RNA–Protein interactions for RNA: ENST00000622098.4

CDK16-223, Transcript of cyclin dependent kinase 16, humanhuman

TSL 2 BASIC

Gene CDK16, Length 2,968 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-223ENST00000622098 C11orf95C9JLR9 678 aaPredicted RBP24.6■■□□□ 1.53
CDK16-223ENST00000622098 ANKRD30BQ9BXX2 1392 aa24.6■■□□□ 1.53
CDK16-223ENST00000622098 DISP1Q96F81 1524 aa24.59■■□□□ 1.53
CDK16-223ENST00000622098 KIAA0556O60303 1618 aa24.59■■□□□ 1.53
CDK16-223ENST00000622098 NUP153P49790 1475 aaKnown RBP24.59■■□□□ 1.53
CDK16-223ENST00000622098 KIAA0586Q9BVV6 1533 aa24.58■■□□□ 1.53
CDK16-223ENST00000622098 RPRD2Q5VT52 1461 aaKnown RBP24.58■■□□□ 1.53
CDK16-223ENST00000622098 NBPF8Q3BBV2 869 aa24.57■■□□□ 1.52
CDK16-223ENST00000622098 SLC4A1APQ9BWU0 796 aaKnown RBP24.57■■□□□ 1.52
CDK16-223ENST00000622098 DNMT1P26358 1616 aaKnown RBP24.57■■□□□ 1.52
CDK16-223ENST00000622098 CCDC184Q52MB2 194 aa24.56■■□□□ 1.52
CDK16-223ENST00000622098 CCDC7Q96M83 1385 aa24.56■■□□□ 1.52
CDK16-223ENST00000622098 IFT140Q96RY7 1462 aa24.56■■□□□ 1.52
CDK16-223ENST00000622098 NCOA1Q15788 1441 aa24.56■■□□□ 1.52
CDK16-223ENST00000622098 CDK11AQ9UQ88 783 aaPredicted RBP24.55■■□□□ 1.52
CDK16-223ENST00000622098 RBM19Q9Y4C8 960 aaKnown RBP24.54■■□□□ 1.52
CDK16-223ENST00000622098 TEX14Q8IWB6 1497 aa24.53■■□□□ 1.52
CDK16-223ENST00000622098 ANP32EQ9BTT0 268 aa24.53■■□□□ 1.52
CDK16-223ENST00000622098 IRX6P78412 446 aaPredicted RBP24.53■■□□□ 1.52
CDK16-223ENST00000622098 RAPGEF6Q8TEU7 1601 aa24.52■■□□□ 1.52
CDK16-223ENST00000622098 PRKRIP1Q9H875 184 aaPredicted RBP24.51■■□□□ 1.51
CDK16-223ENST00000622098 GRIN2AQ12879 1464 aa24.48■■□□□ 1.51
CDK16-223ENST00000622098 PRG4Q92954 1404 aaPredicted RBP24.48■■□□□ 1.51
CDK16-223ENST00000622098 FAM9BQ8IZU0 186 aa24.47■■□□□ 1.51
CDK16-223ENST00000622098 CFDP1Q9UEE9 299 aaPredicted RBP24.46■■□□□ 1.51
CDK16-223ENST00000622098 MRS2Q9HD23 443 aa24.46■■□□□ 1.51
CDK16-223ENST00000622098 KIF7Q2M1P5 1343 aa24.45■■□□□ 1.5
CDK16-223ENST00000622098 SPATA31E1Q6ZUB1 1445 aa24.44■■□□□ 1.5
CDK16-223ENST00000622098 TROQ12816 1431 aaPredicted RBP24.43■■□□□ 1.5
CDK16-223ENST00000622098 CAMSAP2Q08AD1 1489 aa24.43■■□□□ 1.5
CDK16-223ENST00000622098 ZNF777Q9ULD5 760 aaPredicted RBP24.43■■□□□ 1.5
CDK16-223ENST00000622098 PZPP20742 1482 aa24.41■■□□□ 1.5
CDK16-223ENST00000622098 EIF4G3O43432 1585 aaKnown RBP24.41■■□□□ 1.5
CDK16-223ENST00000622098 PLB1Q6P1J6 1458 aa24.4■■□□□ 1.5
CDK16-223ENST00000622098 CHMP7Q8WUX9 453 aaPredicted RBP24.37■■□□□ 1.49
CDK16-223ENST00000622098 GPATCH8Q9UKJ3 1502 aaKnown RBP24.37■■□□□ 1.49
CDK16-223ENST00000622098 ZNF326Q5BKZ1 582 aaKnown RBP24.35■■□□□ 1.49
CDK16-223ENST00000622098 FBLN2P98095 1184 aa24.35■■□□□ 1.49
CDK16-223ENST00000622098 ITSN2Q9NZM3 1697 aa24.34■■□□□ 1.49
CDK16-223ENST00000622098 KIF14Q15058 1648 aa24.34■■□□□ 1.49
CDK16-223ENST00000622098 ZBED9Q6R2W3 1325 aa24.33■■□□□ 1.49
CDK16-223ENST00000622098 KIAA1107Q9UPP5 1409 aa24.33■■□□□ 1.48
CDK16-223ENST00000622098 PKD2Q13563 968 aa24.33■■□□□ 1.48
CDK16-223ENST00000622098 POLR1AO95602 1720 aaPredicted RBP24.32■■□□□ 1.48
CDK16-223ENST00000622098 ADGBQ8N7X0 1667 aa24.32■■□□□ 1.48
CDK16-223ENST00000622098 CEP170Q5SW79 1584 aa24.31■■□□□ 1.48
CDK16-223ENST00000622098 CNGB1Q14028 1251 aaPredicted RBP24.3■■□□□ 1.48
CDK16-223ENST00000622098 POLR3GLQ9BT43 218 aa24.3■■□□□ 1.48
CDK16-223ENST00000622098 ANKRD30AQ9BXX3 1397 aa24.29■■□□□ 1.48
CDK16-223ENST00000622098 ERICH6BQ5W0A0 696 aa24.29■■□□□ 1.48
CDK16-223ENST00000622098 ADGRL2O95490 1459 aa24.29■■□□□ 1.48
CDK16-223ENST00000622098 MAGI1Q96QZ7 1491 aaPredicted RBP24.29■■□□□ 1.48
CDK16-223ENST00000622098 MBD5Q9P267 1494 aa24.29■■□□□ 1.48
CDK16-223ENST00000622098 USP47Q96K76 1375 aa24.29■■□□□ 1.48
CDK16-223ENST00000622098 PPP4R2Q9NY27 417 aa24.27■■□□□ 1.48
CDK16-223ENST00000622098 SYNJ2O15056 1496 aa24.27■■□□□ 1.47
CDK16-223ENST00000622098 ADCY10Q96PN6 1610 aa24.26■■□□□ 1.47
CDK16-223ENST00000622098 ANKRD50Q9ULJ7 1429 aa24.26■■□□□ 1.47
CDK16-223ENST00000622098 JPH4Q96JJ6 628 aa24.26■■□□□ 1.47
CDK16-223ENST00000622098 CROCC2H7BZ55 1655 aa24.25■■□□□ 1.47
CDK16-223ENST00000622098 CARMIL2Q6F5E8 1435 aa24.25■■□□□ 1.47
CDK16-223ENST00000622098 ERCC6Q03468 1493 aa24.23■■□□□ 1.47
CDK16-223ENST00000622098 DHX29Q7Z478 1369 aaKnown RBP24.23■■□□□ 1.47
CDK16-223ENST00000622098 BCORL1Q5H9F3 1711 aa24.21■■□□□ 1.47
CDK16-223ENST00000622098 PLEKHD1A6NEE1 506 aa24.21■■□□□ 1.47
CDK16-223ENST00000622098 NUP155O75694 1391 aa24.2■■□□□ 1.46
CDK16-223ENST00000622098 MSH5O43196 834 aa24.18■■□□□ 1.46
CDK16-223ENST00000622098 B4GALNT3Q6L9W6 998 aa24.18■■□□□ 1.46
CDK16-223ENST00000622098 C9orf84Q5VXU9 1444 aa24.17■■□□□ 1.46
CDK16-223ENST00000622098 KDM5CP41229 1560 aa24.16■■□□□ 1.46
CDK16-223ENST00000622098 NUP160Q12769 1436 aa24.16■■□□□ 1.46
CDK16-223ENST00000622098 CDC42BPAQ5VT25 1732 aa24.15■■□□□ 1.46
CDK16-223ENST00000622098 TSPY4P0CV99 314 aa24.13■■□□□ 1.45
CDK16-223ENST00000622098 TSPY10P0CW01 314 aa24.13■■□□□ 1.45
CDK16-223ENST00000622098 CARD11Q9BXL7 1154 aa24.13■■□□□ 1.45
CDK16-223ENST00000622098 FANCIQ9NVI1 1328 aa24.13■■□□□ 1.45
CDK16-223ENST00000622098 ARID4BQ4LE39 1312 aaPredicted RBP24.13■■□□□ 1.45
CDK16-223ENST00000622098 ABCC10Q5T3U5 1492 aa24.12■■□□□ 1.45
CDK16-223ENST00000622098 ATP10BO94823 1461 aa24.12■■□□□ 1.45
CDK16-223ENST00000622098 UHRF1BP1Q6BDS2 1440 aa24.11■■□□□ 1.45
CDK16-223ENST00000622098 KDM2AQ9Y2K7 1162 aa24.11■■□□□ 1.45
CDK16-223ENST00000622098 SHANK2Q9UPX8 1470 aa24.11■■□□□ 1.45
CDK16-223ENST00000622098 RALGAPBQ86X10 1494 aa24.1■■□□□ 1.45
CDK16-223ENST00000622098 ABCA8O94911 1581 aa24.09■■□□□ 1.45
CDK16-223ENST00000622098 HNRNPMP52272 730 aaKnown RBP eCLIP24.09■■□□□ 1.459e-7■■■□□ 18.6
CDK16-223ENST00000622098 SMG6Q86US8 1419 aaKnown RBP24.08■■□□□ 1.44
CDK16-223ENST00000622098 SENP3-EIF4A1A0A087X0R7 540 aa24.08■■□□□ 1.44
CDK16-223ENST00000622098 KIF15Q9NS87 1388 aa24.07■■□□□ 1.44
CDK16-223ENST00000622098 ROCK2O75116 1388 aaKnown RBP24.06■■□□□ 1.44
CDK16-223ENST00000622098 ST20-MTHFSA0A0A6YYL1 179 aa24.05■■□□□ 1.44
CDK16-223ENST00000622098 DCAF11Q8TEB1 546 aa24.05■■□□□ 1.44
CDK16-223ENST00000622098 NUDCQ9Y266 331 aa24.05■■□□□ 1.44
CDK16-223ENST00000622098 ARHGEF12Q9NZN5 1544 aa24.05■■□□□ 1.44
CDK16-223ENST00000622098 TMC1Q8TDI8 760 aa24.04■■□□□ 1.44
CDK16-223ENST00000622098 PNISRQ8TF01 805 aaKnown RBP24.03■■□□□ 1.44
CDK16-223ENST00000622098 KDM5DQ9BY66 1539 aa24.02■■□□□ 1.44
CDK16-223ENST00000622098 PTPRGP23470 1445 aa23.99■■□□□ 1.43
CDK16-223ENST00000622098 ERICH6Q7L0X2 663 aa23.97■■□□□ 1.43
CDK16-223ENST00000622098 ARHGEF5Q12774 1597 aa23.95■■□□□ 1.42
CDK16-223ENST00000622098 RNF123Q5XPI4 1314 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms