RNA–Protein interactions for RNA: ENST00000629717.1

NRXN1-231, Transcript of neurexin 1, human

TSL 2

Gene NRXN1, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-231	ENST00000629717	ZCCHC11	Q5TAX3	1644 aa	Known RBP	14.54	□□□□□ -0.08
NRXN1-231	ENST00000629717	GLI2	P10070	1586 aa		14.53	□□□□□ -0.08
NRXN1-231	ENST00000629717	EPRS	P07814	1512 aa	Known RBP	14.52	□□□□□ -0.08
NRXN1-231	ENST00000629717	SPDYE4	A6NLX3	237 aa		14.52	□□□□□ -0.09
NRXN1-231	ENST00000629717	UBTF	P17480	764 aa	Known RBP	14.52	□□□□□ -0.09
NRXN1-231	ENST00000629717	WDR7	Q9Y4E6	1490 aa		14.51	□□□□□ -0.09
NRXN1-231	ENST00000629717	FHOD3	Q2V2M9	1422 aa		14.49	□□□□□ -0.09
NRXN1-231	ENST00000629717	PIP4P2	Q8N4L2	257 aa		14.48	□□□□□ -0.09
NRXN1-231	ENST00000629717	ATP10B	O94823	1461 aa		14.48	□□□□□ -0.09
NRXN1-231	ENST00000629717	EFCAB5	A4FU69	1503 aa		14.47	□□□□□ -0.09
NRXN1-231	ENST00000629717	ARID3C	A6NKF2	412 aa		14.47	□□□□□ -0.09
NRXN1-231	ENST00000629717	KCNH8	Q96L42	1107 aa		14.47	□□□□□ -0.09
NRXN1-231	ENST00000629717	CLEC11A	Q9Y240	323 aa		14.47	□□□□□ -0.09
NRXN1-231	ENST00000629717	FXR2	P51116	673 aa	Known RBP eCLIP	14.46	□□□□□ -0.09
NRXN1-231	ENST00000629717	TSPOAP1	O95153	1857 aa		14.44	□□□□□ -0.1
NRXN1-231	ENST00000629717	KDM6B	O15054	1643 aa		14.43	□□□□□ -0.1
NRXN1-231	ENST00000629717	RAPGEF6	Q8TEU7	1601 aa		14.43	□□□□□ -0.1
NRXN1-231	ENST00000629717	MAP3K4	Q9Y6R4	1608 aa		14.43	□□□□□ -0.1
NRXN1-231	ENST00000629717	NUP153	P49790	1475 aa	Known RBP	14.43	□□□□□ -0.1
NRXN1-231	ENST00000629717	TEX14	Q8IWB6	1497 aa		14.42	□□□□□ -0.1
NRXN1-231	ENST00000629717	CD109	Q6YHK3	1445 aa		14.41	□□□□□ -0.1
NRXN1-231	ENST00000629717	PPRC1	Q5VV67	1664 aa	Known RBP	14.41	□□□□□ -0.1
NRXN1-231	ENST00000629717	ARHGAP35	Q9NRY4	1499 aa		14.38	□□□□□ -0.11
NRXN1-231	ENST00000629717	MAGI3	Q5TCQ9	1506 aa		14.38	□□□□□ -0.11
NRXN1-231	ENST00000629717	FMN1	Q68DA7	1419 aa		14.37	□□□□□ -0.11
NRXN1-231	ENST00000629717	COL17A1	Q9UMD9	1497 aa	Predicted RBP	14.37	□□□□□ -0.11
NRXN1-231	ENST00000629717	PLEKHD1	A6NEE1	506 aa		14.36	□□□□□ -0.11
NRXN1-231	ENST00000629717	CFAP43	Q8NDM7	1665 aa		14.36	□□□□□ -0.11
NRXN1-231	ENST00000629717	ABCA9	Q8IUA7	1624 aa		14.31	□□□□□ -0.12
NRXN1-231	ENST00000629717	ATP1B4	Q9UN42	357 aa	Predicted RBP	14.31	□□□□□ -0.12
NRXN1-231	ENST00000629717	PRR29	P0C7W0	189 aa		14.3	□□□□□ -0.12
NRXN1-231	ENST00000629717	PHLDB1	Q86UU1	1377 aa		14.3	□□□□□ -0.12
NRXN1-231	ENST00000629717	CDK13	Q14004	1512 aa	Known RBP	14.28	□□□□□ -0.12
NRXN1-231	ENST00000629717	CDK11A	Q9UQ88	783 aa	Predicted RBP	14.28	□□□□□ -0.12
NRXN1-231	ENST00000629717	ARAP3	Q8WWN8	1544 aa		14.27	□□□□□ -0.12
NRXN1-231	ENST00000629717	PRKAR2A	P13861	404 aa	Known RBP	14.27	□□□□□ -0.13
NRXN1-231	ENST00000629717	PROM2	Q8N271	834 aa		14.27	□□□□□ -0.13
NRXN1-231	ENST00000629717	HECW1	Q76N89	1606 aa		14.26	□□□□□ -0.13
NRXN1-231	ENST00000629717	CLIP1	P30622	1438 aa		14.26	□□□□□ -0.13
NRXN1-231	ENST00000629717	NEO1	Q92859	1461 aa		14.25	□□□□□ -0.13
NRXN1-231	ENST00000629717	STAG3	Q9UJ98	1225 aa		14.25	□□□□□ -0.13
NRXN1-231	ENST00000629717	KDM4F	A0A1W2PPD8	638 aa		14.24	□□□□□ -0.13
NRXN1-231	ENST00000629717	CASKIN1	Q8WXD9	1431 aa		14.24	□□□□□ -0.13
NRXN1-231	ENST00000629717	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	14.23	□□□□□ -0.13
NRXN1-231	ENST00000629717	RAPGEF3	O95398	923 aa		14.21	□□□□□ -0.13
NRXN1-231	ENST00000629717	TRO	Q12816	1431 aa	Predicted RBP	14.19	□□□□□ -0.14
NRXN1-231	ENST00000629717	FANCA	O15360	1455 aa		14.18	□□□□□ -0.14
NRXN1-231	ENST00000629717	TTC37	Q6PGP7	1564 aa		14.18	□□□□□ -0.14
NRXN1-231	ENST00000629717	PLCH2	O75038	1416 aa		14.18	□□□□□ -0.14
NRXN1-231	ENST00000629717	AKNA	Q7Z591	1439 aa		14.18	□□□□□ -0.14
NRXN1-231	ENST00000629717	CHADL	Q6NUI6	762 aa		14.18	□□□□□ -0.14
NRXN1-231	ENST00000629717	CCDC18	Q5T9S5	1454 aa		14.18	□□□□□ -0.14
NRXN1-231	ENST00000629717	FYCO1	Q9BQS8	1478 aa		14.18	□□□□□ -0.14
NRXN1-231	ENST00000629717	PCF11	O94913	1555 aa	Known RBP	14.17	□□□□□ -0.14
NRXN1-231	ENST00000629717	DENND4B	O75064	1496 aa	Predicted RBP	14.15	□□□□□ -0.14
NRXN1-231	ENST00000629717	ADGRL1	O94910	1474 aa		14.15	□□□□□ -0.14
NRXN1-231	ENST00000629717	EFCAB2	Q5VUJ9	269 aa		14.15	□□□□□ -0.14
NRXN1-231	ENST00000629717	CEP162	Q5TB80	1403 aa		14.15	□□□□□ -0.14
NRXN1-231	ENST00000629717	CFAP74	Q9C0B2	1584 aa		14.13	□□□□□ -0.15
NRXN1-231	ENST00000629717	KIF14	Q15058	1648 aa		14.13	□□□□□ -0.15
NRXN1-231	ENST00000629717	LOC105371045	A0A1W2PR82	267 aa		14.13	□□□□□ -0.15
NRXN1-231	ENST00000629717	LRRIQ1	Q96JM4	1722 aa		14.12	□□□□□ -0.15
NRXN1-231	ENST00000629717	FRMPD1	Q5SYB0	1578 aa		14.11	□□□□□ -0.15
NRXN1-231	ENST00000629717	SCAPER	Q9BY12	1400 aa		14.1	□□□□□ -0.15
NRXN1-231	ENST00000629717	HAX1	O00165	279 aa		14.1	□□□□□ -0.15
NRXN1-231	ENST00000629717	POGZ	Q7Z3K3	1410 aa		14.07	□□□□□ -0.16
NRXN1-231	ENST00000629717	ARHGAP5	Q13017	1502 aa		14.07	□□□□□ -0.16
NRXN1-231	ENST00000629717	MYO5C	Q9NQX4	1742 aa		14.07	□□□□□ -0.16
NRXN1-231	ENST00000629717	MAGI2	Q86UL8	1455 aa		14.06	□□□□□ -0.16
NRXN1-231	ENST00000629717	CREBZF	Q9NS37	354 aa		14.06	□□□□□ -0.16
NRXN1-231	ENST00000629717	RICTOR	Q6R327	1708 aa		14.06	□□□□□ -0.16
NRXN1-231	ENST00000629717	ZMYM4	Q5VZL5	1548 aa		14.05	□□□□□ -0.16
NRXN1-231	ENST00000629717	ARID4B	Q4LE39	1312 aa	Predicted RBP	14.04	□□□□□ -0.16
NRXN1-231	ENST00000629717	MTUS2	Q5JR59	1369 aa		14.04	□□□□□ -0.16
NRXN1-231	ENST00000629717	ARHGEF40	Q8TER5	1519 aa		14.04	□□□□□ -0.16
NRXN1-231	ENST00000629717	AFAP1	Q8N556	730 aa		14.03	□□□□□ -0.16
NRXN1-231	ENST00000629717	ZNF518A	Q6AHZ1	1483 aa		14.02	□□□□□ -0.16
NRXN1-231	ENST00000629717	YEATS2	Q9ULM3	1422 aa		14.02	□□□□□ -0.16
NRXN1-231	ENST00000629717	FARP1	Q9Y4F1	1045 aa	Predicted RBP	14.02	□□□□□ -0.17
NRXN1-231	ENST00000629717	ZFYVE16	Q7Z3T8	1539 aa		14.01	□□□□□ -0.17
NRXN1-231	ENST00000629717	GPATCH8	Q9UKJ3	1502 aa	Known RBP	14	□□□□□ -0.17
NRXN1-231	ENST00000629717	CDC42BPB	Q9Y5S2	1711 aa		14	□□□□□ -0.17
NRXN1-231	ENST00000629717	PREX2	Q70Z35	1606 aa		14	□□□□□ -0.17
NRXN1-231	ENST00000629717	CCNB3	Q8WWL7	1395 aa		13.99	□□□□□ -0.17
NRXN1-231	ENST00000629717	C19orf67	A6NJJ6	358 aa		13.99	□□□□□ -0.17
NRXN1-231	ENST00000629717	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.99	□□□□□ -0.17
NRXN1-231	ENST00000629717	VPS8	Q8N3P4	1428 aa		13.98	□□□□□ -0.17
NRXN1-231	ENST00000629717	EVX2	Q03828	476 aa		13.98	□□□□□ -0.17
NRXN1-231	ENST00000629717	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.98	□□□□□ -0.17
NRXN1-231	ENST00000629717	ATP10A	O60312	1499 aa		13.98	□□□□□ -0.17
NRXN1-231	ENST00000629717	ABCC1	P33527	1531 aa		13.97	□□□□□ -0.17
NRXN1-231	ENST00000629717	ARHGEF12	Q9NZN5	1544 aa		13.97	□□□□□ -0.17
NRXN1-231	ENST00000629717	SP7	Q8TDD2	431 aa	Predicted RBP	13.97	□□□□□ -0.17
NRXN1-231	ENST00000629717	TRAPPC8	Q9Y2L5	1435 aa		13.97	□□□□□ -0.17
NRXN1-231	ENST00000629717	KDM5C	P41229	1560 aa		13.96	□□□□□ -0.17
NRXN1-231	ENST00000629717	ADAMTSL3	P82987	1691 aa		13.96	□□□□□ -0.17
NRXN1-231	ENST00000629717	MLH3	Q9UHC1	1453 aa		13.96	□□□□□ -0.17
NRXN1-231	ENST00000629717	MYT1L	Q9UL68	1186 aa		13.96	□□□□□ -0.17
NRXN1-231	ENST00000629717	CDC42BPA	Q5VT25	1732 aa		13.95	□□□□□ -0.18
NRXN1-231	ENST00000629717	EHBP1L1	Q8N3D4	1523 aa		13.95	□□□□□ -0.18

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