RNA–Protein interactions for RNA: ENST00000627450.2

PDXDC1-218, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-218ENST00000627450 CAMSAP2Q08AD1 1489 aa20.21■□□□□ 0.83
PDXDC1-218ENST00000627450 HRCP23327 699 aa20.2■□□□□ 0.82
PDXDC1-218ENST00000627450 CDC42BPBQ9Y5S2 1711 aa20.2■□□□□ 0.82
PDXDC1-218ENST00000627450 RRP7BPQ9NSQ0 103 aa20.17■□□□□ 0.82
PDXDC1-218ENST00000627450 PREX2Q70Z35 1606 aa20.16■□□□□ 0.82
PDXDC1-218ENST00000627450 RAB3GAP2Q9H2M9 1393 aa20.16■□□□□ 0.82
PDXDC1-218ENST00000627450 HNRNPMP52272 730 aaKnown RBP eCLIP20.16■□□□□ 0.82
PDXDC1-218ENST00000627450 ARHGAP5Q13017 1502 aa20.15■□□□□ 0.82
PDXDC1-218ENST00000627450 ABCC5O15440 1437 aa20.15■□□□□ 0.82
PDXDC1-218ENST00000627450 DAPK1P53355 1430 aa20.15■□□□□ 0.82
PDXDC1-218ENST00000627450 MYO5CQ9NQX4 1742 aa20.14■□□□□ 0.81
PDXDC1-218ENST00000627450 SETD5Q9C0A6 1442 aa20.13■□□□□ 0.81
PDXDC1-218ENST00000627450 SAMD9LQ8IVG5 1584 aa20.12■□□□□ 0.81
PDXDC1-218ENST00000627450 DNMT1P26358 1616 aaKnown RBP20.12■□□□□ 0.81
PDXDC1-218ENST00000627450 PLCH2O75038 1416 aa20.11■□□□□ 0.81
PDXDC1-218ENST00000627450 NAIPQ13075 1403 aa20.08■□□□□ 0.8
PDXDC1-218ENST00000627450 HFM1A2PYH4 1435 aa20.07■□□□□ 0.8
PDXDC1-218ENST00000627450 ABCA9Q8IUA7 1624 aa20.07■□□□□ 0.8
PDXDC1-218ENST00000627450 EFCAB2Q5VUJ9 269 aa20.06■□□□□ 0.8
PDXDC1-218ENST00000627450 MBD5Q9P267 1494 aa20.06■□□□□ 0.8
PDXDC1-218ENST00000627450 SYCP2Q9BX26 1530 aa20.06■□□□□ 0.8
PDXDC1-218ENST00000627450 DHX57Q6P158 1386 aaKnown RBP20.03■□□□□ 0.8
PDXDC1-218ENST00000627450 MAPKBP1O60336 1514 aa20.03■□□□□ 0.8
PDXDC1-218ENST00000627450 ARHGEF12Q9NZN5 1544 aa20.03■□□□□ 0.8
PDXDC1-218ENST00000627450 AKNAQ7Z591 1439 aa20.03■□□□□ 0.8
PDXDC1-218ENST00000627450 TSPY4P0CV99 314 aa20.01■□□□□ 0.79
PDXDC1-218ENST00000627450 TSPY10P0CW01 314 aa20.01■□□□□ 0.79
PDXDC1-218ENST00000627450 KDM6BO15054 1643 aa20.01■□□□□ 0.79
PDXDC1-218ENST00000627450 FANCAO15360 1455 aa20.01■□□□□ 0.79
PDXDC1-218ENST00000627450 CROCC2H7BZ55 1655 aa20■□□□□ 0.79
PDXDC1-218ENST00000627450 CD109Q6YHK3 1445 aa20■□□□□ 0.79
PDXDC1-218ENST00000627450 NCOA1Q15788 1441 aa19.99■□□□□ 0.79
PDXDC1-218ENST00000627450 C9orf84Q5VXU9 1444 aa19.99■□□□□ 0.79
PDXDC1-218ENST00000627450 CCDC141Q6ZP82 1450 aa19.98■□□□□ 0.79
PDXDC1-218ENST00000627450 ROCK1Q13464 1354 aa19.98■□□□□ 0.79
PDXDC1-218ENST00000627450 ARHGEF5Q12774 1597 aa19.97■□□□□ 0.79
PDXDC1-218ENST00000627450 FAM69CQ0P6D2 419 aa19.97■□□□□ 0.79
PDXDC1-218ENST00000627450 AFAP1Q8N556 730 aa19.97■□□□□ 0.79
PDXDC1-218ENST00000627450 TRAPPC8Q9Y2L5 1435 aa19.96■□□□□ 0.79
PDXDC1-218ENST00000627450 KIAA1107Q9UPP5 1409 aa19.96■□□□□ 0.79
PDXDC1-218ENST00000627450 ABCC1P33527 1531 aa19.96■□□□□ 0.79
PDXDC1-218ENST00000627450 GCC2Q8IWJ2 1684 aa19.95■□□□□ 0.78
PDXDC1-218ENST00000627450 ARAP3Q8WWN8 1544 aa19.95■□□□□ 0.78
PDXDC1-218ENST00000627450 ANKRD30AQ9BXX3 1397 aa19.94■□□□□ 0.78
PDXDC1-218ENST00000627450 PLEKHH2Q8IVE3 1493 aa19.94■□□□□ 0.78
PDXDC1-218ENST00000627450 ADGBQ8N7X0 1667 aa19.93■□□□□ 0.78
PDXDC1-218ENST00000627450 RSPH4AQ5TD94 716 aa19.93■□□□□ 0.78
PDXDC1-218ENST00000627450 ADGRL2O95490 1459 aa19.92■□□□□ 0.78
PDXDC1-218ENST00000627450 SHANK2Q9UPX8 1470 aa19.92■□□□□ 0.78
PDXDC1-218ENST00000627450 ZEB1P37275 1124 aaPredicted RBP19.92■□□□□ 0.78
PDXDC1-218ENST00000627450 TRIM52Q96A61 297 aa19.92■□□□□ 0.78
PDXDC1-218ENST00000627450 ADGRL1O94910 1474 aa19.92■□□□□ 0.78
PDXDC1-218ENST00000627450 SCAPERQ9BY12 1400 aa19.91■□□□□ 0.78
PDXDC1-218ENST00000627450 DIP2BQ9P265 1576 aa19.89■□□□□ 0.78
PDXDC1-218ENST00000627450 KIF15Q9NS87 1388 aa19.89■□□□□ 0.77
PDXDC1-218ENST00000627450 MAP3K4Q9Y6R4 1608 aa19.87■□□□□ 0.77
PDXDC1-218ENST00000627450 ANKRD50Q9ULJ7 1429 aa19.86■□□□□ 0.77
PDXDC1-218ENST00000627450 TSPOAP1O95153 1857 aa19.86■□□□□ 0.77
PDXDC1-218ENST00000627450 SPAG9O60271 1321 aaKnown RBP19.85■□□□□ 0.77
PDXDC1-218ENST00000627450 MYT1LQ9UL68 1186 aa19.85■□□□□ 0.77
PDXDC1-218ENST00000627450 DNAJC5Q9H3Z4 198 aa19.84■□□□□ 0.77
PDXDC1-218ENST00000627450 GLI2P10070 1586 aa19.84■□□□□ 0.77
PDXDC1-218ENST00000627450 RAPGEF3O95398 923 aa19.82■□□□□ 0.76
PDXDC1-218ENST00000627450 MAST1Q9Y2H9 1570 aa19.82■□□□□ 0.76
PDXDC1-218ENST00000627450 SIN3AQ96ST3 1273 aa19.81■□□□□ 0.76
PDXDC1-218ENST00000627450 FOXD1Q16676 465 aa19.8■□□□□ 0.76
PDXDC1-218ENST00000627450 CLSPNQ9HAW4 1339 aa19.79■□□□□ 0.76
PDXDC1-218ENST00000627450 MPHOSPH9Q99550 1183 aa19.79■□□□□ 0.76
PDXDC1-218ENST00000627450 KIF13AQ9H1H9 1805 aa19.79■□□□□ 0.76
PDXDC1-218ENST00000627450 DENND4BO75064 1496 aaPredicted RBP19.78■□□□□ 0.76
PDXDC1-218ENST00000627450 ZFYVE16Q7Z3T8 1539 aa19.78■□□□□ 0.76
PDXDC1-218ENST00000627450 CFAP74Q9C0B2 1584 aa19.78■□□□□ 0.76
PDXDC1-218ENST00000627450 NEO1Q92859 1461 aa19.77■□□□□ 0.76
PDXDC1-218ENST00000627450 NEUROD1Q13562 356 aa19.77■□□□□ 0.76
PDXDC1-218ENST00000627450 ZNF518AQ6AHZ1 1483 aa19.76■□□□□ 0.75
PDXDC1-218ENST00000627450 PLXNC1O60486 1568 aa19.76■□□□□ 0.75
PDXDC1-218ENST00000627450 SLC4A1APQ9BWU0 796 aaKnown RBP19.76■□□□□ 0.75
PDXDC1-218ENST00000627450 POGZQ7Z3K3 1410 aa19.75■□□□□ 0.75
PDXDC1-218ENST00000627450 PPRC1Q5VV67 1664 aaKnown RBP19.75■□□□□ 0.75
PDXDC1-218ENST00000627450 ATP7AQ04656 1500 aa19.75■□□□□ 0.75
PDXDC1-218ENST00000627450 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.74■□□□□ 0.754e-7■■□□□ 12.8
PDXDC1-218ENST00000627450 RTEL1-TNFRSF6BF6WH68 1400 aa19.74■□□□□ 0.75
PDXDC1-218ENST00000627450 NUP155O75694 1391 aa19.73■□□□□ 0.75
PDXDC1-218ENST00000627450 INO80Q9ULG1 1556 aaPredicted RBP19.73■□□□□ 0.75
PDXDC1-218ENST00000627450 PZPP20742 1482 aa19.72■□□□□ 0.75
PDXDC1-218ENST00000627450 KIDINS220Q9ULH0 1771 aa19.71■□□□□ 0.75
PDXDC1-218ENST00000627450 DUOX2Q9NRD8 1548 aa19.71■□□□□ 0.75
PDXDC1-218ENST00000627450 KDM5CP41229 1560 aa19.69■□□□□ 0.74
PDXDC1-218ENST00000627450 TRHP20396 242 aaPredicted RBP19.68■□□□□ 0.74
PDXDC1-218ENST00000627450 PKD2Q13563 968 aa19.67■□□□□ 0.74
PDXDC1-218ENST00000627450 RICTORQ6R327 1708 aa19.67■□□□□ 0.74
PDXDC1-218ENST00000627450 ERBINQ96RT1 1412 aa19.66■□□□□ 0.74
PDXDC1-218ENST00000627450 TEX14Q8IWB6 1497 aa19.66■□□□□ 0.74
PDXDC1-218ENST00000627450 HECW2Q9P2P5 1572 aa19.64■□□□□ 0.74
PDXDC1-218ENST00000627450 KIF3BO15066 747 aa19.64■□□□□ 0.73
PDXDC1-218ENST00000627450 MLH3Q9UHC1 1453 aa19.64■□□□□ 0.73
PDXDC1-218ENST00000627450 COL17A1Q9UMD9 1497 aaPredicted RBP19.63■□□□□ 0.73
PDXDC1-218ENST00000627450 FRMPD1Q5SYB0 1578 aa19.63■□□□□ 0.73
PDXDC1-218ENST00000627450 DHX29Q7Z478 1369 aaKnown RBP19.63■□□□□ 0.73
PDXDC1-218ENST00000627450 ACIN1Q9UKV3 1341 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms