RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 EHBP1L1Q8N3D4 1523 aa10.19□□□□□ -0.78
TRIM49B-202ENST00000622138 THOC2Q8NI27 1593 aaKnown RBP10.19□□□□□ -0.78
TRIM49B-202ENST00000622138 ARHGEF11O15085 1522 aa10.18□□□□□ -0.78
TRIM49B-202ENST00000622138 UGGT2Q9NYU1 1516 aa10.18□□□□□ -0.78
TRIM49B-202ENST00000622138 ZBTB47Q9UFB7 747 aaPredicted RBP10.18□□□□□ -0.78
TRIM49B-202ENST00000622138 DNAJC5BQ9UF47 199 aa10.17□□□□□ -0.78
TRIM49B-202ENST00000622138 DENND4BO75064 1496 aaPredicted RBP10.17□□□□□ -0.78
TRIM49B-202ENST00000622138 KDM6BO15054 1643 aa10.16□□□□□ -0.78
TRIM49B-202ENST00000622138 TRIM52Q96A61 297 aa10.16□□□□□ -0.78
TRIM49B-202ENST00000622138 KIF21AQ7Z4S6 1674 aa10.16□□□□□ -0.78
TRIM49B-202ENST00000622138 ZMYND15Q9H091 742 aa10.16□□□□□ -0.78
TRIM49B-202ENST00000622138 TARBP1Q13395 1621 aaKnown RBP10.15□□□□□ -0.78
TRIM49B-202ENST00000622138 GCC2Q8IWJ2 1684 aa10.14□□□□□ -0.79
TRIM49B-202ENST00000622138 ANP32CO43423 234 aa10.14□□□□□ -0.79
TRIM49B-202ENST00000622138 FAM43AQ8N2R8 423 aa10.14□□□□□ -0.79
TRIM49B-202ENST00000622138 TCOF1Q13428 1488 aaKnown RBP10.13□□□□□ -0.79
TRIM49B-202ENST00000622138 RRP7BPQ9NSQ0 103 aa10.13□□□□□ -0.79
TRIM49B-202ENST00000622138 HECW1Q76N89 1606 aa10.13□□□□□ -0.79
TRIM49B-202ENST00000622138 CDK13Q14004 1512 aaKnown RBP10.12□□□□□ -0.79
TRIM49B-202ENST00000622138 CHIC2Q9UKJ5 165 aa10.12□□□□□ -0.79
TRIM49B-202ENST00000622138 PBRM1Q86U86 1689 aa10.12□□□□□ -0.79
TRIM49B-202ENST00000622138 PPM1GO15355 546 aaPredicted RBP10.11□□□□□ -0.79
TRIM49B-202ENST00000622138 NEFMP07197 916 aa10.11□□□□□ -0.79
TRIM49B-202ENST00000622138 VSIG10Q8N0Z9 540 aa10.11□□□□□ -0.79
TRIM49B-202ENST00000622138 PDS5BQ9NTI5 1447 aa10.1□□□□□ -0.79
TRIM49B-202ENST00000622138 EPRSP07814 1512 aaKnown RBP10.1□□□□□ -0.79
TRIM49B-202ENST00000622138 BRPF3Q9ULD4 1205 aa10.1□□□□□ -0.79
TRIM49B-202ENST00000622138 ADAMTS12P58397 1594 aa10.1□□□□□ -0.79
TRIM49B-202ENST00000622138 IQGAP2Q13576 1575 aa10.09□□□□□ -0.79
TRIM49B-202ENST00000622138 WDR62O43379 1518 aa10.09□□□□□ -0.79
TRIM49B-202ENST00000622138 ARID3CA6NKF2 412 aa10.09□□□□□ -0.79
TRIM49B-202ENST00000622138 HSPA5P11021 654 aaKnown RBP10.08□□□□□ -0.8
TRIM49B-202ENST00000622138 AKNAQ7Z591 1439 aa10.08□□□□□ -0.8
TRIM49B-202ENST00000622138 IRX6P78412 446 aaPredicted RBP10.07□□□□□ -0.8
TRIM49B-202ENST00000622138 GSE1Q14687 1217 aa10.07□□□□□ -0.8
TRIM49B-202ENST00000622138 FOXD1Q16676 465 aa10.06□□□□□ -0.8
TRIM49B-202ENST00000622138 RRP9O43818 475 aaKnown RBP10.05□□□□□ -0.8
TRIM49B-202ENST00000622138 MIA2Q96PC5 1412 aa10.03□□□□□ -0.8
TRIM49B-202ENST00000622138 CCDC184Q52MB2 194 aa10.03□□□□□ -0.8
TRIM49B-202ENST00000622138 MPHOSPH9Q99550 1183 aa10.03□□□□□ -0.8
TRIM49B-202ENST00000622138 HNRNPUQ00839 825 aaKnown RBP eCLIP10.02□□□□□ -0.8
TRIM49B-202ENST00000622138 B4GALNT3Q6L9W6 998 aa10.02□□□□□ -0.8
TRIM49B-202ENST00000622138 CNTLNQ9NXG0 1405 aa10.02□□□□□ -0.8
TRIM49B-202ENST00000622138 L3MBTL2Q969R5 705 aa10.02□□□□□ -0.81
TRIM49B-202ENST00000622138 DAPK1P53355 1430 aa10.02□□□□□ -0.81
TRIM49B-202ENST00000622138 TEX14Q8IWB6 1497 aa10.02□□□□□ -0.81
TRIM49B-202ENST00000622138 DNMT1P26358 1616 aaKnown RBP10.01□□□□□ -0.81
TRIM49B-202ENST00000622138 ZNF608Q9ULD9 1512 aaPredicted RBP10.01□□□□□ -0.81
TRIM49B-202ENST00000622138 ABCC5O15440 1437 aa10.01□□□□□ -0.81
TRIM49B-202ENST00000622138 ZNF644Q9H582 1327 aaPredicted RBP10.01□□□□□ -0.81
TRIM49B-202ENST00000622138 KIAA0556O60303 1618 aa10□□□□□ -0.81
TRIM49B-202ENST00000622138 DISP1Q96F81 1524 aa10□□□□□ -0.81
TRIM49B-202ENST00000622138 NCOA1Q15788 1441 aa10□□□□□ -0.81
TRIM49B-202ENST00000622138 NBPF8Q3BBV2 869 aa10□□□□□ -0.81
TRIM49B-202ENST00000622138 NUP153P49790 1475 aaKnown RBP10□□□□□ -0.81
TRIM49B-202ENST00000622138 ANKRD30BQ9BXX2 1392 aa10□□□□□ -0.81
TRIM49B-202ENST00000622138 EIF4G2P78344 907 aaKnown RBP eCLIP9.99□□□□□ -0.81
TRIM49B-202ENST00000622138 CCDC7Q96M83 1385 aa9.99□□□□□ -0.81
TRIM49B-202ENST00000622138 HSP90AA2PQ14568 343 aaPredicted RBP9.99□□□□□ -0.81
TRIM49B-202ENST00000622138 RPRD2Q5VT52 1461 aaKnown RBP9.99□□□□□ -0.81
TRIM49B-202ENST00000622138 MRC2Q9UBG0 1479 aa9.99□□□□□ -0.81
TRIM49B-202ENST00000622138 AAMPQ13685 434 aa9.98□□□□□ -0.81
TRIM49B-202ENST00000622138 ROCK1Q13464 1354 aa9.98□□□□□ -0.81
TRIM49B-202ENST00000622138 FGD1P98174 961 aa9.98□□□□□ -0.81
TRIM49B-202ENST00000622138 LAS1LQ9Y4W2 734 aaKnown RBP9.97□□□□□ -0.81
TRIM49B-202ENST00000622138 RAPGEF6Q8TEU7 1601 aa9.97□□□□□ -0.81
TRIM49B-202ENST00000622138 PZPP20742 1482 aa9.96□□□□□ -0.82
TRIM49B-202ENST00000622138 SPATA31E1Q6ZUB1 1445 aa9.96□□□□□ -0.82
TRIM49B-202ENST00000622138 RBM10P98175 930 aaKnown RBP9.95□□□□□ -0.82
TRIM49B-202ENST00000622138 PDE4CQ08493 712 aa9.95□□□□□ -0.82
TRIM49B-202ENST00000622138 FRAT1Q92837 279 aaPredicted RBP9.95□□□□□ -0.82
TRIM49B-202ENST00000622138 PRKRIP1Q9H875 184 aaPredicted RBP9.95□□□□□ -0.82
TRIM49B-202ENST00000622138 KIF7Q2M1P5 1343 aa9.94□□□□□ -0.82
TRIM49B-202ENST00000622138 KIAA0586Q9BVV6 1533 aa9.94□□□□□ -0.82
TRIM49B-202ENST00000622138 DDRGK1Q96HY6 314 aa9.94□□□□□ -0.82
TRIM49B-202ENST00000622138 POLR1AO95602 1720 aaPredicted RBP9.94□□□□□ -0.82
TRIM49B-202ENST00000622138 PRG4Q92954 1404 aaPredicted RBP9.94□□□□□ -0.82
TRIM49B-202ENST00000622138 ZBED9Q6R2W3 1325 aa9.94□□□□□ -0.82
TRIM49B-202ENST00000622138 CAMSAP2Q08AD1 1489 aa9.94□□□□□ -0.82
TRIM49B-202ENST00000622138 HSP90AA1P07900 732 aaKnown RBP9.94□□□□□ -0.82
TRIM49B-202ENST00000622138 CENPJQ9HC77 1338 aaPredicted RBP9.93□□□□□ -0.82
TRIM49B-202ENST00000622138 IFT140Q96RY7 1462 aa9.93□□□□□ -0.82
TRIM49B-202ENST00000622138 MBD5Q9P267 1494 aa9.93□□□□□ -0.82
TRIM49B-202ENST00000622138 KIF14Q15058 1648 aa9.93□□□□□ -0.82
TRIM49B-202ENST00000622138 GRIN2AQ12879 1464 aa9.93□□□□□ -0.82
TRIM49B-202ENST00000622138 EIF4G3O43432 1585 aaKnown RBP9.92□□□□□ -0.82
TRIM49B-202ENST00000622138 FAM9BQ8IZU0 186 aa9.92□□□□□ -0.82
TRIM49B-202ENST00000622138 SLC4A1APQ9BWU0 796 aaKnown RBP9.92□□□□□ -0.82
TRIM49B-202ENST00000622138 MRS2Q9HD23 443 aa9.91□□□□□ -0.82
TRIM49B-202ENST00000622138 ADGBQ8N7X0 1667 aa9.91□□□□□ -0.82
TRIM49B-202ENST00000622138 BCORL1Q5H9F3 1711 aa9.91□□□□□ -0.82
TRIM49B-202ENST00000622138 NFKBIBQ15653 356 aa9.91□□□□□ -0.82
TRIM49B-202ENST00000622138 PLB1Q6P1J6 1458 aa9.91□□□□□ -0.82
TRIM49B-202ENST00000622138 CROCC2H7BZ55 1655 aa9.91□□□□□ -0.82
TRIM49B-202ENST00000622138 TROQ12816 1431 aaPredicted RBP9.9□□□□□ -0.82
TRIM49B-202ENST00000622138 TCERG1O14776 1098 aaKnown RBP9.9□□□□□ -0.82
TRIM49B-202ENST00000622138 RNF123Q5XPI4 1314 aa9.9□□□□□ -0.82
TRIM49B-202ENST00000622138 SMG6Q86US8 1419 aaKnown RBP9.9□□□□□ -0.83
TRIM49B-202ENST00000622138 GPATCH8Q9UKJ3 1502 aaKnown RBP9.9□□□□□ -0.83
TRIM49B-202ENST00000622138 CALD1Q05682 793 aaKnown RBP9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms