RNA–Protein interactions for RNA: ENST00000623935.1

SOX9-AS1-217, SOX9 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene SOX9-AS1, Length 1,563 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-217ENST00000623935 MAPK8IP2Q13387 824 aaPredicted RBP12.94□□□□□ -0.34
SOX9-AS1-217ENST00000623935 FAM50AQ14320 339 aaKnown RBP12.94□□□□□ -0.34
SOX9-AS1-217ENST00000623935 ABCC10Q5T3U5 1492 aa12.94□□□□□ -0.34
SOX9-AS1-217ENST00000623935 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.93□□□□□ -0.349e-13■■■■■ 140.2
SOX9-AS1-217ENST00000623935 GPATCH8Q9UKJ3 1502 aaKnown RBP12.93□□□□□ -0.34
SOX9-AS1-217ENST00000623935 MYO5CQ9NQX4 1742 aa12.92□□□□□ -0.34
SOX9-AS1-217ENST00000623935 CDC42BPAQ5VT25 1732 aa12.91□□□□□ -0.34
SOX9-AS1-217ENST00000623935 ZNF777Q9ULD5 760 aaPredicted RBP12.91□□□□□ -0.34
SOX9-AS1-217ENST00000623935 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.91□□□□□ -0.34
SOX9-AS1-217ENST00000623935 TTC37Q6PGP7 1564 aa12.91□□□□□ -0.34
SOX9-AS1-217ENST00000623935 PTPN23Q9H3S7 1636 aa12.91□□□□□ -0.34
SOX9-AS1-217ENST00000623935 ABCA9Q8IUA7 1624 aa12.9□□□□□ -0.34
SOX9-AS1-217ENST00000623935 PREX2Q70Z35 1606 aa12.89□□□□□ -0.35
SOX9-AS1-217ENST00000623935 ARHGAP5Q13017 1502 aa12.89□□□□□ -0.35
SOX9-AS1-217ENST00000623935 PLCH2O75038 1416 aa12.89□□□□□ -0.35
SOX9-AS1-217ENST00000623935 EFCAB2Q5VUJ9 269 aa12.88□□□□□ -0.35
SOX9-AS1-217ENST00000623935 ITGAEP38570 1179 aa12.87□□□□□ -0.35
SOX9-AS1-217ENST00000623935 CDC42BPBQ9Y5S2 1711 aa12.87□□□□□ -0.35
SOX9-AS1-217ENST00000623935 TCOF1Q13428 1488 aaKnown RBP12.87□□□□□ -0.35
SOX9-AS1-217ENST00000623935 ARAP3Q8WWN8 1544 aa12.87□□□□□ -0.35
SOX9-AS1-217ENST00000623935 CD109Q6YHK3 1445 aa12.86□□□□□ -0.35
SOX9-AS1-217ENST00000623935 FAM69CQ0P6D2 419 aa12.86□□□□□ -0.35
SOX9-AS1-217ENST00000623935 GLI2P10070 1586 aa12.86□□□□□ -0.35
SOX9-AS1-217ENST00000623935 CAMSAP2Q08AD1 1489 aa12.85□□□□□ -0.35
SOX9-AS1-217ENST00000623935 PLEKHH2Q8IVE3 1493 aa12.85□□□□□ -0.35
SOX9-AS1-217ENST00000623935 DIP2BQ9P265 1576 aa12.84□□□□□ -0.35
SOX9-AS1-217ENST00000623935 RSPH4AQ5TD94 716 aa12.83□□□□□ -0.36
SOX9-AS1-217ENST00000623935 ZNF644Q9H582 1327 aaPredicted RBP12.83□□□□□ -0.36
SOX9-AS1-217ENST00000623935 FANCAO15360 1455 aa12.83□□□□□ -0.36
SOX9-AS1-217ENST00000623935 CFAP74Q9C0B2 1584 aa12.82□□□□□ -0.36
SOX9-AS1-217ENST00000623935 MAP3K4Q9Y6R4 1608 aa12.81□□□□□ -0.36
SOX9-AS1-217ENST00000623935 SAMD9LQ8IVG5 1584 aa12.81□□□□□ -0.36
SOX9-AS1-217ENST00000623935 TSPY4P0CV99 314 aa12.8□□□□□ -0.36
SOX9-AS1-217ENST00000623935 TSPY10P0CW01 314 aa12.8□□□□□ -0.36
SOX9-AS1-217ENST00000623935 KIAA1107Q9UPP5 1409 aa12.8□□□□□ -0.36
SOX9-AS1-217ENST00000623935 DNMT1P26358 1616 aaKnown RBP12.79□□□□□ -0.36
SOX9-AS1-217ENST00000623935 HNRNPMP52272 730 aaKnown RBP eCLIP12.79□□□□□ -0.36
SOX9-AS1-217ENST00000623935 TEX14Q8IWB6 1497 aa12.78□□□□□ -0.36
SOX9-AS1-217ENST00000623935 DAPK1P53355 1430 aa12.78□□□□□ -0.36
SOX9-AS1-217ENST00000623935 KCNA4P22459 653 aa12.78□□□□□ -0.36
SOX9-AS1-217ENST00000623935 NEO1Q92859 1461 aa12.78□□□□□ -0.36
SOX9-AS1-217ENST00000623935 TRHP20396 242 aaPredicted RBP12.77□□□□□ -0.36
SOX9-AS1-217ENST00000623935 ARHGEF5Q12774 1597 aa12.77□□□□□ -0.36
SOX9-AS1-217ENST00000623935 SYCP2Q9BX26 1530 aa12.77□□□□□ -0.36
SOX9-AS1-217ENST00000623935 ADGRL1O94910 1474 aa12.77□□□□□ -0.37
SOX9-AS1-217ENST00000623935 KIF13AQ9H1H9 1805 aa12.77□□□□□ -0.37
SOX9-AS1-217ENST00000623935 AKNAQ7Z591 1439 aa12.77□□□□□ -0.37
SOX9-AS1-217ENST00000623935 ABCC1P33527 1531 aa12.76□□□□□ -0.37
SOX9-AS1-217ENST00000623935 CCDC141Q6ZP82 1450 aa12.76□□□□□ -0.37
SOX9-AS1-217ENST00000623935 ABCC5O15440 1437 aa12.76□□□□□ -0.37
SOX9-AS1-217ENST00000623935 CHIC2Q9UKJ5 165 aa12.76□□□□□ -0.37
SOX9-AS1-217ENST00000623935 TSPOAP1O95153 1857 aa12.75□□□□□ -0.37
SOX9-AS1-217ENST00000623935 SCAPERQ9BY12 1400 aa12.75□□□□□ -0.37
SOX9-AS1-217ENST00000623935 MBD5Q9P267 1494 aa12.74□□□□□ -0.37
SOX9-AS1-217ENST00000623935 CROCC2H7BZ55 1655 aa12.74□□□□□ -0.37
SOX9-AS1-217ENST00000623935 SHANK2Q9UPX8 1470 aa12.74□□□□□ -0.37
SOX9-AS1-217ENST00000623935 RNF39Q9H2S5 420 aa12.73□□□□□ -0.37
SOX9-AS1-217ENST00000623935 ANKRD30AQ9BXX3 1397 aa12.73□□□□□ -0.37
SOX9-AS1-217ENST00000623935 MYT1LQ9UL68 1186 aa12.73□□□□□ -0.37
SOX9-AS1-217ENST00000623935 ROCK1Q13464 1354 aa12.72□□□□□ -0.37
SOX9-AS1-217ENST00000623935 PTPRKQ15262 1439 aa12.72□□□□□ -0.37
SOX9-AS1-217ENST00000623935 C9orf84Q5VXU9 1444 aa12.72□□□□□ -0.37
SOX9-AS1-217ENST00000623935 ADGBQ8N7X0 1667 aa12.72□□□□□ -0.37
SOX9-AS1-217ENST00000623935 SETD5Q9C0A6 1442 aa12.71□□□□□ -0.37
SOX9-AS1-217ENST00000623935 ARHGEF12Q9NZN5 1544 aa12.71□□□□□ -0.37
SOX9-AS1-217ENST00000623935 ZNF518AQ6AHZ1 1483 aa12.71□□□□□ -0.38
SOX9-AS1-217ENST00000623935 RRP7BPQ9NSQ0 103 aa12.7□□□□□ -0.38
SOX9-AS1-217ENST00000623935 DENND4BO75064 1496 aaPredicted RBP12.7□□□□□ -0.38
SOX9-AS1-217ENST00000623935 SPAG9O60271 1321 aaKnown RBP12.7□□□□□ -0.38
SOX9-AS1-217ENST00000623935 HFM1A2PYH4 1435 aa12.7□□□□□ -0.38
SOX9-AS1-217ENST00000623935 TRAPPC8Q9Y2L5 1435 aa12.7□□□□□ -0.38
SOX9-AS1-217ENST00000623935 AFAP1Q8N556 730 aa12.69□□□□□ -0.38
SOX9-AS1-217ENST00000623935 ACIN1Q9UKV3 1341 aaKnown RBP12.69□□□□□ -0.38
SOX9-AS1-217ENST00000623935 MAST1Q9Y2H9 1570 aa12.69□□□□□ -0.38
SOX9-AS1-217ENST00000623935 ADGRL2O95490 1459 aa12.69□□□□□ -0.38
SOX9-AS1-217ENST00000623935 PPRC1Q5VV67 1664 aaKnown RBP12.68□□□□□ -0.38
SOX9-AS1-217ENST00000623935 RTEL1-TNFRSF6BF6WH68 1400 aa12.68□□□□□ -0.38
SOX9-AS1-217ENST00000623935 NCOA1Q15788 1441 aa12.68□□□□□ -0.38
SOX9-AS1-217ENST00000623935 POGZQ7Z3K3 1410 aa12.68□□□□□ -0.38
SOX9-AS1-217ENST00000623935 HRCP23327 699 aa12.67□□□□□ -0.38
SOX9-AS1-217ENST00000623935 NAIPQ13075 1403 aa12.67□□□□□ -0.38
SOX9-AS1-217ENST00000623935 GCC2Q8IWJ2 1684 aa12.66□□□□□ -0.38
SOX9-AS1-217ENST00000623935 RAB3GAP2Q9H2M9 1393 aa12.66□□□□□ -0.38
SOX9-AS1-217ENST00000623935 KIF15Q9NS87 1388 aa12.65□□□□□ -0.38
SOX9-AS1-217ENST00000623935 RAPGEF3O95398 923 aa12.64□□□□□ -0.39
SOX9-AS1-217ENST00000623935 ATP7AQ04656 1500 aa12.64□□□□□ -0.39
SOX9-AS1-217ENST00000623935 PLXNC1O60486 1568 aa12.64□□□□□ -0.39
SOX9-AS1-217ENST00000623935 KDM5CP41229 1560 aa12.63□□□□□ -0.39
SOX9-AS1-217ENST00000623935 ZFYVE16Q7Z3T8 1539 aa12.63□□□□□ -0.39
SOX9-AS1-217ENST00000623935 ANKRD50Q9ULJ7 1429 aa12.62□□□□□ -0.39
SOX9-AS1-217ENST00000623935 MLH3Q9UHC1 1453 aa12.62□□□□□ -0.39
SOX9-AS1-217ENST00000623935 HECW2Q9P2P5 1572 aa12.62□□□□□ -0.39
SOX9-AS1-217ENST00000623935 INO80Q9ULG1 1556 aaPredicted RBP12.62□□□□□ -0.39
SOX9-AS1-217ENST00000623935 RICTORQ6R327 1708 aa12.62□□□□□ -0.39
SOX9-AS1-217ENST00000623935 DUOX2Q9NRD8 1548 aa12.62□□□□□ -0.39
SOX9-AS1-217ENST00000623935 CCER1Q8TC90 406 aaPredicted RBP12.61□□□□□ -0.39
SOX9-AS1-217ENST00000623935 TRIM52Q96A61 297 aa12.6□□□□□ -0.39
SOX9-AS1-217ENST00000623935 SCAF1Q9H7N4 1312 aaKnown RBP12.6□□□□□ -0.39
SOX9-AS1-217ENST00000623935 POTEHQ6S545 545 aa12.6□□□□□ -0.39
SOX9-AS1-217ENST00000623935 MAGI2Q86UL8 1455 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms