RNA–Protein interactions for RNA: ENST00000624032.3

ATRX-213, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 3,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-213ENST00000624032 ZNF777Q9ULD5 760 aaPredicted RBP17.15■□□□□ 0.34
ATRX-213ENST00000624032 TTC37Q6PGP7 1564 aa17.15■□□□□ 0.34
ATRX-213ENST00000624032 CFDP1Q9UEE9 299 aaPredicted RBP17.15■□□□□ 0.34
ATRX-213ENST00000624032 CDC42BPAQ5VT25 1732 aa17.14■□□□□ 0.33
ATRX-213ENST00000624032 MIA2Q96PC5 1412 aa17.12■□□□□ 0.33
ATRX-213ENST00000624032 ITSN2Q9NZM3 1697 aa17.1■□□□□ 0.33
ATRX-213ENST00000624032 TCOF1Q13428 1488 aaKnown RBP17.09■□□□□ 0.33
ATRX-213ENST00000624032 CDC42BPBQ9Y5S2 1711 aa17.08■□□□□ 0.32
ATRX-213ENST00000624032 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.08■□□□□ 0.32
ATRX-213ENST00000624032 PTPRKQ15262 1439 aa17.07■□□□□ 0.32
ATRX-213ENST00000624032 CAMSAP2Q08AD1 1489 aa17.06■□□□□ 0.32
ATRX-213ENST00000624032 PREX2Q70Z35 1606 aa17.06■□□□□ 0.32
ATRX-213ENST00000624032 MYO5CQ9NQX4 1742 aa17.06■□□□□ 0.32
ATRX-213ENST00000624032 ARHGAP5Q13017 1502 aa17.05■□□□□ 0.32
ATRX-213ENST00000624032 CHIC2Q9UKJ5 165 aa17.04■□□□□ 0.32
ATRX-213ENST00000624032 DNAJC5Q9H3Z4 198 aa17.04■□□□□ 0.32
ATRX-213ENST00000624032 MAPKBP1O60336 1514 aa17.03■□□□□ 0.32
ATRX-213ENST00000624032 PLCH2O75038 1416 aa17.02■□□□□ 0.32
ATRX-213ENST00000624032 ABCA9Q8IUA7 1624 aa17.02■□□□□ 0.32
ATRX-213ENST00000624032 HNRNPMP52272 730 aaKnown RBP eCLIP17.02■□□□□ 0.311e-7■■■■■ 32.5
ATRX-213ENST00000624032 SAMD9LQ8IVG5 1584 aa17.01■□□□□ 0.31
ATRX-213ENST00000624032 ABCC5O15440 1437 aa17■□□□□ 0.31
ATRX-213ENST00000624032 DAPK1P53355 1430 aa16.99■□□□□ 0.31
ATRX-213ENST00000624032 EFCAB2Q5VUJ9 269 aa16.98■□□□□ 0.31
ATRX-213ENST00000624032 DNMT1P26358 1616 aaKnown RBP16.97■□□□□ 0.31
ATRX-213ENST00000624032 RRP7BPQ9NSQ0 103 aa16.97■□□□□ 0.31
ATRX-213ENST00000624032 CD109Q6YHK3 1445 aa16.97■□□□□ 0.31
ATRX-213ENST00000624032 FAM69CQ0P6D2 419 aa16.96■□□□□ 0.31
ATRX-213ENST00000624032 SYCP2Q9BX26 1530 aa16.95■□□□□ 0.3
ATRX-213ENST00000624032 MBD5Q9P267 1494 aa16.94■□□□□ 0.3
ATRX-213ENST00000624032 FANCAO15360 1455 aa16.94■□□□□ 0.3
ATRX-213ENST00000624032 ARHGEF12Q9NZN5 1544 aa16.94■□□□□ 0.3
ATRX-213ENST00000624032 ZNF316A6NFI3 1004 aaPredicted RBP16.94■□□□□ 0.3
ATRX-213ENST00000624032 SETD5Q9C0A6 1442 aa16.92■□□□□ 0.3
ATRX-213ENST00000624032 DIP2BQ9P265 1576 aa16.92■□□□□ 0.3
ATRX-213ENST00000624032 RAB3GAP2Q9H2M9 1393 aa16.92■□□□□ 0.3
ATRX-213ENST00000624032 ARAP3Q8WWN8 1544 aa16.91■□□□□ 0.3
ATRX-213ENST00000624032 CROCC2H7BZ55 1655 aa16.9■□□□□ 0.3
ATRX-213ENST00000624032 AKNAQ7Z591 1439 aa16.89■□□□□ 0.3
ATRX-213ENST00000624032 ABCC1P33527 1531 aa16.89■□□□□ 0.29
ATRX-213ENST00000624032 NAIPQ13075 1403 aa16.89■□□□□ 0.29
ATRX-213ENST00000624032 GLI2P10070 1586 aa16.89■□□□□ 0.29
ATRX-213ENST00000624032 ARHGEF5Q12774 1597 aa16.89■□□□□ 0.29
ATRX-213ENST00000624032 MAP3K4Q9Y6R4 1608 aa16.88■□□□□ 0.29
ATRX-213ENST00000624032 TSPY4P0CV99 314 aa16.88■□□□□ 0.29
ATRX-213ENST00000624032 TSPY10P0CW01 314 aa16.88■□□□□ 0.29
ATRX-213ENST00000624032 KIAA1107Q9UPP5 1409 aa16.88■□□□□ 0.29
ATRX-213ENST00000624032 TRAPPC8Q9Y2L5 1435 aa16.88■□□□□ 0.29
ATRX-213ENST00000624032 HFM1A2PYH4 1435 aa16.88■□□□□ 0.29
ATRX-213ENST00000624032 CCDC141Q6ZP82 1450 aa16.88■□□□□ 0.29
ATRX-213ENST00000624032 PLEKHH2Q8IVE3 1493 aa16.88■□□□□ 0.29
ATRX-213ENST00000624032 AFAP1Q8N556 730 aa16.88■□□□□ 0.29
ATRX-213ENST00000624032 TSPOAP1O95153 1857 aa16.87■□□□□ 0.29
ATRX-213ENST00000624032 C9orf84Q5VXU9 1444 aa16.87■□□□□ 0.29
ATRX-213ENST00000624032 ADGRL1O94910 1474 aa16.86■□□□□ 0.29
ATRX-213ENST00000624032 SCAPERQ9BY12 1400 aa16.86■□□□□ 0.29
ATRX-213ENST00000624032 KIF13AQ9H1H9 1805 aa16.85■□□□□ 0.29
ATRX-213ENST00000624032 NCOA1Q15788 1441 aa16.85■□□□□ 0.29
ATRX-213ENST00000624032 RSPH4AQ5TD94 716 aa16.85■□□□□ 0.29
ATRX-213ENST00000624032 KDM6BO15054 1643 aa16.85■□□□□ 0.29
ATRX-213ENST00000624032 ROCK1Q13464 1354 aa16.84■□□□□ 0.29
ATRX-213ENST00000624032 ADGBQ8N7X0 1667 aa16.84■□□□□ 0.29
ATRX-213ENST00000624032 SHANK2Q9UPX8 1470 aa16.83■□□□□ 0.28
ATRX-213ENST00000624032 YTHDC1Q96MU7 727 aaKnown RBP16.82■□□□□ 0.28
ATRX-213ENST00000624032 ANKRD30AQ9BXX3 1397 aa16.82■□□□□ 0.28
ATRX-213ENST00000624032 GCC2Q8IWJ2 1684 aa16.82■□□□□ 0.28
ATRX-213ENST00000624032 ADGRL2O95490 1459 aa16.81■□□□□ 0.28
ATRX-213ENST00000624032 PPRC1Q5VV67 1664 aaKnown RBP16.8■□□□□ 0.28
ATRX-213ENST00000624032 CFAP74Q9C0B2 1584 aa16.8■□□□□ 0.28
ATRX-213ENST00000624032 SPAG9O60271 1321 aaKnown RBP16.79■□□□□ 0.28
ATRX-213ENST00000624032 DHX57Q6P158 1386 aaKnown RBP16.79■□□□□ 0.28
ATRX-213ENST00000624032 NEO1Q92859 1461 aa16.78■□□□□ 0.28
ATRX-213ENST00000624032 RAPGEF3O95398 923 aa16.78■□□□□ 0.28
ATRX-213ENST00000624032 MYT1LQ9UL68 1186 aa16.78■□□□□ 0.28
ATRX-213ENST00000624032 KIF15Q9NS87 1388 aa16.78■□□□□ 0.28
ATRX-213ENST00000624032 TRHP20396 242 aaPredicted RBP16.77■□□□□ 0.28
ATRX-213ENST00000624032 MAST1Q9Y2H9 1570 aa16.77■□□□□ 0.28
ATRX-213ENST00000624032 TRIM52Q96A61 297 aa16.76■□□□□ 0.27
ATRX-213ENST00000624032 MIER1Q8N108 512 aa16.74■□□□□ 0.27
ATRX-213ENST00000624032 POGZQ7Z3K3 1410 aa16.74■□□□□ 0.27
ATRX-213ENST00000624032 ANKRD50Q9ULJ7 1429 aa16.74■□□□□ 0.27
ATRX-213ENST00000624032 DENND4BO75064 1496 aaPredicted RBP16.73■□□□□ 0.27
ATRX-213ENST00000624032 ZFYVE16Q7Z3T8 1539 aa16.73■□□□□ 0.27
ATRX-213ENST00000624032 ZNF518AQ6AHZ1 1483 aa16.73■□□□□ 0.27
ATRX-213ENST00000624032 TEX14Q8IWB6 1497 aa16.72■□□□□ 0.27
ATRX-213ENST00000624032 ATP7AQ04656 1500 aa16.71■□□□□ 0.27
ATRX-213ENST00000624032 PLXNC1O60486 1568 aa16.71■□□□□ 0.26
ATRX-213ENST00000624032 INO80Q9ULG1 1556 aaPredicted RBP16.71■□□□□ 0.26
ATRX-213ENST00000624032 RTEL1-TNFRSF6BF6WH68 1400 aa16.7■□□□□ 0.26
ATRX-213ENST00000624032 KIDINS220Q9ULH0 1771 aa16.69■□□□□ 0.26
ATRX-213ENST00000624032 KDM5CP41229 1560 aa16.69■□□□□ 0.26
ATRX-213ENST00000624032 RICTORQ6R327 1708 aa16.68■□□□□ 0.26
ATRX-213ENST00000624032 COL17A1Q9UMD9 1497 aaPredicted RBP16.67■□□□□ 0.26
ATRX-213ENST00000624032 FRMPD1Q5SYB0 1578 aa16.67■□□□□ 0.26
ATRX-213ENST00000624032 DUOX2Q9NRD8 1548 aa16.66■□□□□ 0.26
ATRX-213ENST00000624032 HECW2Q9P2P5 1572 aa16.65■□□□□ 0.26
ATRX-213ENST00000624032 MPHOSPH9Q99550 1183 aa16.65■□□□□ 0.26
ATRX-213ENST00000624032 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.65■□□□□ 0.268e-7■■□□□ 14.4
ATRX-213ENST00000624032 MLH3Q9UHC1 1453 aa16.64■□□□□ 0.26
ATRX-213ENST00000624032 FOXD1Q16676 465 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms