RNA–Protein interactions for RNA: ENST00000629886.2

UBE3A-219, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 3

Gene UBE3A, Length 436 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-219ENST00000629886 PTPRKQ15262 1439 aa8.63□□□□□ -1.03
UBE3A-219ENST00000629886 SETD1BQ9UPS6 1966 aaKnown RBP8.62□□□□□ -1.03
UBE3A-219ENST00000629886 ARID3CA6NKF2 412 aa8.62□□□□□ -1.03
UBE3A-219ENST00000629886 PPP6R1Q9UPN7 881 aa8.62□□□□□ -1.03
UBE3A-219ENST00000629886 ZFYVE16Q7Z3T8 1539 aa8.62□□□□□ -1.03
UBE3A-219ENST00000629886 FHOD3Q2V2M9 1422 aa8.62□□□□□ -1.03
UBE3A-219ENST00000629886 TRAPPC8Q9Y2L5 1435 aa8.61□□□□□ -1.03
UBE3A-219ENST00000629886 PKD2Q13563 968 aa8.6□□□□□ -1.03
UBE3A-219ENST00000629886 RICTORQ6R327 1708 aa8.59□□□□□ -1.03
UBE3A-219ENST00000629886 IGF1RP08069 1367 aa8.59□□□□□ -1.03
UBE3A-219ENST00000629886 ABCA9Q8IUA7 1624 aa8.58□□□□□ -1.04
UBE3A-219ENST00000629886 IQGAP2Q13576 1575 aa8.58□□□□□ -1.04
UBE3A-219ENST00000629886 SETBP1Q9Y6X0 1596 aa8.58□□□□□ -1.04
UBE3A-219ENST00000629886 EFCAB5A4FU69 1503 aa8.58□□□□□ -1.04
UBE3A-219ENST00000629886 ZRANB1Q9UGI0 708 aa8.57□□□□□ -1.04
UBE3A-219ENST00000629886 CPS1P31327 1500 aa8.57□□□□□ -1.04
UBE3A-219ENST00000629886 ZMYM4Q5VZL5 1548 aa8.55□□□□□ -1.04
UBE3A-219ENST00000629886 SHANK2Q9UPX8 1470 aa8.55□□□□□ -1.04
UBE3A-219ENST00000629886 C3P01024 1663 aa8.55□□□□□ -1.04
UBE3A-219ENST00000629886 BIVM-ERCC5R4GMW8 1640 aa8.54□□□□□ -1.04
UBE3A-219ENST00000629886 ATP10AO60312 1499 aa8.54□□□□□ -1.04
UBE3A-219ENST00000629886 TCOF1Q13428 1488 aaKnown RBP8.54□□□□□ -1.04
UBE3A-219ENST00000629886 MAGI2Q86UL8 1455 aa8.54□□□□□ -1.04
UBE3A-219ENST00000629886 C9orf84Q5VXU9 1444 aa8.54□□□□□ -1.04
UBE3A-219ENST00000629886 HECW1Q76N89 1606 aa8.53□□□□□ -1.04
UBE3A-219ENST00000629886 RAPGEF2Q9Y4G8 1499 aa8.52□□□□□ -1.05
UBE3A-219ENST00000629886 ESF1Q9H501 851 aaKnown RBP8.52□□□□□ -1.05
UBE3A-219ENST00000629886 ABCA8O94911 1581 aa8.52□□□□□ -1.05
UBE3A-219ENST00000629886 PLA2R1Q13018 1463 aa8.51□□□□□ -1.05
UBE3A-219ENST00000629886 LRRC7Q96NW7 1537 aa8.5□□□□□ -1.05
UBE3A-219ENST00000629886 UGGT2Q9NYU1 1516 aa8.5□□□□□ -1.05
UBE3A-219ENST00000629886 ATP10BO94823 1461 aa8.5□□□□□ -1.05
UBE3A-219ENST00000629886 CARMIL1Q5VZK9 1371 aa8.49□□□□□ -1.05
UBE3A-219ENST00000629886 YY1P25490 414 aa8.49□□□□□ -1.05
UBE3A-219ENST00000629886 RXRBP28702 533 aa8.48□□□□□ -1.05
UBE3A-219ENST00000629886 SENP3-EIF4A1A0A087X0R7 540 aa8.47□□□□□ -1.05
UBE3A-219ENST00000629886 FOXD1Q16676 465 aa8.47□□□□□ -1.05
UBE3A-219ENST00000629886 ZNF772Q68DY9 489 aaPredicted RBP8.46□□□□□ -1.06
UBE3A-219ENST00000629886 NPATQ14207 1427 aa8.45□□□□□ -1.06
UBE3A-219ENST00000629886 VWDEQ8N2E2 1590 aa8.44□□□□□ -1.06
UBE3A-219ENST00000629886 SCAPERQ9BY12 1400 aa8.44□□□□□ -1.06
UBE3A-219ENST00000629886 NUTM2BA6NNL0 878 aaPredicted RBP8.43□□□□□ -1.06
UBE3A-219ENST00000629886 NUTM2EB1AL46 878 aaPredicted RBP8.43□□□□□ -1.06
UBE3A-219ENST00000629886 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.43□□□□□ -1.06
UBE3A-219ENST00000629886 HNRNPUL2Q1KMD3 747 aaKnown RBP8.43□□□□□ -1.06
UBE3A-219ENST00000629886 NUTM2DQ5VT03 806 aaPredicted RBP8.43□□□□□ -1.06
UBE3A-219ENST00000629886 NUTM2AQ8IVF1 878 aaPredicted RBP8.43□□□□□ -1.06
UBE3A-219ENST00000629886 RNF17Q9BXT8 1623 aaKnown RBP8.42□□□□□ -1.06
UBE3A-219ENST00000629886 CEP170BQ9Y4F5 1589 aaPredicted RBP8.41□□□□□ -1.06
UBE3A-219ENST00000629886 CDK12Q9NYV4 1490 aaPredicted RBP8.41□□□□□ -1.06
UBE3A-219ENST00000629886 FAM135BQ49AJ0 1406 aa8.41□□□□□ -1.06
UBE3A-219ENST00000629886 KIF27Q86VH2 1401 aa8.41□□□□□ -1.06
UBE3A-219ENST00000629886 ZMYM3Q14202 1370 aa8.41□□□□□ -1.06
UBE3A-219ENST00000629886 MEX3CQ5U5Q3 659 aaKnown RBP8.41□□□□□ -1.06
UBE3A-219ENST00000629886 MYT1LQ9UL68 1186 aa8.41□□□□□ -1.06
UBE3A-219ENST00000629886 NEURL4Q96JN8 1562 aa8.4□□□□□ -1.06
UBE3A-219ENST00000629886 CNTLNQ9NXG0 1405 aa8.4□□□□□ -1.06
UBE3A-219ENST00000629886 SUPT6HQ7KZ85 1726 aaKnown RBP8.4□□□□□ -1.07
UBE3A-219ENST00000629886 CFAP74Q9C0B2 1584 aa8.39□□□□□ -1.07
UBE3A-219ENST00000629886 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.39□□□□□ -1.073e-8■□□□□ 10.1
UBE3A-219ENST00000629886 ZNF142P52746 1687 aaPredicted RBP8.39□□□□□ -1.07
UBE3A-219ENST00000629886 LRP6O75581 1613 aa8.39□□□□□ -1.07
UBE3A-219ENST00000629886 MYO3AQ8NEV4 1616 aa8.39□□□□□ -1.07
UBE3A-219ENST00000629886 RGS12O14924 1447 aa8.38□□□□□ -1.07
UBE3A-219ENST00000629886 AFAP1Q8N556 730 aa8.37□□□□□ -1.07
UBE3A-219ENST00000629886 AGLP35573 1532 aa8.37□□□□□ -1.07
UBE3A-219ENST00000629886 JCADQ9P266 1359 aa8.36□□□□□ -1.07
UBE3A-219ENST00000629886 LRP5O75197 1615 aa8.36□□□□□ -1.07
UBE3A-219ENST00000629886 STRCP1A6NGW2 1772 aa8.35□□□□□ -1.07
UBE3A-219ENST00000629886 ANKLE2Q86XL3 938 aa8.35□□□□□ -1.07
UBE3A-219ENST00000629886 RAPGEF6Q8TEU7 1601 aa8.35□□□□□ -1.07
UBE3A-219ENST00000629886 P3H3Q8IVL6 736 aa8.34□□□□□ -1.07
UBE3A-219ENST00000629886 DIP2CQ9Y2E4 1556 aa8.34□□□□□ -1.07
UBE3A-219ENST00000629886 ATAD2Q6PL18 1390 aa8.34□□□□□ -1.07
UBE3A-219ENST00000629886 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.34□□□□□ -1.076e-7■□□□□ 8.4
UBE3A-219ENST00000629886 GOLGA3Q08378 1498 aa8.33□□□□□ -1.08
UBE3A-219ENST00000629886 DNMT1P26358 1616 aaKnown RBP8.33□□□□□ -1.08
UBE3A-219ENST00000629886 NPHP4O75161 1426 aaPredicted RBP8.33□□□□□ -1.08
UBE3A-219ENST00000629886 A2ML1A8K2U0 1454 aa8.32□□□□□ -1.08
UBE3A-219ENST00000629886 PLEKHD1A6NEE1 506 aa8.32□□□□□ -1.08
UBE3A-219ENST00000629886 POLR1AO95602 1720 aaPredicted RBP8.32□□□□□ -1.08
UBE3A-219ENST00000629886 REREQ9P2R6 1566 aa8.31□□□□□ -1.08
UBE3A-219ENST00000629886 ROBO1Q9Y6N7 1651 aa8.31□□□□□ -1.08
UBE3A-219ENST00000629886 CDK13Q14004 1512 aaKnown RBP8.31□□□□□ -1.08
UBE3A-219ENST00000629886 SLC34A2O95436 690 aa8.31□□□□□ -1.08
UBE3A-219ENST00000629886 FAM9AQ8IZU1 332 aaPredicted RBP8.31□□□□□ -1.08
UBE3A-219ENST00000629886 SYNMO15061 1565 aa8.31□□□□□ -1.08
UBE3A-219ENST00000629886 AFF2P51816 1311 aa8.3□□□□□ -1.08
UBE3A-219ENST00000629886 SPATA31A6Q5VVP1 1343 aa8.3□□□□□ -1.08
UBE3A-219ENST00000629886 C1QTNF8P60827 252 aa8.3□□□□□ -1.08
UBE3A-219ENST00000629886 RBM6P78332 1123 aaKnown RBP8.3□□□□□ -1.08
UBE3A-219ENST00000629886 QTRT2Q9H974 415 aaKnown RBP8.3□□□□□ -1.08
UBE3A-219ENST00000629886 PLCH2O75038 1416 aa8.29□□□□□ -1.08
UBE3A-219ENST00000629886 PSDA5PKW4 1024 aaPredicted RBP8.29□□□□□ -1.08
UBE3A-219ENST00000629886 ZNF518AQ6AHZ1 1483 aa8.29□□□□□ -1.08
UBE3A-219ENST00000629886 MROH2AA6NES4 1674 aa8.29□□□□□ -1.08
UBE3A-219ENST00000629886 ABCA6Q8N139 1617 aa8.29□□□□□ -1.08
UBE3A-219ENST00000629886 MED14O60244 1454 aa8.28□□□□□ -1.08
UBE3A-219ENST00000629886 HRCP23327 699 aa8.28□□□□□ -1.08
UBE3A-219ENST00000629886 EP400Q96L91 3159 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms