RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 ABCA9Q8IUA7 1624 aa13.24□□□□□ -0.29
SGMS1-211ENST00000626236 MYO5CQ9NQX4 1742 aa13.23□□□□□ -0.29
SGMS1-211ENST00000626236 GLI2P10070 1586 aa13.23□□□□□ -0.29
SGMS1-211ENST00000626236 NCOA2Q15596 1464 aa13.23□□□□□ -0.29
SGMS1-211ENST00000626236 MAP3K4Q9Y6R4 1608 aa13.22□□□□□ -0.29
SGMS1-211ENST00000626236 HOXD11P31277 338 aaPredicted RBP13.22□□□□□ -0.29
SGMS1-211ENST00000626236 CDC42BPAQ5VT25 1732 aa13.22□□□□□ -0.29
SGMS1-211ENST00000626236 ITSN2Q9NZM3 1697 aa13.21□□□□□ -0.3
SGMS1-211ENST00000626236 TSPOAP1O95153 1857 aa13.21□□□□□ -0.3
SGMS1-211ENST00000626236 FAM69CQ0P6D2 419 aa13.2□□□□□ -0.3
SGMS1-211ENST00000626236 PREX2Q70Z35 1606 aa13.19□□□□□ -0.3
SGMS1-211ENST00000626236 CDC42BPBQ9Y5S2 1711 aa13.19□□□□□ -0.3
SGMS1-211ENST00000626236 TRHP20396 242 aaPredicted RBP13.18□□□□□ -0.3
SGMS1-211ENST00000626236 CCNB3Q8WWL7 1395 aa13.18□□□□□ -0.3
SGMS1-211ENST00000626236 CD109Q6YHK3 1445 aa13.16□□□□□ -0.3
SGMS1-211ENST00000626236 PPRC1Q5VV67 1664 aaKnown RBP13.16□□□□□ -0.3
SGMS1-211ENST00000626236 GPATCH8Q9UKJ3 1502 aaKnown RBP13.15□□□□□ -0.3
SGMS1-211ENST00000626236 PHLDB1Q86UU1 1377 aa13.15□□□□□ -0.3
SGMS1-211ENST00000626236 ARHGAP5Q13017 1502 aa13.14□□□□□ -0.31
SGMS1-211ENST00000626236 PLCH2O75038 1416 aa13.13□□□□□ -0.31
SGMS1-211ENST00000626236 MYOM3Q5VTT5 1437 aa13.13□□□□□ -0.31
SGMS1-211ENST00000626236 CFAP74Q9C0B2 1584 aa13.13□□□□□ -0.31
SGMS1-211ENST00000626236 ARAP3Q8WWN8 1544 aa13.13□□□□□ -0.31
SGMS1-211ENST00000626236 PTPN23Q9H3S7 1636 aa13.1□□□□□ -0.31
SGMS1-211ENST00000626236 CFDP1Q9UEE9 299 aaPredicted RBP13.1□□□□□ -0.31
SGMS1-211ENST00000626236 SAMD9LQ8IVG5 1584 aa13.1□□□□□ -0.31
SGMS1-211ENST00000626236 FANCAO15360 1455 aa13.1□□□□□ -0.31
SGMS1-211ENST00000626236 TEX14Q8IWB6 1497 aa13.1□□□□□ -0.31
SGMS1-211ENST00000626236 FGD6Q6ZV73 1430 aa13.09□□□□□ -0.31
SGMS1-211ENST00000626236 MIA2Q96PC5 1412 aa13.08□□□□□ -0.32
SGMS1-211ENST00000626236 ZNF777Q9ULD5 760 aaPredicted RBP13.08□□□□□ -0.32
SGMS1-211ENST00000626236 CAMSAP2Q08AD1 1489 aa13.08□□□□□ -0.32
SGMS1-211ENST00000626236 EFCAB2Q5VUJ9 269 aa13.07□□□□□ -0.32
SGMS1-211ENST00000626236 NEO1Q92859 1461 aa13.06□□□□□ -0.32
SGMS1-211ENST00000626236 ABCC1P33527 1531 aa13.06□□□□□ -0.32
SGMS1-211ENST00000626236 AKNAQ7Z591 1439 aa13.05□□□□□ -0.32
SGMS1-211ENST00000626236 ZNF644Q9H582 1327 aaPredicted RBP13.05□□□□□ -0.32
SGMS1-211ENST00000626236 ADGRL1O94910 1474 aa13.04□□□□□ -0.32
SGMS1-211ENST00000626236 TCOF1Q13428 1488 aaKnown RBP13.04□□□□□ -0.32
SGMS1-211ENST00000626236 SYCP2Q9BX26 1530 aa13.04□□□□□ -0.32
SGMS1-211ENST00000626236 DCAF8L1A6NGE4 600 aa13.04□□□□□ -0.32
SGMS1-211ENST00000626236 RRBP1Q9P2E9 1410 aaKnown RBP13.04□□□□□ -0.32
SGMS1-211ENST00000626236 PLEKHH2Q8IVE3 1493 aa13.03□□□□□ -0.32
SGMS1-211ENST00000626236 FAM50AQ14320 339 aaKnown RBP13.02□□□□□ -0.33
SGMS1-211ENST00000626236 SCAPERQ9BY12 1400 aa13.01□□□□□ -0.33
SGMS1-211ENST00000626236 ARHGEF12Q9NZN5 1544 aa13.01□□□□□ -0.33
SGMS1-211ENST00000626236 CROCC2H7BZ55 1655 aa13.01□□□□□ -0.33
SGMS1-211ENST00000626236 RICTORQ6R327 1708 aa13.01□□□□□ -0.33
SGMS1-211ENST00000626236 DNMT1P26358 1616 aaKnown RBP13□□□□□ -0.33
SGMS1-211ENST00000626236 ARHGEF5Q12774 1597 aa13□□□□□ -0.33
SGMS1-211ENST00000626236 HNRNPMP52272 730 aaKnown RBP eCLIP13□□□□□ -0.33
SGMS1-211ENST00000626236 KDM6BO15054 1643 aa12.99□□□□□ -0.33
SGMS1-211ENST00000626236 KIAA1107Q9UPP5 1409 aa12.99□□□□□ -0.33
SGMS1-211ENST00000626236 FRMPD1Q5SYB0 1578 aa12.98□□□□□ -0.33
SGMS1-211ENST00000626236 DENND4BO75064 1496 aaPredicted RBP12.98□□□□□ -0.33
SGMS1-211ENST00000626236 MBD5Q9P267 1494 aa12.98□□□□□ -0.33
SGMS1-211ENST00000626236 POGZQ7Z3K3 1410 aa12.97□□□□□ -0.33
SGMS1-211ENST00000626236 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.97□□□□□ -0.33
SGMS1-211ENST00000626236 ZNF518AQ6AHZ1 1483 aa12.97□□□□□ -0.33
SGMS1-211ENST00000626236 CCDC141Q6ZP82 1450 aa12.97□□□□□ -0.33
SGMS1-211ENST00000626236 TRAPPC8Q9Y2L5 1435 aa12.96□□□□□ -0.33
SGMS1-211ENST00000626236 DAPK1P53355 1430 aa12.96□□□□□ -0.34
SGMS1-211ENST00000626236 ADGBQ8N7X0 1667 aa12.96□□□□□ -0.34
SGMS1-211ENST00000626236 KDM5CP41229 1560 aa12.95□□□□□ -0.34
SGMS1-211ENST00000626236 RAPGEF3O95398 923 aa12.95□□□□□ -0.34
SGMS1-211ENST00000626236 ITGAEP38570 1179 aa12.95□□□□□ -0.34
SGMS1-211ENST00000626236 COL17A1Q9UMD9 1497 aaPredicted RBP12.95□□□□□ -0.34
SGMS1-211ENST00000626236 AFAP1Q8N556 730 aa12.94□□□□□ -0.34
SGMS1-211ENST00000626236 ABCC5O15440 1437 aa12.94□□□□□ -0.34
SGMS1-211ENST00000626236 HECW2Q9P2P5 1572 aa12.94□□□□□ -0.34
SGMS1-211ENST00000626236 RSPH4AQ5TD94 716 aa12.93□□□□□ -0.34
SGMS1-211ENST00000626236 INO80Q9ULG1 1556 aaPredicted RBP12.93□□□□□ -0.34
SGMS1-211ENST00000626236 MAST1Q9Y2H9 1570 aa12.93□□□□□ -0.34
SGMS1-211ENST00000626236 SHANK2Q9UPX8 1470 aa12.92□□□□□ -0.34
SGMS1-211ENST00000626236 SLC4A1APQ9BWU0 796 aaKnown RBP12.92□□□□□ -0.34
SGMS1-211ENST00000626236 ZMYM4Q5VZL5 1548 aa12.92□□□□□ -0.34
SGMS1-211ENST00000626236 ZFYVE16Q7Z3T8 1539 aa12.92□□□□□ -0.34
SGMS1-211ENST00000626236 KIDINS220Q9ULH0 1771 aa12.92□□□□□ -0.34
SGMS1-211ENST00000626236 C9orf84Q5VXU9 1444 aa12.91□□□□□ -0.34
SGMS1-211ENST00000626236 TSPY4P0CV99 314 aa12.91□□□□□ -0.34
SGMS1-211ENST00000626236 TSPY10P0CW01 314 aa12.91□□□□□ -0.34
SGMS1-211ENST00000626236 TRIM26Q12899 539 aaPredicted RBP12.91□□□□□ -0.34
SGMS1-211ENST00000626236 ATP7AQ04656 1500 aa12.91□□□□□ -0.34
SGMS1-211ENST00000626236 SPAG9O60271 1321 aaKnown RBP12.9□□□□□ -0.34
SGMS1-211ENST00000626236 PTPRKQ15262 1439 aa12.9□□□□□ -0.34
SGMS1-211ENST00000626236 MYT1LQ9UL68 1186 aa12.9□□□□□ -0.34
SGMS1-211ENST00000626236 ABCA6Q8N139 1617 aa12.89□□□□□ -0.35
SGMS1-211ENST00000626236 CHIC2Q9UKJ5 165 aa12.89□□□□□ -0.35
SGMS1-211ENST00000626236 MLH3Q9UHC1 1453 aa12.89□□□□□ -0.35
SGMS1-211ENST00000626236 PLXNC1O60486 1568 aa12.89□□□□□ -0.35
SGMS1-211ENST00000626236 DIP2CQ9Y2E4 1556 aa12.87□□□□□ -0.35
SGMS1-211ENST00000626236 ARHGEF40Q8TER5 1519 aa12.87□□□□□ -0.35
SGMS1-211ENST00000626236 RTEL1-TNFRSF6BF6WH68 1400 aa12.87□□□□□ -0.35
SGMS1-211ENST00000626236 ADGRL2O95490 1459 aa12.86□□□□□ -0.35
SGMS1-211ENST00000626236 MAGI2Q86UL8 1455 aa12.86□□□□□ -0.35
SGMS1-211ENST00000626236 GCC2Q8IWJ2 1684 aa12.86□□□□□ -0.35
SGMS1-211ENST00000626236 ANKRD30AQ9BXX3 1397 aa12.85□□□□□ -0.35
SGMS1-211ENST00000626236 YEATS2Q9ULM3 1422 aa12.85□□□□□ -0.35
SGMS1-211ENST00000626236 ROCK1Q13464 1354 aa12.83□□□□□ -0.36
SGMS1-211ENST00000626236 NCOA1Q15788 1441 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms