RNA–Protein interactions for RNA: ENST00000629009.2

CCDC163-206, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 1,694 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-206ENST00000629009 P3H3Q8IVL6 736 aa13.53□□□□□ -0.24
CCDC163-206ENST00000629009 ABCC2Q92887 1545 aa13.52□□□□□ -0.24
CCDC163-206ENST00000629009 NPM2Q86SE8 214 aaKnown RBP13.5□□□□□ -0.25
CCDC163-206ENST00000629009 ABCA8O94911 1581 aa13.49□□□□□ -0.25
CCDC163-206ENST00000629009 PLB1Q6P1J6 1458 aa13.49□□□□□ -0.25
CCDC163-206ENST00000629009 ARHGAP35Q9NRY4 1499 aa13.49□□□□□ -0.25
CCDC163-206ENST00000629009 COL17A1Q9UMD9 1497 aaPredicted RBP13.49□□□□□ -0.25
CCDC163-206ENST00000629009 FHOD3Q2V2M9 1422 aa13.49□□□□□ -0.25
CCDC163-206ENST00000629009 KDM5BQ9UGL1 1544 aa13.47□□□□□ -0.25
CCDC163-206ENST00000629009 KLHL34Q8N239 644 aa13.47□□□□□ -0.25
CCDC163-206ENST00000629009 ASXL2Q76L83 1435 aa13.46□□□□□ -0.26
CCDC163-206ENST00000629009 FMN1Q68DA7 1419 aa13.45□□□□□ -0.26
CCDC163-206ENST00000629009 CLIP1P30622 1438 aa13.44□□□□□ -0.26
CCDC163-206ENST00000629009 RAPGEF6Q8TEU7 1601 aa13.44□□□□□ -0.26
CCDC163-206ENST00000629009 ECM2O94769 699 aaPredicted RBP13.44□□□□□ -0.26
CCDC163-206ENST00000629009 ATF5Q9Y2D1 282 aaPredicted RBP13.44□□□□□ -0.26
CCDC163-206ENST00000629009 ZCCHC11Q5TAX3 1644 aaKnown RBP13.43□□□□□ -0.26
CCDC163-206ENST00000629009 CEP162Q5TB80 1403 aa13.4□□□□□ -0.26
CCDC163-206ENST00000629009 EPRSP07814 1512 aaKnown RBP13.4□□□□□ -0.26
CCDC163-206ENST00000629009 SPDYE4A6NLX3 237 aa13.4□□□□□ -0.26
CCDC163-206ENST00000629009 ATP10BO94823 1461 aa13.39□□□□□ -0.27
CCDC163-206ENST00000629009 NUP153P49790 1475 aaKnown RBP13.39□□□□□ -0.27
CCDC163-206ENST00000629009 TEX14Q8IWB6 1497 aa13.38□□□□□ -0.27
CCDC163-206ENST00000629009 WDR7Q9Y4E6 1490 aa13.35□□□□□ -0.27
CCDC163-206ENST00000629009 CFAP43Q8NDM7 1665 aa13.35□□□□□ -0.27
CCDC163-206ENST00000629009 HECW1Q76N89 1606 aa13.35□□□□□ -0.27
CCDC163-206ENST00000629009 TRIM26Q12899 539 aaPredicted RBP13.34□□□□□ -0.27
CCDC163-206ENST00000629009 CASKIN1Q8WXD9 1431 aa13.34□□□□□ -0.27
CCDC163-206ENST00000629009 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.33□□□□□ -0.28
CCDC163-206ENST00000629009 HNRNPUL2Q1KMD3 747 aaKnown RBP13.33□□□□□ -0.28
CCDC163-206ENST00000629009 ARID3CA6NKF2 412 aa13.32□□□□□ -0.28
CCDC163-206ENST00000629009 PROM2Q8N271 834 aa13.32□□□□□ -0.28
CCDC163-206ENST00000629009 FBXO41Q8TF61 875 aa13.32□□□□□ -0.28
CCDC163-206ENST00000629009 FYCO1Q9BQS8 1478 aa13.32□□□□□ -0.28
CCDC163-206ENST00000629009 HOXD11P31277 338 aaPredicted RBP13.31□□□□□ -0.28
CCDC163-206ENST00000629009 ATP1B4Q9UN42 357 aaPredicted RBP13.31□□□□□ -0.28
CCDC163-206ENST00000629009 PCF11O94913 1555 aaKnown RBP13.3□□□□□ -0.28
CCDC163-206ENST00000629009 PLEKHD1A6NEE1 506 aa13.3□□□□□ -0.28
CCDC163-206ENST00000629009 CCDC18Q5T9S5 1454 aa13.29□□□□□ -0.28
CCDC163-206ENST00000629009 CDK11AQ9UQ88 783 aaPredicted RBP13.29□□□□□ -0.28
CCDC163-206ENST00000629009 ADAMTSL3P82987 1691 aa13.29□□□□□ -0.28
CCDC163-206ENST00000629009 CDK13Q14004 1512 aaKnown RBP13.28□□□□□ -0.28
CCDC163-206ENST00000629009 KCNH8Q96L42 1107 aa13.27□□□□□ -0.29
CCDC163-206ENST00000629009 MAGI3Q5TCQ9 1506 aa13.26□□□□□ -0.29
CCDC163-206ENST00000629009 APLP2Q06481 763 aa13.26□□□□□ -0.29
CCDC163-206ENST00000629009 VPS8Q8N3P4 1428 aa13.25□□□□□ -0.29
CCDC163-206ENST00000629009 RGL2O15211 777 aa13.24□□□□□ -0.29
CCDC163-206ENST00000629009 LRRIQ1Q96JM4 1722 aa13.24□□□□□ -0.29
CCDC163-206ENST00000629009 ABCA9Q8IUA7 1624 aa13.22□□□□□ -0.29
CCDC163-206ENST00000629009 TROQ12816 1431 aaPredicted RBP13.22□□□□□ -0.29
CCDC163-206ENST00000629009 CD109Q6YHK3 1445 aa13.22□□□□□ -0.29
CCDC163-206ENST00000629009 BCORL1Q5H9F3 1711 aa13.22□□□□□ -0.29
CCDC163-206ENST00000629009 PTPRMP28827 1452 aa13.21□□□□□ -0.3
CCDC163-206ENST00000629009 SPOCK2Q92563 424 aa13.2□□□□□ -0.3
CCDC163-206ENST00000629009 MADDQ8WXG6 1647 aa13.19□□□□□ -0.3
CCDC163-206ENST00000629009 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.18□□□□□ -0.3
CCDC163-206ENST00000629009 CHGAP10645 457 aaKnown RBP13.18□□□□□ -0.3
CCDC163-206ENST00000629009 ARAP3Q8WWN8 1544 aa13.17□□□□□ -0.3
CCDC163-206ENST00000629009 LMTK3Q96Q04 1460 aa13.17□□□□□ -0.3
CCDC163-206ENST00000629009 KIF14Q15058 1648 aa13.17□□□□□ -0.3
CCDC163-206ENST00000629009 HRCP23327 699 aa13.16□□□□□ -0.3
CCDC163-206ENST00000629009 MAP3K1Q13233 1512 aa13.16□□□□□ -0.3
CCDC163-206ENST00000629009 PHLDB1Q86UU1 1377 aa13.16□□□□□ -0.3
CCDC163-206ENST00000629009 RIMS1Q86UR5 1692 aaKnown RBP13.15□□□□□ -0.3
CCDC163-206ENST00000629009 FRMPD1Q5SYB0 1578 aa13.15□□□□□ -0.3
CCDC163-206ENST00000629009 MTUS2Q5JR59 1369 aa13.14□□□□□ -0.31
CCDC163-206ENST00000629009 PELP1Q8IZL8 1130 aaKnown RBP13.14□□□□□ -0.31
CCDC163-206ENST00000629009 TIAM1Q13009 1591 aa13.14□□□□□ -0.31
CCDC163-206ENST00000629009 TTC37Q6PGP7 1564 aa13.14□□□□□ -0.31
CCDC163-206ENST00000629009 NEO1Q92859 1461 aa13.13□□□□□ -0.31
CCDC163-206ENST00000629009 PLCH2O75038 1416 aa13.12□□□□□ -0.31
CCDC163-206ENST00000629009 EHBP1L1Q8N3D4 1523 aa13.12□□□□□ -0.31
CCDC163-206ENST00000629009 CFAP74Q9C0B2 1584 aa13.09□□□□□ -0.31
CCDC163-206ENST00000629009 MYO5CQ9NQX4 1742 aa13.09□□□□□ -0.31
CCDC163-206ENST00000629009 FANCAO15360 1455 aa13.09□□□□□ -0.31
CCDC163-206ENST00000629009 LRRC9Q6ZRR7 1453 aa13.09□□□□□ -0.31
CCDC163-206ENST00000629009 SIGLEC1Q9BZZ2 1709 aa13.09□□□□□ -0.31
CCDC163-206ENST00000629009 BRPF1P55201 1214 aaPredicted RBP13.08□□□□□ -0.31
CCDC163-206ENST00000629009 EFCAB2Q5VUJ9 269 aa13.08□□□□□ -0.31
CCDC163-206ENST00000629009 RICTORQ6R327 1708 aa13.08□□□□□ -0.32
CCDC163-206ENST00000629009 ARHGEF40Q8TER5 1519 aa13.08□□□□□ -0.32
CCDC163-206ENST00000629009 SAMD1Q6SPF0 538 aaPredicted RBP13.08□□□□□ -0.32
CCDC163-206ENST00000629009 AKNAQ7Z591 1439 aa13.07□□□□□ -0.32
CCDC163-206ENST00000629009 PREX2Q70Z35 1606 aa13.06□□□□□ -0.32
CCDC163-206ENST00000629009 SUPT6HQ7KZ85 1726 aaKnown RBP13.05□□□□□ -0.32
CCDC163-206ENST00000629009 CCNB3Q8WWL7 1395 aa13.05□□□□□ -0.32
CCDC163-206ENST00000629009 ARHGAP5Q13017 1502 aa13.05□□□□□ -0.32
CCDC163-206ENST00000629009 GPATCH8Q9UKJ3 1502 aaKnown RBP13.05□□□□□ -0.32
CCDC163-206ENST00000629009 KANK4Q5T7N3 995 aaPredicted RBP13.04□□□□□ -0.32
CCDC163-206ENST00000629009 CDC42BPAQ5VT25 1732 aa13.04□□□□□ -0.32
CCDC163-206ENST00000629009 FER1L4A9Z1Z3 1794 aa13.04□□□□□ -0.32
CCDC163-206ENST00000629009 NCOA2Q15596 1464 aa13.03□□□□□ -0.32
CCDC163-206ENST00000629009 CDC42BPBQ9Y5S2 1711 aa13.03□□□□□ -0.32
CCDC163-206ENST00000629009 DENND4BO75064 1496 aaPredicted RBP13.02□□□□□ -0.32
CCDC163-206ENST00000629009 ILDR2Q71H61 639 aa13.01□□□□□ -0.33
CCDC163-206ENST00000629009 CFDP1Q9UEE9 299 aaPredicted RBP13.01□□□□□ -0.33
CCDC163-206ENST00000629009 SCAPERQ9BY12 1400 aa13.01□□□□□ -0.33
CCDC163-206ENST00000629009 ITSN2Q9NZM3 1697 aa13.01□□□□□ -0.33
CCDC163-206ENST00000629009 ZNF219Q9P2Y4 722 aaPredicted RBP13□□□□□ -0.33
CCDC163-206ENST00000629009 RAPGEF3O95398 923 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms