RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 GLI2P10070 1586 aa21.04■□□□□ 0.96
LIMS4-204ENST00000632897 HFM1A2PYH4 1435 aa21.04■□□□□ 0.96
LIMS4-204ENST00000632897 PTPRKQ15262 1439 aa21.03■□□□□ 0.96
LIMS4-204ENST00000632897 KDM5BQ9UGL1 1544 aa21.02■□□□□ 0.96
LIMS4-204ENST00000632897 KIF14Q15058 1648 aa21.02■□□□□ 0.96
LIMS4-204ENST00000632897 AKNAQ7Z591 1439 aa21.01■□□□□ 0.95
LIMS4-204ENST00000632897 PLEKHD1A6NEE1 506 aa21.01■□□□□ 0.95
LIMS4-204ENST00000632897 ZCCHC11Q5TAX3 1644 aaKnown RBP20.99■□□□□ 0.95
LIMS4-204ENST00000632897 GPATCH8Q9UKJ3 1502 aaKnown RBP20.97■□□□□ 0.95
LIMS4-204ENST00000632897 NAIPQ13075 1403 aa20.95■□□□□ 0.94
LIMS4-204ENST00000632897 DNMT1P26358 1616 aaKnown RBP20.95■□□□□ 0.94
LIMS4-204ENST00000632897 GCC2Q8IWJ2 1684 aa20.94■□□□□ 0.94
LIMS4-204ENST00000632897 TEX14Q8IWB6 1497 aa20.93■□□□□ 0.94
LIMS4-204ENST00000632897 DAPK1P53355 1430 aa20.92■□□□□ 0.94
LIMS4-204ENST00000632897 ROCK1Q13464 1354 aa20.91■□□□□ 0.94
LIMS4-204ENST00000632897 MAP3K4Q9Y6R4 1608 aa20.91■□□□□ 0.94
LIMS4-204ENST00000632897 CAMSAP2Q08AD1 1489 aa20.91■□□□□ 0.94
LIMS4-204ENST00000632897 PPRC1Q5VV67 1664 aaKnown RBP20.9■□□□□ 0.94
LIMS4-204ENST00000632897 WDR7Q9Y4E6 1490 aa20.9■□□□□ 0.94
LIMS4-204ENST00000632897 CDC42BPAQ5VT25 1732 aa20.9■□□□□ 0.94
LIMS4-204ENST00000632897 CFDP1Q9UEE9 299 aaPredicted RBP20.89■□□□□ 0.94
LIMS4-204ENST00000632897 ABCC5O15440 1437 aa20.88■□□□□ 0.93
LIMS4-204ENST00000632897 ACIN1Q9UKV3 1341 aaKnown RBP20.87■□□□□ 0.93
LIMS4-204ENST00000632897 CROCC2H7BZ55 1655 aa20.83■□□□□ 0.93
LIMS4-204ENST00000632897 ZNF644Q9H582 1327 aaPredicted RBP20.82■□□□□ 0.92
LIMS4-204ENST00000632897 PREX2Q70Z35 1606 aa20.81■□□□□ 0.92
LIMS4-204ENST00000632897 ADGBQ8N7X0 1667 aa20.81■□□□□ 0.92
LIMS4-204ENST00000632897 CHIC2Q9UKJ5 165 aa20.8■□□□□ 0.92
LIMS4-204ENST00000632897 ADGRL2O95490 1459 aa20.79■□□□□ 0.92
LIMS4-204ENST00000632897 RRP7BPQ9NSQ0 103 aa20.79■□□□□ 0.92
LIMS4-204ENST00000632897 SHANK2Q9UPX8 1470 aa20.79■□□□□ 0.92
LIMS4-204ENST00000632897 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.76■□□□□ 0.91
LIMS4-204ENST00000632897 ARHGEF5Q12774 1597 aa20.76■□□□□ 0.91
LIMS4-204ENST00000632897 CDC42BPBQ9Y5S2 1711 aa20.75■□□□□ 0.91
LIMS4-204ENST00000632897 TTC37Q6PGP7 1564 aa20.75■□□□□ 0.91
LIMS4-204ENST00000632897 CD109Q6YHK3 1445 aa20.74■□□□□ 0.91
LIMS4-204ENST00000632897 ZNF777Q9ULD5 760 aaPredicted RBP20.74■□□□□ 0.91
LIMS4-204ENST00000632897 TIMELESSQ9UNS1 1208 aa20.74■□□□□ 0.91
LIMS4-204ENST00000632897 MYO5CQ9NQX4 1742 aa20.73■□□□□ 0.91
LIMS4-204ENST00000632897 ZNF316A6NFI3 1004 aaPredicted RBP20.72■□□□□ 0.91
LIMS4-204ENST00000632897 NCOA1Q15788 1441 aa20.72■□□□□ 0.91
LIMS4-204ENST00000632897 SAMD9LQ8IVG5 1584 aa20.71■□□□□ 0.91
LIMS4-204ENST00000632897 ANKRD30AQ9BXX3 1397 aa20.7■□□□□ 0.9
LIMS4-204ENST00000632897 KCNH8Q96L42 1107 aa20.7■□□□□ 0.9
LIMS4-204ENST00000632897 PLEKHH2Q8IVE3 1493 aa20.69■□□□□ 0.9
LIMS4-204ENST00000632897 RSPH4AQ5TD94 716 aa20.69■□□□□ 0.9
LIMS4-204ENST00000632897 ARHGAP5Q13017 1502 aa20.68■□□□□ 0.9
LIMS4-204ENST00000632897 MBD5Q9P267 1494 aa20.68■□□□□ 0.9
LIMS4-204ENST00000632897 C9orf84Q5VXU9 1444 aa20.67■□□□□ 0.9
LIMS4-204ENST00000632897 KDM4FA0A1W2PPD8 638 aa20.67■□□□□ 0.9
LIMS4-204ENST00000632897 CCDC141Q6ZP82 1450 aa20.67■□□□□ 0.9
LIMS4-204ENST00000632897 COL17A1Q9UMD9 1497 aaPredicted RBP20.67■□□□□ 0.9
LIMS4-204ENST00000632897 ARAP3Q8WWN8 1544 aa20.65■□□□□ 0.9
LIMS4-204ENST00000632897 KIAA1107Q9UPP5 1409 aa20.65■□□□□ 0.9
LIMS4-204ENST00000632897 PLCH2O75038 1416 aa20.64■□□□□ 0.9
LIMS4-204ENST00000632897 ADGRL1O94910 1474 aa20.64■□□□□ 0.89
LIMS4-204ENST00000632897 TRIM52Q96A61 297 aa20.63■□□□□ 0.89
LIMS4-204ENST00000632897 ABCA9Q8IUA7 1624 aa20.63■□□□□ 0.89
LIMS4-204ENST00000632897 MAST1Q9Y2H9 1570 aa20.63■□□□□ 0.89
LIMS4-204ENST00000632897 TSPY4P0CV99 314 aa20.62■□□□□ 0.89
LIMS4-204ENST00000632897 TSPY10P0CW01 314 aa20.62■□□□□ 0.89
LIMS4-204ENST00000632897 SIN3AQ96ST3 1273 aa20.62■□□□□ 0.89
LIMS4-204ENST00000632897 DENND4BO75064 1496 aaPredicted RBP20.61■□□□□ 0.89
LIMS4-204ENST00000632897 SYCP2Q9BX26 1530 aa20.6■□□□□ 0.89
LIMS4-204ENST00000632897 NEUROD1Q13562 356 aa20.59■□□□□ 0.89
LIMS4-204ENST00000632897 MPHOSPH9Q99550 1183 aa20.59■□□□□ 0.89
LIMS4-204ENST00000632897 HNRNPMP52272 730 aaKnown RBP eCLIP20.58■□□□□ 0.89
LIMS4-204ENST00000632897 ANKRD50Q9ULJ7 1429 aa20.58■□□□□ 0.89
LIMS4-204ENST00000632897 EFCAB2Q5VUJ9 269 aa20.56■□□□□ 0.88
LIMS4-204ENST00000632897 DIEXFQ68CQ4 756 aaKnown RBP20.55■□□□□ 0.88
LIMS4-204ENST00000632897 ABCC1P33527 1531 aa20.55■□□□□ 0.88
LIMS4-204ENST00000632897 TONSLQ96HA7 1378 aa20.54■□□□□ 0.88
LIMS4-204ENST00000632897 KIF15Q9NS87 1388 aa20.54■□□□□ 0.88
LIMS4-204ENST00000632897 NEO1Q92859 1461 aa20.54■□□□□ 0.88
LIMS4-204ENST00000632897 PZPP20742 1482 aa20.53■□□□□ 0.88
LIMS4-204ENST00000632897 PLXNC1O60486 1568 aa20.53■□□□□ 0.88
LIMS4-204ENST00000632897 KDM5DQ9BY66 1539 aa20.52■□□□□ 0.88
LIMS4-204ENST00000632897 CFAP74Q9C0B2 1584 aa20.5■□□□□ 0.87
LIMS4-204ENST00000632897 ARHGEF12Q9NZN5 1544 aa20.5■□□□□ 0.87
LIMS4-204ENST00000632897 PPP1R15AO75807 674 aaPredicted RBP20.5■□□□□ 0.87
LIMS4-204ENST00000632897 SLC4A1APQ9BWU0 796 aaKnown RBP20.49■□□□□ 0.87
LIMS4-204ENST00000632897 ANKRD30BQ9BXX2 1392 aa20.48■□□□□ 0.87
LIMS4-204ENST00000632897 DUOX2Q9NRD8 1548 aa20.44■□□□□ 0.86
LIMS4-204ENST00000632897 FANCAO15360 1455 aa20.44■□□□□ 0.86
LIMS4-204ENST00000632897 RPRD2Q5VT52 1461 aaKnown RBP20.43■□□□□ 0.86
LIMS4-204ENST00000632897 RTEL1-TNFRSF6BF6WH68 1400 aa20.42■□□□□ 0.86
LIMS4-204ENST00000632897 UNC13BO14795 1591 aa20.41■□□□□ 0.86
LIMS4-204ENST00000632897 NUP155O75694 1391 aa20.41■□□□□ 0.86
LIMS4-204ENST00000632897 ERBINQ96RT1 1412 aa20.4■□□□□ 0.86
LIMS4-204ENST00000632897 TRAPPC8Q9Y2L5 1435 aa20.4■□□□□ 0.86
LIMS4-204ENST00000632897 ZFYVE16Q7Z3T8 1539 aa20.37■□□□□ 0.85
LIMS4-204ENST00000632897 FOXD1Q16676 465 aa20.37■□□□□ 0.85
LIMS4-204ENST00000632897 FRMPD1Q5SYB0 1578 aa20.36■□□□□ 0.85
LIMS4-204ENST00000632897 RAPGEF3O95398 923 aa20.35■□□□□ 0.85
LIMS4-204ENST00000632897 PKD2Q13563 968 aa20.35■□□□□ 0.85
LIMS4-204ENST00000632897 SPAG9O60271 1321 aaKnown RBP20.35■□□□□ 0.85
LIMS4-204ENST00000632897 FAM135AQ9P2D6 1515 aa20.34■□□□□ 0.85
LIMS4-204ENST00000632897 RICTORQ6R327 1708 aa20.34■□□□□ 0.85
LIMS4-204ENST00000632897 MAGI2Q86UL8 1455 aa20.34■□□□□ 0.85
LIMS4-204ENST00000632897 ARHGEF40Q8TER5 1519 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms