RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 MAGI2Q86UL8 1455 aa11.13□□□□□ -0.63
LINC00649-220ENST00000628906 RICTORQ6R327 1708 aa11.12□□□□□ -0.63
LINC00649-220ENST00000628906 ABCA8O94911 1581 aa11.12□□□□□ -0.63
LINC00649-220ENST00000628906 KIAA0556O60303 1618 aa11.12□□□□□ -0.63
LINC00649-220ENST00000628906 NCKAP5LQ9HCH0 1330 aa11.1□□□□□ -0.63
LINC00649-220ENST00000628906 TRAPPC8Q9Y2L5 1435 aa11.1□□□□□ -0.63
LINC00649-220ENST00000628906 EFCAB5A4FU69 1503 aa11.1□□□□□ -0.63
LINC00649-220ENST00000628906 ZMYM4Q5VZL5 1548 aa11.1□□□□□ -0.63
LINC00649-220ENST00000628906 ZFYVE16Q7Z3T8 1539 aa11.1□□□□□ -0.63
LINC00649-220ENST00000628906 UPF1Q92900 1129 aaKnown RBP eCLIP11.1□□□□□ -0.63
LINC00649-220ENST00000628906 KIF27Q86VH2 1401 aa11.09□□□□□ -0.63
LINC00649-220ENST00000628906 PKD2Q13563 968 aa11.08□□□□□ -0.64
LINC00649-220ENST00000628906 ATP10BO94823 1461 aa11.07□□□□□ -0.64
LINC00649-220ENST00000628906 ATP10AO60312 1499 aa11.06□□□□□ -0.64
LINC00649-220ENST00000628906 CAMSAP1Q5T5Y3 1602 aa11.06□□□□□ -0.64
LINC00649-220ENST00000628906 PTPRKQ15262 1439 aa11.04□□□□□ -0.64
LINC00649-220ENST00000628906 PPP6R1Q9UPN7 881 aa11.04□□□□□ -0.64
LINC00649-220ENST00000628906 ALKQ9UM73 1620 aa11.02□□□□□ -0.64
LINC00649-220ENST00000628906 C9orf84Q5VXU9 1444 aa11.02□□□□□ -0.64
LINC00649-220ENST00000628906 ADRA2BP18089 450 aa11.02□□□□□ -0.65
LINC00649-220ENST00000628906 HECW1Q76N89 1606 aa11.02□□□□□ -0.65
LINC00649-220ENST00000628906 ARID3CA6NKF2 412 aa11.01□□□□□ -0.65
LINC00649-220ENST00000628906 IFFO2Q5TF58 517 aa11.01□□□□□ -0.65
LINC00649-220ENST00000628906 C3P01024 1663 aa11.01□□□□□ -0.65
LINC00649-220ENST00000628906 PLA2R1Q13018 1463 aa11□□□□□ -0.65
LINC00649-220ENST00000628906 TCOF1Q13428 1488 aaKnown RBP11□□□□□ -0.65
LINC00649-220ENST00000628906 CPS1P31327 1500 aa11□□□□□ -0.65
LINC00649-220ENST00000628906 RAPGEF2Q9Y4G8 1499 aa10.99□□□□□ -0.65
LINC00649-220ENST00000628906 GOLGA3Q08378 1498 aa10.97□□□□□ -0.65
LINC00649-220ENST00000628906 SETD1AO15047 1707 aaKnown RBP10.97□□□□□ -0.65
LINC00649-220ENST00000628906 SHANK2Q9UPX8 1470 aa10.96□□□□□ -0.65
LINC00649-220ENST00000628906 NPATQ14207 1427 aa10.95□□□□□ -0.66
LINC00649-220ENST00000628906 ESF1Q9H501 851 aaKnown RBP10.95□□□□□ -0.66
LINC00649-220ENST00000628906 SCAPERQ9BY12 1400 aa10.94□□□□□ -0.66
LINC00649-220ENST00000628906 FAM9AQ8IZU1 332 aaPredicted RBP10.94□□□□□ -0.66
LINC00649-220ENST00000628906 CFAP74Q9C0B2 1584 aa10.94□□□□□ -0.66
LINC00649-220ENST00000628906 CNTLNQ9NXG0 1405 aa10.91□□□□□ -0.66
LINC00649-220ENST00000628906 AGLP35573 1532 aa10.9□□□□□ -0.66
LINC00649-220ENST00000628906 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.89□□□□□ -0.67
LINC00649-220ENST00000628906 HNRNPUL2Q1KMD3 747 aaKnown RBP10.89□□□□□ -0.67
LINC00649-220ENST00000628906 ZMYM3Q14202 1370 aa10.88□□□□□ -0.67
LINC00649-220ENST00000628906 PLEKHD1A6NEE1 506 aa10.87□□□□□ -0.67
LINC00649-220ENST00000628906 REREQ9P2R6 1566 aa10.86□□□□□ -0.67
LINC00649-220ENST00000628906 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.85□□□□□ -0.67
LINC00649-220ENST00000628906 AFAP1Q8N556 730 aa10.84□□□□□ -0.67
LINC00649-220ENST00000628906 ZNF142P52746 1687 aaPredicted RBP10.84□□□□□ -0.67
LINC00649-220ENST00000628906 PLCH2O75038 1416 aa10.84□□□□□ -0.67
LINC00649-220ENST00000628906 VWDEQ8N2E2 1590 aa10.83□□□□□ -0.68
LINC00649-220ENST00000628906 CEP170BQ9Y4F5 1589 aaPredicted RBP10.83□□□□□ -0.68
LINC00649-220ENST00000628906 TRIM52Q96A61 297 aa10.82□□□□□ -0.68
LINC00649-220ENST00000628906 LRRC7Q96NW7 1537 aa10.82□□□□□ -0.68
LINC00649-220ENST00000628906 FAM135BQ49AJ0 1406 aa10.82□□□□□ -0.68
LINC00649-220ENST00000628906 ZRANB1Q9UGI0 708 aa10.81□□□□□ -0.68
LINC00649-220ENST00000628906 SUPT6HQ7KZ85 1726 aaKnown RBP10.81□□□□□ -0.68
LINC00649-220ENST00000628906 ZNF518AQ6AHZ1 1483 aa10.81□□□□□ -0.68
LINC00649-220ENST00000628906 EFCAB2Q5VUJ9 269 aa10.8□□□□□ -0.68
LINC00649-220ENST00000628906 DIP2CQ9Y2E4 1556 aa10.8□□□□□ -0.68
LINC00649-220ENST00000628906 MROH2AA6NES4 1674 aa10.79□□□□□ -0.68
LINC00649-220ENST00000628906 NEURL4Q96JN8 1562 aa10.79□□□□□ -0.68
LINC00649-220ENST00000628906 ZNF772Q68DY9 489 aaPredicted RBP10.79□□□□□ -0.68
LINC00649-220ENST00000628906 P3H3Q8IVL6 736 aa10.79□□□□□ -0.68
LINC00649-220ENST00000628906 MYO3AQ8NEV4 1616 aa10.79□□□□□ -0.68
LINC00649-220ENST00000628906 KDM5CP41229 1560 aa10.78□□□□□ -0.68
LINC00649-220ENST00000628906 RBM33Q96EV2 1170 aaKnown RBP10.78□□□□□ -0.68
LINC00649-220ENST00000628906 NUP153P49790 1475 aaKnown RBP10.78□□□□□ -0.68
LINC00649-220ENST00000628906 RNF17Q9BXT8 1623 aaKnown RBP10.77□□□□□ -0.68
LINC00649-220ENST00000628906 A2ML1A8K2U0 1454 aa10.77□□□□□ -0.69
LINC00649-220ENST00000628906 MLH3Q9UHC1 1453 aa10.77□□□□□ -0.69
LINC00649-220ENST00000628906 RXRBP28702 533 aa10.77□□□□□ -0.69
LINC00649-220ENST00000628906 ANKLE2Q86XL3 938 aa10.77□□□□□ -0.69
LINC00649-220ENST00000628906 PIAS4Q8N2W9 510 aaPredicted RBP10.77□□□□□ -0.69
LINC00649-220ENST00000628906 MYT1LQ9UL68 1186 aa10.77□□□□□ -0.69
LINC00649-220ENST00000628906 RAPGEF6Q8TEU7 1601 aa10.76□□□□□ -0.69
LINC00649-220ENST00000628906 CDK12Q9NYV4 1490 aaPredicted RBP10.76□□□□□ -0.69
LINC00649-220ENST00000628906 DNMT1P26358 1616 aaKnown RBP10.76□□□□□ -0.69
LINC00649-220ENST00000628906 CTTNBP2Q8WZ74 1663 aa10.76□□□□□ -0.69
LINC00649-220ENST00000628906 MED14O60244 1454 aa10.74□□□□□ -0.69
LINC00649-220ENST00000628906 SETBP1Q9Y6X0 1596 aa10.74□□□□□ -0.69
LINC00649-220ENST00000628906 ABCA6Q8N139 1617 aa10.73□□□□□ -0.69
LINC00649-220ENST00000628906 POLR1AO95602 1720 aaPredicted RBP10.72□□□□□ -0.69
LINC00649-220ENST00000628906 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.72□□□□□ -0.69
LINC00649-220ENST00000628906 STRCP1A6NGW2 1772 aa10.72□□□□□ -0.69
LINC00649-220ENST00000628906 NPHP4O75161 1426 aaPredicted RBP10.71□□□□□ -0.69
LINC00649-220ENST00000628906 JCADQ9P266 1359 aa10.7□□□□□ -0.7
LINC00649-220ENST00000628906 THEMISQ8N1K5 641 aaPredicted RBP10.7□□□□□ -0.7
LINC00649-220ENST00000628906 SYNMO15061 1565 aa10.69□□□□□ -0.7
LINC00649-220ENST00000628906 DEPDC5O75140 1603 aa10.66□□□□□ -0.7
LINC00649-220ENST00000628906 SPATA31A6Q5VVP1 1343 aa10.66□□□□□ -0.7
LINC00649-220ENST00000628906 CDK13Q14004 1512 aaKnown RBP10.66□□□□□ -0.7
LINC00649-220ENST00000628906 CLTCQ00610 1675 aaKnown RBP10.64□□□□□ -0.71
LINC00649-220ENST00000628906 MEX3CQ5U5Q3 659 aaKnown RBP10.64□□□□□ -0.71
LINC00649-220ENST00000628906 LRP6O75581 1613 aa10.64□□□□□ -0.71
LINC00649-220ENST00000628906 ABCC1P33527 1531 aa10.63□□□□□ -0.71
LINC00649-220ENST00000628906 ROBO1Q9Y6N7 1651 aa10.63□□□□□ -0.71
LINC00649-220ENST00000628906 NUTM2BA6NNL0 878 aaPredicted RBP10.62□□□□□ -0.71
LINC00649-220ENST00000628906 NUTM2EB1AL46 878 aaPredicted RBP10.62□□□□□ -0.71
LINC00649-220ENST00000628906 NUTM2DQ5VT03 806 aaPredicted RBP10.62□□□□□ -0.71
LINC00649-220ENST00000628906 NUTM2AQ8IVF1 878 aaPredicted RBP10.62□□□□□ -0.71
LINC00649-220ENST00000628906 XIRP1Q702N8 1843 aaKnown RBP10.62□□□□□ -0.71
LINC00649-220ENST00000628906 KIDINS220Q9ULH0 1771 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms