RNA–Protein interactions for RNA: ENST00000625990.2

CHD2-206, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-206ENST00000625990 LRRIQ1Q96JM4 1722 aa14.63□□□□□ -0.07
CHD2-206ENST00000625990 ARAP3Q8WWN8 1544 aa14.63□□□□□ -0.07
CHD2-206ENST00000625990 PLEKHD1A6NEE1 506 aa14.63□□□□□ -0.07
CHD2-206ENST00000625990 RNF39Q9H2S5 420 aa14.61□□□□□ -0.07
CHD2-206ENST00000625990 KIF14Q15058 1648 aa14.61□□□□□ -0.07
CHD2-206ENST00000625990 PCF11O94913 1555 aaKnown RBP14.59□□□□□ -0.07
CHD2-206ENST00000625990 HECW1Q76N89 1606 aa14.59□□□□□ -0.07
CHD2-206ENST00000625990 NEO1Q92859 1461 aa14.58□□□□□ -0.08
CHD2-206ENST00000625990 FANCAO15360 1455 aa14.57□□□□□ -0.08
CHD2-206ENST00000625990 FMN1Q68DA7 1419 aa14.57□□□□□ -0.08
CHD2-206ENST00000625990 AKNAQ7Z591 1439 aa14.57□□□□□ -0.08
CHD2-206ENST00000625990 SIGLEC1Q9BZZ2 1709 aa14.56□□□□□ -0.08
CHD2-206ENST00000625990 SAMD1Q6SPF0 538 aaPredicted RBP14.54□□□□□ -0.08
CHD2-206ENST00000625990 YEATS2Q9ULM3 1422 aa14.54□□□□□ -0.08
CHD2-206ENST00000625990 HECW2Q9P2P5 1572 aa14.54□□□□□ -0.08
CHD2-206ENST00000625990 RICTORQ6R327 1708 aa14.54□□□□□ -0.08
CHD2-206ENST00000625990 DENND4BO75064 1496 aaPredicted RBP14.52□□□□□ -0.08
CHD2-206ENST00000625990 ARID4BQ4LE39 1312 aaPredicted RBP14.52□□□□□ -0.08
CHD2-206ENST00000625990 ATXN8OSP0DMR3 200 aa14.52□□□□□ -0.09
CHD2-206ENST00000625990 ARHGEF40Q8TER5 1519 aa14.51□□□□□ -0.09
CHD2-206ENST00000625990 PLCH2O75038 1416 aa14.49□□□□□ -0.09
CHD2-206ENST00000625990 CLIP1P30622 1438 aa14.49□□□□□ -0.09
CHD2-206ENST00000625990 SCAPERQ9BY12 1400 aa14.49□□□□□ -0.09
CHD2-206ENST00000625990 MADDQ8WXG6 1647 aa14.49□□□□□ -0.09
CHD2-206ENST00000625990 TROQ12816 1431 aaPredicted RBP14.49□□□□□ -0.09
CHD2-206ENST00000625990 PHLDB1Q86UU1 1377 aa14.48□□□□□ -0.09
CHD2-206ENST00000625990 MLECQ14165 292 aa14.48□□□□□ -0.09
CHD2-206ENST00000625990 ADAMTSL3P82987 1691 aa14.48□□□□□ -0.09
CHD2-206ENST00000625990 CASKIN1Q8WXD9 1431 aa14.48□□□□□ -0.09
CHD2-206ENST00000625990 MYO5CQ9NQX4 1742 aa14.47□□□□□ -0.09
CHD2-206ENST00000625990 CFAP74Q9C0B2 1584 aa14.47□□□□□ -0.09
CHD2-206ENST00000625990 BCORL1Q5H9F3 1711 aa14.46□□□□□ -0.09
CHD2-206ENST00000625990 ARHGAP5Q13017 1502 aa14.46□□□□□ -0.09
CHD2-206ENST00000625990 ZFYVE16Q7Z3T8 1539 aa14.46□□□□□ -0.09
CHD2-206ENST00000625990 PTPRMP28827 1452 aa14.46□□□□□ -0.09
CHD2-206ENST00000625990 POGZQ7Z3K3 1410 aa14.46□□□□□ -0.09
CHD2-206ENST00000625990 AFAP1Q8N556 730 aa14.44□□□□□ -0.1
CHD2-206ENST00000625990 RIMS1Q86UR5 1692 aaKnown RBP14.44□□□□□ -0.1
CHD2-206ENST00000625990 ZMYM4Q5VZL5 1548 aa14.44□□□□□ -0.1
CHD2-206ENST00000625990 ARHGEF12Q9NZN5 1544 aa14.43□□□□□ -0.1
CHD2-206ENST00000625990 C1QBPQ07021 282 aaKnown RBP14.43□□□□□ -0.1
CHD2-206ENST00000625990 CDC42BPBQ9Y5S2 1711 aa14.43□□□□□ -0.1
CHD2-206ENST00000625990 LOC105371045A0A1W2PR82 267 aa14.42□□□□□ -0.1
CHD2-206ENST00000625990 CDK11AQ9UQ88 783 aaPredicted RBP14.42□□□□□ -0.1
CHD2-206ENST00000625990 EFCAB2Q5VUJ9 269 aa14.41□□□□□ -0.1
CHD2-206ENST00000625990 FYCO1Q9BQS8 1478 aa14.41□□□□□ -0.1
CHD2-206ENST00000625990 ATF5Q9Y2D1 282 aaPredicted RBP14.4□□□□□ -0.1
CHD2-206ENST00000625990 TRAPPC8Q9Y2L5 1435 aa14.4□□□□□ -0.1
CHD2-206ENST00000625990 CCDC18Q5T9S5 1454 aa14.39□□□□□ -0.11
CHD2-206ENST00000625990 ZNF777Q9ULD5 760 aaPredicted RBP14.39□□□□□ -0.11
CHD2-206ENST00000625990 PREX2Q70Z35 1606 aa14.39□□□□□ -0.11
CHD2-206ENST00000625990 APLP2Q06481 763 aa14.38□□□□□ -0.11
CHD2-206ENST00000625990 CEP162Q5TB80 1403 aa14.38□□□□□ -0.11
CHD2-206ENST00000625990 CDC42BPAQ5VT25 1732 aa14.38□□□□□ -0.11
CHD2-206ENST00000625990 MYT1LQ9UL68 1186 aa14.37□□□□□ -0.11
CHD2-206ENST00000625990 ABCC1P33527 1531 aa14.36□□□□□ -0.11
CHD2-206ENST00000625990 ABCA6Q8N139 1617 aa14.36□□□□□ -0.11
CHD2-206ENST00000625990 CEBPAP49715 358 aaPredicted RBP14.35□□□□□ -0.11
CHD2-206ENST00000625990 HSPA2P54652 639 aa14.35□□□□□ -0.11
CHD2-206ENST00000625990 KDM5CP41229 1560 aa14.34□□□□□ -0.11
CHD2-206ENST00000625990 SAMD9LQ8IVG5 1584 aa14.34□□□□□ -0.11
CHD2-206ENST00000625990 DIP2CQ9Y2E4 1556 aa14.34□□□□□ -0.11
CHD2-206ENST00000625990 ITSN2Q9NZM3 1697 aa14.34□□□□□ -0.11
CHD2-206ENST00000625990 ATP10AO60312 1499 aa14.34□□□□□ -0.11
CHD2-206ENST00000625990 ILDR1Q86SU0 546 aaPredicted RBP14.34□□□□□ -0.11
CHD2-206ENST00000625990 C9orf84Q5VXU9 1444 aa14.33□□□□□ -0.11
CHD2-206ENST00000625990 ZNF518AQ6AHZ1 1483 aa14.33□□□□□ -0.12
CHD2-206ENST00000625990 MAGI2Q86UL8 1455 aa14.33□□□□□ -0.12
CHD2-206ENST00000625990 LMTK3Q96Q04 1460 aa14.33□□□□□ -0.12
CHD2-206ENST00000625990 SYCP2Q9BX26 1530 aa14.33□□□□□ -0.12
CHD2-206ENST00000625990 GPATCH8Q9UKJ3 1502 aaKnown RBP14.33□□□□□ -0.12
CHD2-206ENST00000625990 FER1L4A9Z1Z3 1794 aa14.32□□□□□ -0.12
CHD2-206ENST00000625990 HNRNPMP52272 730 aaKnown RBP eCLIP14.32□□□□□ -0.121e-9■■■■■ 30.2
CHD2-206ENST00000625990 ZNF644Q9H582 1327 aaPredicted RBP14.32□□□□□ -0.12
CHD2-206ENST00000625990 MTUS2Q5JR59 1369 aa14.28□□□□□ -0.12
CHD2-206ENST00000625990 SPINK5Q9NQ38 1064 aaPredicted RBP14.28□□□□□ -0.12
CHD2-206ENST00000625990 KIDINS220Q9ULH0 1771 aa14.28□□□□□ -0.12
CHD2-206ENST00000625990 TIAM1Q13009 1591 aa14.27□□□□□ -0.12
CHD2-206ENST00000625990 CCNB3Q8WWL7 1395 aa14.26□□□□□ -0.13
CHD2-206ENST00000625990 MLH3Q9UHC1 1453 aa14.25□□□□□ -0.13
CHD2-206ENST00000625990 CFDP1Q9UEE9 299 aaPredicted RBP14.25□□□□□ -0.13
CHD2-206ENST00000625990 EHBP1L1Q8N3D4 1523 aa14.22□□□□□ -0.13
CHD2-206ENST00000625990 SPAG9O60271 1321 aaKnown RBP14.21□□□□□ -0.13
CHD2-206ENST00000625990 SUPT6HQ7KZ85 1726 aaKnown RBP14.21□□□□□ -0.14
CHD2-206ENST00000625990 KANK4Q5T7N3 995 aaPredicted RBP14.2□□□□□ -0.14
CHD2-206ENST00000625990 INO80Q9ULG1 1556 aaPredicted RBP14.2□□□□□ -0.14
CHD2-206ENST00000625990 ATP7AQ04656 1500 aa14.2□□□□□ -0.14
CHD2-206ENST00000625990 NCOA2Q15596 1464 aa14.19□□□□□ -0.14
CHD2-206ENST00000625990 REREQ9P2R6 1566 aa14.19□□□□□ -0.14
CHD2-206ENST00000625990 CAPN15O75808 1086 aa14.19□□□□□ -0.14
CHD2-206ENST00000625990 C3P01024 1663 aa14.19□□□□□ -0.14
CHD2-206ENST00000625990 ZNF219Q9P2Y4 722 aaPredicted RBP14.18□□□□□ -0.14
CHD2-206ENST00000625990 VPS8Q8N3P4 1428 aa14.17□□□□□ -0.14
CHD2-206ENST00000625990 MBD5Q9P267 1494 aa14.17□□□□□ -0.14
CHD2-206ENST00000625990 AGLP35573 1532 aa14.16□□□□□ -0.14
CHD2-206ENST00000625990 CAMSAP2Q08AD1 1489 aa14.15□□□□□ -0.14
CHD2-206ENST00000625990 KIAA1107Q9UPP5 1409 aa14.15□□□□□ -0.14
CHD2-206ENST00000625990 PREX1Q8TCU6 1659 aa14.14□□□□□ -0.15
CHD2-206ENST00000625990 PLXNC1O60486 1568 aa14.14□□□□□ -0.15
CHD2-206ENST00000625990 A2MP01023 1474 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms