RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 NAIPQ13075 1403 aa28.92■■■□□ 2.22
TREX1-205ENST00000625293 KCNH8Q96L42 1107 aa28.92■■■□□ 2.22
TREX1-205ENST00000625293 AKNAQ7Z591 1439 aa28.9■■■□□ 2.22
TREX1-205ENST00000625293 KIF14Q15058 1648 aa28.87■■■□□ 2.21
TREX1-205ENST00000625293 WDR7Q9Y4E6 1490 aa28.84■■■□□ 2.21
TREX1-205ENST00000625293 GPATCH8Q9UKJ3 1502 aaKnown RBP28.84■■■□□ 2.21
TREX1-205ENST00000625293 ITSN2Q9NZM3 1697 aa28.82■■■□□ 2.2
TREX1-205ENST00000625293 GCC2Q8IWJ2 1684 aa28.81■■■□□ 2.2
TREX1-205ENST00000625293 ZNF316A6NFI3 1004 aaPredicted RBP28.81■■■□□ 2.2
TREX1-205ENST00000625293 DNMT1P26358 1616 aaKnown RBP28.81■■■□□ 2.2
TREX1-205ENST00000625293 TSPOAP1O95153 1857 aa28.79■■■□□ 2.2
TREX1-205ENST00000625293 DAPK1P53355 1430 aa28.79■■■□□ 2.2
TREX1-205ENST00000625293 PLEKHD1A6NEE1 506 aa28.79■■■□□ 2.2
TREX1-205ENST00000625293 ABCC5O15440 1437 aa28.77■■■□□ 2.2
TREX1-205ENST00000625293 ZNF644Q9H582 1327 aaPredicted RBP28.75■■■□□ 2.19
TREX1-205ENST00000625293 CAMSAP2Q08AD1 1489 aa28.74■■■□□ 2.19
TREX1-205ENST00000625293 ROCK1Q13464 1354 aa28.74■■■□□ 2.19
TREX1-205ENST00000625293 GLI2P10070 1586 aa28.74■■■□□ 2.19
TREX1-205ENST00000625293 CHIC2Q9UKJ5 165 aa28.71■■■□□ 2.19
TREX1-205ENST00000625293 CFDP1Q9UEE9 299 aaPredicted RBP28.7■■■□□ 2.19
TREX1-205ENST00000625293 RRP7BPQ9NSQ0 103 aa28.7■■■□□ 2.18
TREX1-205ENST00000625293 CDC42BPAQ5VT25 1732 aa28.68■■■□□ 2.18
TREX1-205ENST00000625293 KDM6BO15054 1643 aa28.66■■■□□ 2.18
TREX1-205ENST00000625293 DIEXFQ68CQ4 756 aaKnown RBP28.65■■■□□ 2.18
TREX1-205ENST00000625293 PPRC1Q5VV67 1664 aaKnown RBP28.65■■■□□ 2.18
TREX1-205ENST00000625293 MAP3K4Q9Y6R4 1608 aa28.64■■■□□ 2.18
TREX1-205ENST00000625293 CD109Q6YHK3 1445 aa28.63■■■□□ 2.17
TREX1-205ENST00000625293 SIN3AQ96ST3 1273 aa28.62■■■□□ 2.17
TREX1-205ENST00000625293 TIMELESSQ9UNS1 1208 aa28.6■■■□□ 2.17
TREX1-205ENST00000625293 ADGRL2O95490 1459 aa28.59■■■□□ 2.17
TREX1-205ENST00000625293 CROCC2H7BZ55 1655 aa28.59■■■□□ 2.17
TREX1-205ENST00000625293 DENND4BO75064 1496 aaPredicted RBP28.56■■■□□ 2.16
TREX1-205ENST00000625293 ADGBQ8N7X0 1667 aa28.54■■■□□ 2.16
TREX1-205ENST00000625293 ACIN1Q9UKV3 1341 aaKnown RBP28.54■■■□□ 2.16
TREX1-205ENST00000625293 NCOA1Q15788 1441 aa28.53■■■□□ 2.16
TREX1-205ENST00000625293 PREX2Q70Z35 1606 aa28.53■■■□□ 2.16
TREX1-205ENST00000625293 ZNF777Q9ULD5 760 aaPredicted RBP28.52■■■□□ 2.16
TREX1-205ENST00000625293 SHANK2Q9UPX8 1470 aa28.52■■■□□ 2.16
TREX1-205ENST00000625293 ABCA9Q8IUA7 1624 aa28.51■■■□□ 2.15
TREX1-205ENST00000625293 COL17A1Q9UMD9 1497 aaPredicted RBP28.51■■■□□ 2.15
TREX1-205ENST00000625293 NEUROD1Q13562 356 aa28.5■■■□□ 2.15
TREX1-205ENST00000625293 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.49■■■□□ 2.15
TREX1-205ENST00000625293 ARHGEF5Q12774 1597 aa28.48■■■□□ 2.15
TREX1-205ENST00000625293 TTC37Q6PGP7 1564 aa28.48■■■□□ 2.15
TREX1-205ENST00000625293 CDC42BPBQ9Y5S2 1711 aa28.47■■■□□ 2.15
TREX1-205ENST00000625293 TEX14Q8IWB6 1497 aa28.46■■■□□ 2.15
TREX1-205ENST00000625293 MBD5Q9P267 1494 aa28.46■■■□□ 2.15
TREX1-205ENST00000625293 SAMD9LQ8IVG5 1584 aa28.45■■■□□ 2.15
TREX1-205ENST00000625293 TRIM52Q96A61 297 aa28.43■■■□□ 2.14
TREX1-205ENST00000625293 ANKRD30AQ9BXX3 1397 aa28.42■■■□□ 2.14
TREX1-205ENST00000625293 MPHOSPH9Q99550 1183 aa28.42■■■□□ 2.14
TREX1-205ENST00000625293 C9orf84Q5VXU9 1444 aa28.41■■■□□ 2.14
TREX1-205ENST00000625293 PPP1R15AO75807 674 aaPredicted RBP28.39■■■□□ 2.13
TREX1-205ENST00000625293 CCDC141Q6ZP82 1450 aa28.35■■■□□ 2.13
TREX1-205ENST00000625293 TONSLQ96HA7 1378 aa28.35■■■□□ 2.13
TREX1-205ENST00000625293 MYO5CQ9NQX4 1742 aa28.35■■■□□ 2.13
TREX1-205ENST00000625293 ARHGAP5Q13017 1502 aa28.34■■■□□ 2.13
TREX1-205ENST00000625293 PZPP20742 1482 aa28.33■■■□□ 2.13
TREX1-205ENST00000625293 HNRNPMP52272 730 aaKnown RBP eCLIP28.32■■■□□ 2.12
TREX1-205ENST00000625293 ANKRD50Q9ULJ7 1429 aa28.32■■■□□ 2.12
TREX1-205ENST00000625293 RSPH4AQ5TD94 716 aa28.32■■■□□ 2.12
TREX1-205ENST00000625293 PLCH2O75038 1416 aa28.31■■■□□ 2.12
TREX1-205ENST00000625293 RAPGEF3O95398 923 aa28.31■■■□□ 2.12
TREX1-205ENST00000625293 KIAA1107Q9UPP5 1409 aa28.3■■■□□ 2.12
TREX1-205ENST00000625293 TSPY4P0CV99 314 aa28.29■■■□□ 2.12
TREX1-205ENST00000625293 TSPY10P0CW01 314 aa28.29■■■□□ 2.12
TREX1-205ENST00000625293 SYCP2Q9BX26 1530 aa28.29■■■□□ 2.12
TREX1-205ENST00000625293 FANCAO15360 1455 aa28.29■■■□□ 2.12
TREX1-205ENST00000625293 ANKRD30BQ9BXX2 1392 aa28.29■■■□□ 2.12
TREX1-205ENST00000625293 PLEKHH2Q8IVE3 1493 aa28.28■■■□□ 2.12
TREX1-205ENST00000625293 MAST1Q9Y2H9 1570 aa28.28■■■□□ 2.12
TREX1-205ENST00000625293 NEO1Q92859 1461 aa28.26■■■□□ 2.11
TREX1-205ENST00000625293 ARAP3Q8WWN8 1544 aa28.24■■■□□ 2.11
TREX1-205ENST00000625293 KIF15Q9NS87 1388 aa28.23■■■□□ 2.11
TREX1-205ENST00000625293 EFCAB2Q5VUJ9 269 aa28.23■■■□□ 2.11
TREX1-205ENST00000625293 SLC4A1APQ9BWU0 796 aaKnown RBP28.22■■■□□ 2.11
TREX1-205ENST00000625293 KDM5DQ9BY66 1539 aa28.21■■■□□ 2.11
TREX1-205ENST00000625293 ARHGEF12Q9NZN5 1544 aa28.2■■■□□ 2.11
TREX1-205ENST00000625293 FOXD1Q16676 465 aa28.2■■■□□ 2.11
TREX1-205ENST00000625293 RPRD2Q5VT52 1461 aaKnown RBP28.19■■■□□ 2.1
TREX1-205ENST00000625293 ABCC1P33527 1531 aa28.17■■■□□ 2.1
TREX1-205ENST00000625293 SCAPERQ9BY12 1400 aa28.15■■■□□ 2.1
TREX1-205ENST00000625293 PLXNC1O60486 1568 aa28.14■■■□□ 2.1
TREX1-205ENST00000625293 MIER1Q8N108 512 aa28.14■■■□□ 2.1
TREX1-205ENST00000625293 ADGRL1O94910 1474 aa28.13■■■□□ 2.09
TREX1-205ENST00000625293 FRMPD1Q5SYB0 1578 aa28.12■■■□□ 2.09
TREX1-205ENST00000625293 CFAP74Q9C0B2 1584 aa28.1■■■□□ 2.09
TREX1-205ENST00000625293 NUP155O75694 1391 aa28.09■■■□□ 2.09
TREX1-205ENST00000625293 AFAP1Q8N556 730 aa28.09■■■□□ 2.09
TREX1-205ENST00000625293 L3MBTL2Q969R5 705 aa28.06■■■□□ 2.08
TREX1-205ENST00000625293 RICTORQ6R327 1708 aa28.05■■■□□ 2.08
TREX1-205ENST00000625293 PKD2Q13563 968 aa28.05■■■□□ 2.08
TREX1-205ENST00000625293 TRAPPC8Q9Y2L5 1435 aa28.05■■■□□ 2.08
TREX1-205ENST00000625293 UNC13BO14795 1591 aa28.03■■■□□ 2.08
TREX1-205ENST00000625293 DUOX2Q9NRD8 1548 aa28.02■■■□□ 2.08
TREX1-205ENST00000625293 POGZQ7Z3K3 1410 aa28.02■■■□□ 2.08
TREX1-205ENST00000625293 FAM135AQ9P2D6 1515 aa27.99■■■□□ 2.07
TREX1-205ENST00000625293 ERBINQ96RT1 1412 aa27.98■■■□□ 2.07
TREX1-205ENST00000625293 YEATS2Q9ULM3 1422 aa27.98■■■□□ 2.07
TREX1-205ENST00000625293 KDM4FA0A1W2PPD8 638 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms