RNA–Protein interactions for RNA: ENST00000622892.4

PSME3-217, Transcript of proteasome activator subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PSME3, Length 3,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-217ENST00000622892 CCDC184Q52MB2 194 aa18.01■□□□□ 0.47
PSME3-217ENST00000622892 ERICH6Q7L0X2 663 aa18.01■□□□□ 0.47
PSME3-217ENST00000622892 FGD6Q6ZV73 1430 aa18.01■□□□□ 0.47
PSME3-217ENST00000622892 PTPRKQ15262 1439 aa18■□□□□ 0.47
PSME3-217ENST00000622892 CCDC18Q5T9S5 1454 aa17.99■□□□□ 0.47
PSME3-217ENST00000622892 PLEKHD1A6NEE1 506 aa17.99■□□□□ 0.47
PSME3-217ENST00000622892 HSPA5P11021 654 aaKnown RBP17.98■□□□□ 0.47
PSME3-217ENST00000622892 WASHC2AQ641Q2 1341 aa17.98■□□□□ 0.47
PSME3-217ENST00000622892 FAM9BQ8IZU0 186 aa17.97■□□□□ 0.47
PSME3-217ENST00000622892 EHBP1L1Q8N3D4 1523 aa17.96■□□□□ 0.47
PSME3-217ENST00000622892 MYOM3Q5VTT5 1437 aa17.96■□□□□ 0.47
PSME3-217ENST00000622892 SUPT6HQ7KZ85 1726 aaKnown RBP17.95■□□□□ 0.46
PSME3-217ENST00000622892 B4GALNT3Q6L9W6 998 aa17.94■□□□□ 0.46
PSME3-217ENST00000622892 CFDP1Q9UEE9 299 aaPredicted RBP17.94■□□□□ 0.46
PSME3-217ENST00000622892 CNGB1Q14028 1251 aaPredicted RBP17.93■□□□□ 0.46
PSME3-217ENST00000622892 FANCIQ9NVI1 1328 aa17.93■□□□□ 0.46
PSME3-217ENST00000622892 UACAQ9BZF9 1416 aa17.93■□□□□ 0.46
PSME3-217ENST00000622892 OSCARQ8IYS5 282 aa17.93■□□□□ 0.46
PSME3-217ENST00000622892 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.9■□□□□ 0.46
PSME3-217ENST00000622892 FOXD1Q16676 465 aa17.9■□□□□ 0.46
PSME3-217ENST00000622892 ATP10BO94823 1461 aa17.9■□□□□ 0.46
PSME3-217ENST00000622892 HFM1A2PYH4 1435 aa17.89■□□□□ 0.45
PSME3-217ENST00000622892 C11orf95C9JLR9 678 aaPredicted RBP17.89■□□□□ 0.45
PSME3-217ENST00000622892 NAIPQ13075 1403 aa17.89■□□□□ 0.45
PSME3-217ENST00000622892 PPP4R2Q9NY27 417 aa17.89■□□□□ 0.45
PSME3-217ENST00000622892 EIF4G2P78344 907 aaKnown RBP eCLIP17.88■□□□□ 0.45
PSME3-217ENST00000622892 KIF14Q15058 1648 aa17.88■□□□□ 0.45
PSME3-217ENST00000622892 MRS2Q9HD23 443 aa17.87■□□□□ 0.45
PSME3-217ENST00000622892 SENP3-EIF4A1A0A087X0R7 540 aa17.86■□□□□ 0.45
PSME3-217ENST00000622892 PTPN23Q9H3S7 1636 aa17.86■□□□□ 0.45
PSME3-217ENST00000622892 TROQ12816 1431 aaPredicted RBP17.85■□□□□ 0.45
PSME3-217ENST00000622892 ARHGEF11O15085 1522 aa17.85■□□□□ 0.45
PSME3-217ENST00000622892 L3MBTL2Q969R5 705 aa17.83■□□□□ 0.45
PSME3-217ENST00000622892 ABCA8O94911 1581 aa17.83■□□□□ 0.44
PSME3-217ENST00000622892 HNRNPMP52272 730 aaKnown RBP eCLIP17.83■□□□□ 0.44
PSME3-217ENST00000622892 PRKRIP1Q9H875 184 aaPredicted RBP17.82■□□□□ 0.44
PSME3-217ENST00000622892 KDM5BQ9UGL1 1544 aa17.81■□□□□ 0.44
PSME3-217ENST00000622892 CLASP1Q7Z460 1538 aa17.8■□□□□ 0.44
PSME3-217ENST00000622892 MPHOSPH9Q99550 1183 aa17.77■□□□□ 0.44
PSME3-217ENST00000622892 CYB5RLQ6IPT4 315 aa17.77■□□□□ 0.43
PSME3-217ENST00000622892 POLR3GLQ9BT43 218 aa17.77■□□□□ 0.43
PSME3-217ENST00000622892 SHROOM2Q13796 1616 aa17.76■□□□□ 0.43
PSME3-217ENST00000622892 NBR1Q14596 966 aa17.76■□□□□ 0.43
PSME3-217ENST00000622892 ERICH6BQ5W0A0 696 aa17.75■□□□□ 0.43
PSME3-217ENST00000622892 CNTLNQ9NXG0 1405 aa17.75■□□□□ 0.43
PSME3-217ENST00000622892 GPATCH8Q9UKJ3 1502 aaKnown RBP17.74■□□□□ 0.43
PSME3-217ENST00000622892 NBPF8Q3BBV2 869 aa17.74■□□□□ 0.43
PSME3-217ENST00000622892 MYT1LQ9UL68 1186 aa17.73■□□□□ 0.43
PSME3-217ENST00000622892 CCDC7Q96M83 1385 aa17.73■□□□□ 0.43
PSME3-217ENST00000622892 DEKP35659 375 aaKnown RBP17.73■□□□□ 0.43
PSME3-217ENST00000622892 ZBED9Q6R2W3 1325 aa17.72■□□□□ 0.43
PSME3-217ENST00000622892 DENND4BO75064 1496 aaPredicted RBP17.71■□□□□ 0.43
PSME3-217ENST00000622892 CAMSAP2Q08AD1 1489 aa17.71■□□□□ 0.43
PSME3-217ENST00000622892 PAK3O75914 559 aaPredicted RBP17.71■□□□□ 0.43
PSME3-217ENST00000622892 ABCC2Q92887 1545 aa17.7■□□□□ 0.42
PSME3-217ENST00000622892 DAPK1P53355 1430 aa17.7■□□□□ 0.42
PSME3-217ENST00000622892 ABCC5O15440 1437 aa17.69■□□□□ 0.42
PSME3-217ENST00000622892 MIA2Q96PC5 1412 aa17.69■□□□□ 0.42
PSME3-217ENST00000622892 NPM1P06748 294 aaKnown RBP eCLIP17.69■□□□□ 0.42
PSME3-217ENST00000622892 KIF7Q2M1P5 1343 aa17.68■□□□□ 0.42
PSME3-217ENST00000622892 KDM6BO15054 1643 aa17.67■□□□□ 0.42
PSME3-217ENST00000622892 TSPY4P0CV99 314 aa17.67■□□□□ 0.42
PSME3-217ENST00000622892 TSPY10P0CW01 314 aa17.67■□□□□ 0.42
PSME3-217ENST00000622892 NOP58Q9Y2X3 529 aaKnown RBP17.67■□□□□ 0.42
PSME3-217ENST00000622892 ZNF326Q5BKZ1 582 aaKnown RBP17.66■□□□□ 0.42
PSME3-217ENST00000622892 NCOA1Q15788 1441 aa17.66■□□□□ 0.42
PSME3-217ENST00000622892 AKNAQ7Z591 1439 aa17.66■□□□□ 0.42
PSME3-217ENST00000622892 ARHGAP5Q13017 1502 aa17.65■□□□□ 0.42
PSME3-217ENST00000622892 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.64■□□□□ 0.412e-7■■■□□ 16.9
PSME3-217ENST00000622892 TCOF1Q13428 1488 aaKnown RBP17.64■□□□□ 0.41
PSME3-217ENST00000622892 CCDC136Q96JN2 1154 aa17.64■□□□□ 0.41
PSME3-217ENST00000622892 ZCCHC11Q5TAX3 1644 aaKnown RBP17.64■□□□□ 0.41
PSME3-217ENST00000622892 TTC37Q6PGP7 1564 aa17.63■□□□□ 0.41
PSME3-217ENST00000622892 SLC4A1APQ9BWU0 796 aaKnown RBP17.63■□□□□ 0.41
PSME3-217ENST00000622892 CDC42BPAQ5VT25 1732 aa17.62■□□□□ 0.41
PSME3-217ENST00000622892 ABCC10Q5T3U5 1492 aa17.62■□□□□ 0.41
PSME3-217ENST00000622892 ADCY10Q96PN6 1610 aa17.61■□□□□ 0.41
PSME3-217ENST00000622892 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.59■□□□□ 0.41
PSME3-217ENST00000622892 ITSN2Q9NZM3 1697 aa17.59■□□□□ 0.41
PSME3-217ENST00000622892 AFAP1Q8N556 730 aa17.59■□□□□ 0.41
PSME3-217ENST00000622892 ANKRD30BQ9BXX2 1392 aa17.56■□□□□ 0.4
PSME3-217ENST00000622892 NUDCQ9Y266 331 aa17.56■□□□□ 0.4
PSME3-217ENST00000622892 DNMT1P26358 1616 aaKnown RBP17.56■□□□□ 0.4
PSME3-217ENST00000622892 SYCP2Q9BX26 1530 aa17.55■□□□□ 0.4
PSME3-217ENST00000622892 C9orf84Q5VXU9 1444 aa17.54■□□□□ 0.4
PSME3-217ENST00000622892 ASXL2Q76L83 1435 aa17.54■□□□□ 0.4
PSME3-217ENST00000622892 ANP32AP39687 249 aaKnown RBP17.54■□□□□ 0.4
PSME3-217ENST00000622892 EFCAB2Q5VUJ9 269 aa17.54■□□□□ 0.4
PSME3-217ENST00000622892 ANKRD30AQ9BXX3 1397 aa17.53■□□□□ 0.4
PSME3-217ENST00000622892 CDC42BPBQ9Y5S2 1711 aa17.53■□□□□ 0.4
PSME3-217ENST00000622892 SALL2Q9Y467 1007 aaPredicted RBP17.52■□□□□ 0.4
PSME3-217ENST00000622892 SPATA31E1Q6ZUB1 1445 aa17.52■□□□□ 0.39
PSME3-217ENST00000622892 SAMD9LQ8IVG5 1584 aa17.52■□□□□ 0.39
PSME3-217ENST00000622892 NPM2Q86SE8 214 aaKnown RBP17.51■□□□□ 0.39
PSME3-217ENST00000622892 SMG6Q86US8 1419 aaKnown RBP17.51■□□□□ 0.39
PSME3-217ENST00000622892 TMC1Q8TDI8 760 aa17.51■□□□□ 0.39
PSME3-217ENST00000622892 IPO9Q96P70 1041 aaKnown RBP17.51■□□□□ 0.39
PSME3-217ENST00000622892 RPRD2Q5VT52 1461 aaKnown RBP17.51■□□□□ 0.39
PSME3-217ENST00000622892 KIF15Q9NS87 1388 aa17.51■□□□□ 0.39
PSME3-217ENST00000622892 ZBTB47Q9UFB7 747 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms