RNA–Protein interactions for RNA: ENST00000629765.2

NTRK3-221, Transcript of neurotrophic receptor tyrosine kinase 3, humanhuman

TSL 1 (best) BASIC

Gene NTRK3, Length 2,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK3-221ENST00000629765 PTPN23Q9H3S7 1636 aa12.94□□□□□ -0.34
NTRK3-221ENST00000629765 GPATCH8Q9UKJ3 1502 aaKnown RBP12.94□□□□□ -0.34
NTRK3-221ENST00000629765 ZCCHC11Q5TAX3 1644 aaKnown RBP12.92□□□□□ -0.34
NTRK3-221ENST00000629765 KDM5BQ9UGL1 1544 aa12.89□□□□□ -0.35
NTRK3-221ENST00000629765 ABCC10Q5T3U5 1492 aa12.88□□□□□ -0.35
NTRK3-221ENST00000629765 SETD5Q9C0A6 1442 aa12.88□□□□□ -0.35
NTRK3-221ENST00000629765 TTC37Q6PGP7 1564 aa12.88□□□□□ -0.35
NTRK3-221ENST00000629765 TRIM52Q96A61 297 aa12.88□□□□□ -0.35
NTRK3-221ENST00000629765 CAMSAP2Q08AD1 1489 aa12.87□□□□□ -0.35
NTRK3-221ENST00000629765 ASXL2Q76L83 1435 aa12.87□□□□□ -0.35
NTRK3-221ENST00000629765 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.87□□□□□ -0.35
NTRK3-221ENST00000629765 MIA2Q96PC5 1412 aa12.86□□□□□ -0.35
NTRK3-221ENST00000629765 ABCC5O15440 1437 aa12.86□□□□□ -0.35
NTRK3-221ENST00000629765 RIMBP3CA6NJZ7 1639 aa12.86□□□□□ -0.35
NTRK3-221ENST00000629765 RIMBP3BA6NNM3 1639 aa12.86□□□□□ -0.35
NTRK3-221ENST00000629765 RIMBP3Q9UFD9 1639 aa12.86□□□□□ -0.35
NTRK3-221ENST00000629765 UHRF1BP1LA0JNW5 1464 aa12.85□□□□□ -0.35
NTRK3-221ENST00000629765 FOXD1Q16676 465 aa12.85□□□□□ -0.35
NTRK3-221ENST00000629765 DAPK1P53355 1430 aa12.85□□□□□ -0.35
NTRK3-221ENST00000629765 ARHGAP5Q13017 1502 aa12.85□□□□□ -0.35
NTRK3-221ENST00000629765 SIN3AQ96ST3 1273 aa12.84□□□□□ -0.35
NTRK3-221ENST00000629765 MYT1LQ9UL68 1186 aa12.84□□□□□ -0.35
NTRK3-221ENST00000629765 CDC42BPAQ5VT25 1732 aa12.84□□□□□ -0.35
NTRK3-221ENST00000629765 TCOF1Q13428 1488 aaKnown RBP12.83□□□□□ -0.36
NTRK3-221ENST00000629765 AFAP1Q8N556 730 aa12.82□□□□□ -0.36
NTRK3-221ENST00000629765 NAIPQ13075 1403 aa12.82□□□□□ -0.36
NTRK3-221ENST00000629765 WDR7Q9Y4E6 1490 aa12.82□□□□□ -0.36
NTRK3-221ENST00000629765 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.82□□□□□ -0.36
NTRK3-221ENST00000629765 TSPY4P0CV99 314 aa12.82□□□□□ -0.36
NTRK3-221ENST00000629765 TSPY10P0CW01 314 aa12.82□□□□□ -0.36
NTRK3-221ENST00000629765 KDM6BO15054 1643 aa12.81□□□□□ -0.36
NTRK3-221ENST00000629765 MAPKBP1O60336 1514 aa12.8□□□□□ -0.36
NTRK3-221ENST00000629765 CDC42BPBQ9Y5S2 1711 aa12.8□□□□□ -0.36
NTRK3-221ENST00000629765 EFCAB2Q5VUJ9 269 aa12.79□□□□□ -0.36
NTRK3-221ENST00000629765 HFM1A2PYH4 1435 aa12.78□□□□□ -0.36
NTRK3-221ENST00000629765 SYCP2Q9BX26 1530 aa12.78□□□□□ -0.36
NTRK3-221ENST00000629765 SAMD9LQ8IVG5 1584 aa12.78□□□□□ -0.36
NTRK3-221ENST00000629765 ITSN2Q9NZM3 1697 aa12.78□□□□□ -0.36
NTRK3-221ENST00000629765 FAM69CQ0P6D2 419 aa12.77□□□□□ -0.36
NTRK3-221ENST00000629765 ARHGEF12Q9NZN5 1544 aa12.76□□□□□ -0.37
NTRK3-221ENST00000629765 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.76□□□□□ -0.37
NTRK3-221ENST00000629765 PLCH2O75038 1416 aa12.76□□□□□ -0.37
NTRK3-221ENST00000629765 SUPT16HQ9Y5B9 1047 aaKnown RBP12.75□□□□□ -0.37
NTRK3-221ENST00000629765 DNMT1P26358 1616 aaKnown RBP12.75□□□□□ -0.37
NTRK3-221ENST00000629765 TRAPPC8Q9Y2L5 1435 aa12.75□□□□□ -0.37
NTRK3-221ENST00000629765 PREX2Q70Z35 1606 aa12.75□□□□□ -0.37
NTRK3-221ENST00000629765 MBD5Q9P267 1494 aa12.74□□□□□ -0.37
NTRK3-221ENST00000629765 C9orf84Q5VXU9 1444 aa12.74□□□□□ -0.37
NTRK3-221ENST00000629765 NCOA1Q15788 1441 aa12.74□□□□□ -0.37
NTRK3-221ENST00000629765 RAPGEF3O95398 923 aa12.74□□□□□ -0.37
NTRK3-221ENST00000629765 AKNAQ7Z591 1439 aa12.74□□□□□ -0.37
NTRK3-221ENST00000629765 MYO5CQ9NQX4 1742 aa12.73□□□□□ -0.37
NTRK3-221ENST00000629765 DDX10Q13206 875 aaKnown RBP12.73□□□□□ -0.37
NTRK3-221ENST00000629765 CD109Q6YHK3 1445 aa12.73□□□□□ -0.37
NTRK3-221ENST00000629765 BCL11AQ9H165 835 aa12.73□□□□□ -0.37
NTRK3-221ENST00000629765 FANCAO15360 1455 aa12.72□□□□□ -0.37
NTRK3-221ENST00000629765 SLC4A1APQ9BWU0 796 aaKnown RBP12.71□□□□□ -0.37
NTRK3-221ENST00000629765 ANKRD30AQ9BXX3 1397 aa12.71□□□□□ -0.37
NTRK3-221ENST00000629765 MPHOSPH9Q99550 1183 aa12.71□□□□□ -0.38
NTRK3-221ENST00000629765 KIF15Q9NS87 1388 aa12.71□□□□□ -0.38
NTRK3-221ENST00000629765 SCAPERQ9BY12 1400 aa12.71□□□□□ -0.38
NTRK3-221ENST00000629765 CCDC141Q6ZP82 1450 aa12.7□□□□□ -0.38
NTRK3-221ENST00000629765 SPAG9O60271 1321 aaKnown RBP12.69□□□□□ -0.38
NTRK3-221ENST00000629765 ANKRD50Q9ULJ7 1429 aa12.68□□□□□ -0.38
NTRK3-221ENST00000629765 HIRIP3Q9BW71 556 aaPredicted RBP12.68□□□□□ -0.38
NTRK3-221ENST00000629765 ADGRL1O94910 1474 aa12.68□□□□□ -0.38
NTRK3-221ENST00000629765 ROCK1Q13464 1354 aa12.66□□□□□ -0.38
NTRK3-221ENST00000629765 TIMELESSQ9UNS1 1208 aa12.66□□□□□ -0.38
NTRK3-221ENST00000629765 NUP155O75694 1391 aa12.66□□□□□ -0.38
NTRK3-221ENST00000629765 TRHP20396 242 aaPredicted RBP12.66□□□□□ -0.38
NTRK3-221ENST00000629765 ABCA9Q8IUA7 1624 aa12.65□□□□□ -0.38
NTRK3-221ENST00000629765 DENND4BO75064 1496 aaPredicted RBP12.65□□□□□ -0.38
NTRK3-221ENST00000629765 PKD2Q13563 968 aa12.65□□□□□ -0.38
NTRK3-221ENST00000629765 PPP1R15AO75807 674 aaPredicted RBP12.64□□□□□ -0.39
NTRK3-221ENST00000629765 TSPOAP1O95153 1857 aa12.64□□□□□ -0.39
NTRK3-221ENST00000629765 ABCC1P33527 1531 aa12.64□□□□□ -0.39
NTRK3-221ENST00000629765 PLEKHH2Q8IVE3 1493 aa12.63□□□□□ -0.39
NTRK3-221ENST00000629765 CROCC2H7BZ55 1655 aa12.63□□□□□ -0.39
NTRK3-221ENST00000629765 GCC2Q8IWJ2 1684 aa12.63□□□□□ -0.39
NTRK3-221ENST00000629765 RSPH4AQ5TD94 716 aa12.63□□□□□ -0.39
NTRK3-221ENST00000629765 KIAA1107Q9UPP5 1409 aa12.62□□□□□ -0.39
NTRK3-221ENST00000629765 TONSLQ96HA7 1378 aa12.61□□□□□ -0.39
NTRK3-221ENST00000629765 KIF3BO15066 747 aa12.61□□□□□ -0.39
NTRK3-221ENST00000629765 ADGRL2O95490 1459 aa12.61□□□□□ -0.39
NTRK3-221ENST00000629765 ARHGEF5Q12774 1597 aa12.61□□□□□ -0.39
NTRK3-221ENST00000629765 BCANQ96GW7 911 aa12.6□□□□□ -0.39
NTRK3-221ENST00000629765 ADGBQ8N7X0 1667 aa12.59□□□□□ -0.39
NTRK3-221ENST00000629765 ANP32CO43423 234 aa12.59□□□□□ -0.39
NTRK3-221ENST00000629765 GGT6Q6P531 493 aa12.59□□□□□ -0.39
NTRK3-221ENST00000629765 SHANK2Q9UPX8 1470 aa12.59□□□□□ -0.39
NTRK3-221ENST00000629765 PRKCSHP14314 528 aaPredicted RBP12.59□□□□□ -0.39
NTRK3-221ENST00000629765 PZPP20742 1482 aa12.57□□□□□ -0.4
NTRK3-221ENST00000629765 ZNF326Q5BKZ1 582 aaKnown RBP12.57□□□□□ -0.4
NTRK3-221ENST00000629765 FKBP8Q14318 412 aa12.56□□□□□ -0.4
NTRK3-221ENST00000629765 DIP2BQ9P265 1576 aa12.56□□□□□ -0.4
NTRK3-221ENST00000629765 TSHZ2Q9NRE2 1034 aa12.55□□□□□ -0.4
NTRK3-221ENST00000629765 MLECQ14165 292 aa12.54□□□□□ -0.4
NTRK3-221ENST00000629765 RGL3Q3MIN7 710 aa12.54□□□□□ -0.4
NTRK3-221ENST00000629765 ZFYVE16Q7Z3T8 1539 aa12.54□□□□□ -0.4
NTRK3-221ENST00000629765 CCER2I3L3R5 266 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms