□□□ -1.43
SCN1A-210ENST00000635776 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.15□□□□□ -1.431e-6■■■□□ 16.7
SCN1A-210ENST00000635776 CCDC7Q96M83 1385 aa6.15□□□□□ -1.43
SCN1A-210ENST00000635776 DCAF11Q8TEB1 546 aa6.14□□□□□ -1.43
SCN1A-210ENST00000635776 ARHGAP5Q13017 1502 aa6.14□□□□□ -1.43
SCN1A-210ENST00000635776 OSCARQ8IYS5 282 aa6.14□□□□□ -1.43
SCN1A-210ENST00000635776 ABCA8O94911 1581 aa6.13□□□□□ -1.43
SCN1A-210ENST00000635776 CEP170Q5SW79 1584 aa6.13□□□□□ -1.43
SCN1A-210ENST00000635776 GCC2Q8IWJ2 1684 aa6.13□□□□□ -1.43
SCN1A-210ENST00000635776 UHRF1BP1LA0JNW5 1464 aa6.13□□□□□ -1.43
SCN1A-210ENST00000635776 ARHGEF12Q9NZN5 1544 aa6.13□□□□□ -1.43
SCN1A-210ENST00000635776 USP47Q96K76 1375 aa6.13□□□□□ -1.43
SCN1A-210ENST00000635776 MAGI3Q5TCQ9 1506 aa6.13□□□□□ -1.43
SCN1A-210ENST00000635776 ABCC2Q92887 1545 aa6.12□□□□□ -1.43
SCN1A-210ENST00000635776 PLCH2O75038 1416 aa6.12□□□□□ -1.43
SCN1A-210ENST00000635776 ARHGEF5Q12774 1597 aa6.12□□□□□ -1.43
SCN1A-210ENST00000635776 RTEL1-TNFRSF6BF6WH68 1400 aa6.12□□□□□ -1.43
SCN1A-210ENST00000635776 PRKRIP1Q9H875 184 aaPredicted RBP6.12□□□□□ -1.43
SCN1A-210ENST00000635776 KDM2AQ9Y2K7 1162 aa6.12□□□□□ -1.43
SCN1A-210ENST00000635776 ERBINQ96RT1 1412 aa6.12□□□□□ -1.43
SCN1A-210ENST00000635776 FKBP8Q14318 412 aa6.12□□□□□ -1.43
SCN1A-210ENST00000635776 ERICH6Q7L0X2 663 aa6.11□□□□□ -1.43
SCN1A-210ENST00000635776 ABCC10Q5T3U5 1492 aa6.11□□□□□ -1.43
SCN1A-210ENST00000635776 ADCY10Q96PN6 1610 aa6.11□□□□□ -1.43
SCN1A-210ENST00000635776 NGEFQ8N5V2 710 aa6.11□□□□□ -1.43
SCN1A-210ENST00000635776 HIRIP3Q9BW71 556 aaPredicted RBP6.1□□□□□ -1.43
SCN1A-210ENST00000635776 PDE3BQ13370 1112 aa6.1□□□□□ -1.43
SCN1A-210ENST00000635776 FAM9BQ8IZU0 186 aa6.1□□□□□ -1.43
SCN1A-210ENST00000635776 TEX14Q8IWB6 1497 aa6.1□□□□□ -1.43
SCN1A-210ENST00000635776 KNSTRNQ9Y448 316 aa6.1□□□□□ -1.43
SCN1A-210ENST00000635776 DUOX2Q9NRD8 1548 aa6.1□□□□□ -1.43
SCN1A-210ENST00000635776 FOXD1Q16676 465 aa6.1□□□□□ -1.43
SCN1A-210ENST00000635776 UHRF1BP1Q6BDS2 1440 aa6.09□□□□□ -1.43
SCN1A-210ENST00000635776 SUPT16HQ9Y5B9 1047 aaKnown RBP6.09□□□□□ -1.43
SCN1A-210ENST00000635776 NLRP13Q86W25 1043 aa6.09□□□□□ -1.43
SCN1A-210ENST00000635776 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.09□□□□□ -1.43
SCN1A-210ENST00000635776 ZBED9Q6R2W3 1325 aa6.09□□□□□ -1.43
SCN1A-210ENST00000635776 MYBBP1AQ9BQG0 1328 aaKnown RBP6.09□□□□□ -1.43
SCN1A-210ENST00000635776 ARAP3Q8WWN8 1544 aa6.09□□□□□ -1.43
SCN1A-210ENST00000635776 KIF7Q2M1P5 1343 aa6.09□□□□□ -1.44
SCN1A-210ENST00000635776 RGL3Q3MIN7 710 aa6.08□□□□□ -1.44
SCN1A-210ENST00000635776 RALGAPBQ86X10 1494 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms