RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 PLB1Q6P1J6 1458 aa15.68■□□□□ 0.1
ATRX-216ENST00000624403 REM2Q8IYK8 340 aaPredicted RBP15.68■□□□□ 0.1
ATRX-216ENST00000624403 EHBP1L1Q8N3D4 1523 aa15.68■□□□□ 0.1
ATRX-216ENST00000624403 ARID3CA6NKF2 412 aa15.67■□□□□ 0.1
ATRX-216ENST00000624403 MAGI3Q5TCQ9 1506 aa15.67■□□□□ 0.1
ATRX-216ENST00000624403 CCNB3Q8WWL7 1395 aa15.66■□□□□ 0.1
ATRX-216ENST00000624403 PTPRGP23470 1445 aa15.65■□□□□ 0.1
ATRX-216ENST00000624403 ABCA8O94911 1581 aa15.65■□□□□ 0.1
ATRX-216ENST00000624403 ERCC6L2Q5T890 1561 aa15.64■□□□□ 0.09
ATRX-216ENST00000624403 CHRDL2Q6WN34 429 aa15.64■□□□□ 0.09
ATRX-216ENST00000624403 NCOA2Q15596 1464 aa15.62■□□□□ 0.09
ATRX-216ENST00000624403 SUPT6HQ7KZ85 1726 aaKnown RBP15.61■□□□□ 0.09
ATRX-216ENST00000624403 ARHGEF11O15085 1522 aa15.6■□□□□ 0.09
ATRX-216ENST00000624403 ZNF692Q9BU19 519 aaPredicted RBP15.6■□□□□ 0.09
ATRX-216ENST00000624403 CDK11AQ9UQ88 783 aaPredicted RBP15.57■□□□□ 0.08
ATRX-216ENST00000624403 FGD6Q6ZV73 1430 aa15.57■□□□□ 0.08
ATRX-216ENST00000624403 MYOM3Q5VTT5 1437 aa15.56■□□□□ 0.08
ATRX-216ENST00000624403 UACAQ9BZF9 1416 aa15.56■□□□□ 0.08
ATRX-216ENST00000624403 ATP10BO94823 1461 aa15.55■□□□□ 0.08
ATRX-216ENST00000624403 FAM50AQ14320 339 aaKnown RBP15.55■□□□□ 0.08
ATRX-216ENST00000624403 TROQ12816 1431 aaPredicted RBP15.54■□□□□ 0.08
ATRX-216ENST00000624403 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.54■□□□□ 0.08
ATRX-216ENST00000624403 ITGAEP38570 1179 aa15.53■□□□□ 0.08
ATRX-216ENST00000624403 SSUH2Q9Y2M2 353 aa15.53■□□□□ 0.08
ATRX-216ENST00000624403 PITPNM1O00562 1244 aa15.51■□□□□ 0.07
ATRX-216ENST00000624403 ABCC2Q92887 1545 aa15.5■□□□□ 0.07
ATRX-216ENST00000624403 CCER1Q8TC90 406 aaPredicted RBP15.5■□□□□ 0.07
ATRX-216ENST00000624403 PLEKHD1A6NEE1 506 aa15.48■□□□□ 0.07
ATRX-216ENST00000624403 ZEB1P37275 1124 aaPredicted RBP15.48■□□□□ 0.07
ATRX-216ENST00000624403 UHRF1BP1LA0JNW5 1464 aa15.47■□□□□ 0.07
ATRX-216ENST00000624403 TCOF1Q13428 1488 aaKnown RBP15.47■□□□□ 0.07
ATRX-216ENST00000624403 ADCY10Q96PN6 1610 aa15.47■□□□□ 0.07
ATRX-216ENST00000624403 PTPN23Q9H3S7 1636 aa15.47■□□□□ 0.07
ATRX-216ENST00000624403 MIA2Q96PC5 1412 aa15.47■□□□□ 0.07
ATRX-216ENST00000624403 KIF14Q15058 1648 aa15.46■□□□□ 0.06
ATRX-216ENST00000624403 ABCC10Q5T3U5 1492 aa15.41■□□□□ 0.06
ATRX-216ENST00000624403 GPATCH8Q9UKJ3 1502 aaKnown RBP15.41■□□□□ 0.06
ATRX-216ENST00000624403 PTPRKQ15262 1439 aa15.41■□□□□ 0.06
ATRX-216ENST00000624403 KDM5BQ9UGL1 1544 aa15.4■□□□□ 0.06
ATRX-216ENST00000624403 SETD5Q9C0A6 1442 aa15.39■□□□□ 0.05
ATRX-216ENST00000624403 ZCCHC11Q5TAX3 1644 aaKnown RBP15.39■□□□□ 0.05
ATRX-216ENST00000624403 ITSN2Q9NZM3 1697 aa15.38■□□□□ 0.05
ATRX-216ENST00000624403 RAB3GAP2Q9H2M9 1393 aa15.37■□□□□ 0.05
ATRX-216ENST00000624403 CFDP1Q9UEE9 299 aaPredicted RBP15.36■□□□□ 0.05
ATRX-216ENST00000624403 ZNF644Q9H582 1327 aaPredicted RBP15.36■□□□□ 0.05
ATRX-216ENST00000624403 PIP4P2Q8N4L2 257 aa15.35■□□□□ 0.05
ATRX-216ENST00000624403 CLEC11AQ9Y240 323 aa15.35■□□□□ 0.05
ATRX-216ENST00000624403 DHX57Q6P158 1386 aaKnown RBP15.35■□□□□ 0.05
ATRX-216ENST00000624403 SPDYE1Q8NFV5 336 aaPredicted RBP15.34■□□□□ 0.05
ATRX-216ENST00000624403 CAMSAP2Q08AD1 1489 aa15.33■□□□□ 0.05
ATRX-216ENST00000624403 CDC42BPAQ5VT25 1732 aa15.33■□□□□ 0.04
ATRX-216ENST00000624403 HFM1A2PYH4 1435 aa15.32■□□□□ 0.04
ATRX-216ENST00000624403 DAPK1P53355 1430 aa15.32■□□□□ 0.04
ATRX-216ENST00000624403 ABCC5O15440 1437 aa15.31■□□□□ 0.04
ATRX-216ENST00000624403 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.31■□□□□ 0.04
ATRX-216ENST00000624403 DNMT1P26358 1616 aaKnown RBP15.3■□□□□ 0.04
ATRX-216ENST00000624403 ZNF777Q9ULD5 760 aaPredicted RBP15.3■□□□□ 0.04
ATRX-216ENST00000624403 TTC37Q6PGP7 1564 aa15.29■□□□□ 0.04
ATRX-216ENST00000624403 NAIPQ13075 1403 aa15.29■□□□□ 0.04
ATRX-216ENST00000624403 SPDYE4A6NLX3 237 aa15.29■□□□□ 0.04
ATRX-216ENST00000624403 FXR2P51116 673 aaKnown RBP eCLIP15.29■□□□□ 0.042e-7■□□□□ 9.9
ATRX-216ENST00000624403 KCNH8Q96L42 1107 aa15.29■□□□□ 0.04
ATRX-216ENST00000624403 CHIC2Q9UKJ5 165 aa15.29■□□□□ 0.04
ATRX-216ENST00000624403 AKNAQ7Z591 1439 aa15.28■□□□□ 0.04
ATRX-216ENST00000624403 PREX2Q70Z35 1606 aa15.28■□□□□ 0.04
ATRX-216ENST00000624403 RRP7BPQ9NSQ0 103 aa15.26■□□□□ 0.03
ATRX-216ENST00000624403 WDR7Q9Y4E6 1490 aa15.26■□□□□ 0.03
ATRX-216ENST00000624403 ROCK1Q13464 1354 aa15.25■□□□□ 0.03
ATRX-216ENST00000624403 CLSPNQ9HAW4 1339 aa15.25■□□□□ 0.03
ATRX-216ENST00000624403 CDC42BPBQ9Y5S2 1711 aa15.24■□□□□ 0.03
ATRX-216ENST00000624403 GCC2Q8IWJ2 1684 aa15.24■□□□□ 0.03
ATRX-216ENST00000624403 ASXL2Q76L83 1435 aa15.23■□□□□ 0.03
ATRX-216ENST00000624403 SAMD9LQ8IVG5 1584 aa15.23■□□□□ 0.03
ATRX-216ENST00000624403 ARHGAP5Q13017 1502 aa15.22■□□□□ 0.03
ATRX-216ENST00000624403 NPM1P06748 294 aaKnown RBP eCLIP15.22■□□□□ 0.03
ATRX-216ENST00000624403 PLCH2O75038 1416 aa15.22■□□□□ 0.03
ATRX-216ENST00000624403 MYO5CQ9NQX4 1742 aa15.22■□□□□ 0.03
ATRX-216ENST00000624403 CROCC2H7BZ55 1655 aa15.22■□□□□ 0.03
ATRX-216ENST00000624403 RIMBP3CA6NJZ7 1639 aa15.21■□□□□ 0.02
ATRX-216ENST00000624403 RIMBP3BA6NNM3 1639 aa15.21■□□□□ 0.02
ATRX-216ENST00000624403 RIMBP3Q9UFD9 1639 aa15.21■□□□□ 0.02
ATRX-216ENST00000624403 ARHGEF5Q12774 1597 aa15.2■□□□□ 0.02
ATRX-216ENST00000624403 HNRNPMP52272 730 aaKnown RBP eCLIP15.2■□□□□ 0.02
ATRX-216ENST00000624403 ADGRL2O95490 1459 aa15.2■□□□□ 0.02
ATRX-216ENST00000624403 MBD5Q9P267 1494 aa15.2■□□□□ 0.02
ATRX-216ENST00000624403 MAPKBP1O60336 1514 aa15.19■□□□□ 0.02
ATRX-216ENST00000624403 KDM6BO15054 1643 aa15.19■□□□□ 0.02
ATRX-216ENST00000624403 SP7Q8TDD2 431 aaPredicted RBP15.19■□□□□ 0.02
ATRX-216ENST00000624403 SHANK2Q9UPX8 1470 aa15.19■□□□□ 0.02
ATRX-216ENST00000624403 ADGBQ8N7X0 1667 aa15.18■□□□□ 0.02
ATRX-216ENST00000624403 NCOA1Q15788 1441 aa15.17■□□□□ 0.02
ATRX-216ENST00000624403 PLEKHH2Q8IVE3 1493 aa15.17■□□□□ 0.02
ATRX-216ENST00000624403 C9orf84Q5VXU9 1444 aa15.17■□□□□ 0.02
ATRX-216ENST00000624403 CCDC141Q6ZP82 1450 aa15.16■□□□□ 0.02
ATRX-216ENST00000624403 ANKRD30AQ9BXX3 1397 aa15.16■□□□□ 0.02
ATRX-216ENST00000624403 EFCAB2Q5VUJ9 269 aa15.16■□□□□ 0.02
ATRX-216ENST00000624403 ABCA9Q8IUA7 1624 aa15.16■□□□□ 0.02
ATRX-216ENST00000624403 ARAP3Q8WWN8 1544 aa15.16■□□□□ 0.02
ATRX-216ENST00000624403 SYCP2Q9BX26 1530 aa15.16■□□□□ 0.02
ATRX-216ENST00000624403 KIAA1107Q9UPP5 1409 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms