RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 CSB-PGBD3P0DP91 1061 aa14.98□□□□□ -0.01
SHPRH-211ENST00000629427 APBB1O00213 710 aa14.98□□□□□ -0.01
SHPRH-211ENST00000629427 TMX4Q9H1E5 349 aaPredicted RBP14.97□□□□□ -0.01
SHPRH-211ENST00000629427 ERICH6BQ5W0A0 696 aa14.97□□□□□ -0.01
SHPRH-211ENST00000629427 CCDC9Q9Y3X0 531 aaKnown RBP14.96□□□□□ -0.01
SHPRH-211ENST00000629427 B4GALNT3Q6L9W6 998 aa14.96□□□□□ -0.01
SHPRH-211ENST00000629427 HDGFL2Q7Z4V5 671 aaPredicted RBP14.96□□□□□ -0.02
SHPRH-211ENST00000629427 KIAA1211Q6ZU35 1233 aa14.94□□□□□ -0.02
SHPRH-211ENST00000629427 RTN4Q9NQC3 1192 aaKnown RBP14.94□□□□□ -0.02
SHPRH-211ENST00000629427 NACADO15069 1562 aa14.93□□□□□ -0.02
SHPRH-211ENST00000629427 CHAF1AQ13111 956 aaPredicted RBP14.93□□□□□ -0.02
SHPRH-211ENST00000629427 FHAD1B1AJZ9 1412 aa14.92□□□□□ -0.02
SHPRH-211ENST00000629427 NOP58Q9Y2X3 529 aaKnown RBP14.92□□□□□ -0.02
SHPRH-211ENST00000629427 CHMP3Q9Y3E7 222 aa14.9□□□□□ -0.02
SHPRH-211ENST00000629427 MYO15BQ96JP2 1530 aa14.9□□□□□ -0.02
SHPRH-211ENST00000629427 KIAA2012Q0VF49 1180 aa14.89□□□□□ -0.03
SHPRH-211ENST00000629427 CFAP44Q96MT7 982 aa14.89□□□□□ -0.03
SHPRH-211ENST00000629427 G3V3G9 751 aa14.88□□□□□ -0.03
SHPRH-211ENST00000629427 DCAF8Q5TAQ9 597 aa14.88□□□□□ -0.03
SHPRH-211ENST00000629427 MSNP26038 577 aaKnown RBP14.88□□□□□ -0.03
SHPRH-211ENST00000629427 TAF7LQ5H9L4 462 aa14.88□□□□□ -0.03
SHPRH-211ENST00000629427 IPO8O15397 1037 aaKnown RBP14.88□□□□□ -0.03
SHPRH-211ENST00000629427 GORABQ5T7V8 394 aa14.88□□□□□ -0.03
SHPRH-211ENST00000629427 TNIKQ9UKE5 1360 aa14.87□□□□□ -0.03
SHPRH-211ENST00000629427 L1TD1Q5T7N2 865 aaKnown RBP14.86□□□□□ -0.03
SHPRH-211ENST00000629427 U2AF1L5P0DN76 240 aaPredicted RBP14.85□□□□□ -0.03
SHPRH-211ENST00000629427 U2AF1Q01081 240 aaKnown RBP eCLIP14.85□□□□□ -0.03
SHPRH-211ENST00000629427 CALD1Q05682 793 aaKnown RBP14.85□□□□□ -0.03
SHPRH-211ENST00000629427 FOXD1Q16676 465 aa14.85□□□□□ -0.03
SHPRH-211ENST00000629427 CUX2O14529 1486 aa14.85□□□□□ -0.03
SHPRH-211ENST00000629427 ROCK2O75116 1388 aaKnown RBP14.84□□□□□ -0.03
SHPRH-211ENST00000629427 AMER1Q5JTC6 1135 aaPredicted RBP14.84□□□□□ -0.03
SHPRH-211ENST00000629427 ITPRIPQ8IWB1 547 aa14.84□□□□□ -0.03
SHPRH-211ENST00000629427 PRM3Q9NNZ6 103 aa14.84□□□□□ -0.03
SHPRH-211ENST00000629427 KTN1Q86UP2 1357 aaKnown RBP14.84□□□□□ -0.03
SHPRH-211ENST00000629427 SPAG9O60271 1321 aaKnown RBP14.83□□□□□ -0.04
SHPRH-211ENST00000629427 CARMIL1Q5VZK9 1371 aa14.83□□□□□ -0.04
SHPRH-211ENST00000629427 NOC3LQ8WTT2 800 aaKnown RBP14.82□□□□□ -0.04
SHPRH-211ENST00000629427 ARHGAP35Q9NRY4 1499 aa14.82□□□□□ -0.04
SHPRH-211ENST00000629427 PKD2Q13563 968 aa14.82□□□□□ -0.04
SHPRH-211ENST00000629427 GPATCH3Q96I76 525 aa14.81□□□□□ -0.04
SHPRH-211ENST00000629427 TRIM6-TRIM34B2RNG4 842 aa14.8□□□□□ -0.04
SHPRH-211ENST00000629427 STK31Q9BXU1 1019 aa14.79□□□□□ -0.04
SHPRH-211ENST00000629427 HSP90B1P14625 803 aaKnown RBP14.79□□□□□ -0.04
SHPRH-211ENST00000629427 CARMIL2Q6F5E8 1435 aa14.79□□□□□ -0.04
SHPRH-211ENST00000629427 EID1Q9Y6B2 187 aa14.79□□□□□ -0.04
SHPRH-211ENST00000629427 HSPA5P11021 654 aaKnown RBP14.78□□□□□ -0.04
SHPRH-211ENST00000629427 NGDNQ8NEJ9 315 aaKnown RBP14.77□□□□□ -0.04
SHPRH-211ENST00000629427 BAZ1AQ9NRL2 1556 aaPredicted RBP14.77□□□□□ -0.04
SHPRH-211ENST00000629427 SLC4A10Q6U841 1118 aa14.77□□□□□ -0.05
SHPRH-211ENST00000629427 NUTM2DQ5VT03 806 aaPredicted RBP14.77□□□□□ -0.05
SHPRH-211ENST00000629427 FRAT2O75474 233 aaPredicted RBP14.76□□□□□ -0.05
SHPRH-211ENST00000629427 LTV1Q96GA3 475 aaPredicted RBP14.76□□□□□ -0.05
SHPRH-211ENST00000629427 HTATSF1O43719 755 aaKnown RBP14.76□□□□□ -0.05
SHPRH-211ENST00000629427 PDE4CQ08493 712 aa14.76□□□□□ -0.05
SHPRH-211ENST00000629427 SETD5Q9C0A6 1442 aa14.75□□□□□ -0.05
SHPRH-211ENST00000629427 GTF2E1P29083 439 aaPredicted RBP14.75□□□□□ -0.05
SHPRH-211ENST00000629427 CHMP4AQ9BY43 222 aa14.74□□□□□ -0.05
SHPRH-211ENST00000629427 NUTM2FA1L443 756 aa14.74□□□□□ -0.05
SHPRH-211ENST00000629427 AMPHP49418 695 aa14.74□□□□□ -0.05
SHPRH-211ENST00000629427 CREBRFQ8IUR6 639 aa14.74□□□□□ -0.05
SHPRH-211ENST00000629427 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.74□□□□□ -0.05
SHPRH-211ENST00000629427 GBP4Q96PP9 640 aa14.74□□□□□ -0.05
SHPRH-211ENST00000629427 RWDD1Q9H446 243 aaPredicted RBP14.74□□□□□ -0.05
SHPRH-211ENST00000629427 RASSF8Q8NHQ8 419 aa14.74□□□□□ -0.05
SHPRH-211ENST00000629427 GZF1Q9H116 711 aaPredicted RBP14.73□□□□□ -0.05
SHPRH-211ENST00000629427 EIF3AQ14152 1382 aaKnown RBP14.73□□□□□ -0.05
SHPRH-211ENST00000629427 TPM4P67936 248 aa14.73□□□□□ -0.05
SHPRH-211ENST00000629427 SMC4Q9NTJ3 1288 aa14.73□□□□□ -0.05
SHPRH-211ENST00000629427 VPS53Q5VIR6 699 aa14.73□□□□□ -0.05
SHPRH-211ENST00000629427 RCAN3Q9UKA8 241 aa14.73□□□□□ -0.05
SHPRH-211ENST00000629427 NUP155O75694 1391 aa14.72□□□□□ -0.05
SHPRH-211ENST00000629427 KIF3BO15066 747 aa14.72□□□□□ -0.05
SHPRH-211ENST00000629427 TERF2IPQ9NYB0 399 aa14.72□□□□□ -0.05
SHPRH-211ENST00000629427 EFCAB2Q5VUJ9 269 aa14.71□□□□□ -0.05
SHPRH-211ENST00000629427 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.71□□□□□ -0.055e-7■■□□□ 12
SHPRH-211ENST00000629427 PTMSP20962 102 aa14.7□□□□□ -0.06
SHPRH-211ENST00000629427 TOMM22Q9NS69 142 aa14.7□□□□□ -0.06
SHPRH-211ENST00000629427 CCDC34Q96HJ3 373 aa14.7□□□□□ -0.06
SHPRH-211ENST00000629427 PMFBP1Q8TBY8 1022 aa14.7□□□□□ -0.06
SHPRH-211ENST00000629427 CCDC146Q8IYE0 955 aa14.69□□□□□ -0.06
SHPRH-211ENST00000629427 SYAP1Q96A49 352 aaPredicted RBP14.69□□□□□ -0.06
SHPRH-211ENST00000629427 HDAC5Q9UQL6 1122 aa14.69□□□□□ -0.06
SHPRH-211ENST00000629427 MFAP1P55081 439 aaKnown RBP14.69□□□□□ -0.06
SHPRH-211ENST00000629427 WASHC2CQ9Y4E1 1318 aa14.69□□□□□ -0.06
SHPRH-211ENST00000629427 HMMRO75330 724 aa14.69□□□□□ -0.06
SHPRH-211ENST00000629427 MPHOSPH9Q99550 1183 aa14.69□□□□□ -0.06
SHPRH-211ENST00000629427 SLKQ9H2G2 1235 aaPredicted RBP14.69□□□□□ -0.06
SHPRH-211ENST00000629427 EVA1CP58658 441 aa14.69□□□□□ -0.06
SHPRH-211ENST00000629427 MARCH6O60337 910 aa14.68□□□□□ -0.06
SHPRH-211ENST00000629427 HNRNPMP52272 730 aaKnown RBP eCLIP14.68□□□□□ -0.062e-6■■■■■ 31.6
SHPRH-211ENST00000629427 ANO8Q9HCE9 1232 aaPredicted RBP14.68□□□□□ -0.06
SHPRH-211ENST00000629427 RALBP1Q15311 655 aa14.68□□□□□ -0.06
SHPRH-211ENST00000629427 NOL8Q76FK4 1167 aaKnown RBP14.68□□□□□ -0.06
SHPRH-211ENST00000629427 A0A0U1RQG5 324 aaPredicted RBP14.68□□□□□ -0.06
SHPRH-211ENST00000629427 ANKRD30AQ9BXX3 1397 aa14.67□□□□□ -0.06
SHPRH-211ENST00000629427 CCER2I3L3R5 266 aa14.67□□□□□ -0.06
SHPRH-211ENST00000629427 MSH5O43196 834 aa14.66□□□□□ -0.06
SHPRH-211ENST00000629427 ABCC8Q09428 1581 aa14.65□□□□□ -0.06
SHPRH-211ENST00000629427 ARID3AQ99856 593 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms