RNA–Protein interactions for RNA: ENST00000621861.1

LINC01517-204, Transcript of long intergenic non-protein coding RNA 1517, humanhuman

TSL 5

Gene LINC01517, Length 1,051 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01517-204ENST00000621861 EPRSP07814 1512 aaKnown RBP7.77□□□□□ -1.17
LINC01517-204ENST00000621861 FGD5Q6ZNL6 1462 aa7.76□□□□□ -1.17
LINC01517-204ENST00000621861 SENP3-EIF4A1A0A087X0R7 540 aa7.75□□□□□ -1.17
LINC01517-204ENST00000621861 REM2Q8IYK8 340 aaPredicted RBP7.75□□□□□ -1.17
LINC01517-204ENST00000621861 ZNF335Q9H4Z2 1342 aaPredicted RBP7.75□□□□□ -1.17
LINC01517-204ENST00000621861 ABCC2Q92887 1545 aa7.73□□□□□ -1.17
LINC01517-204ENST00000621861 PITPNM1O00562 1244 aa7.72□□□□□ -1.17
LINC01517-204ENST00000621861 MLECQ14165 292 aa7.72□□□□□ -1.17
LINC01517-204ENST00000621861 ZRANB1Q9UGI0 708 aa7.72□□□□□ -1.17
LINC01517-204ENST00000621861 EVX2Q03828 476 aa7.71□□□□□ -1.18
LINC01517-204ENST00000621861 TRIM52Q96A61 297 aa7.71□□□□□ -1.18
LINC01517-204ENST00000621861 FER1L4A9Z1Z3 1794 aa7.71□□□□□ -1.18
LINC01517-204ENST00000621861 YY1P25490 414 aa7.7□□□□□ -1.18
LINC01517-204ENST00000621861 ADAMTS12P58397 1594 aa7.7□□□□□ -1.18
LINC01517-204ENST00000621861 UHRF1BP1Q6BDS2 1440 aa7.69□□□□□ -1.18
LINC01517-204ENST00000621861 CEBPAP49715 358 aaPredicted RBP7.69□□□□□ -1.18
LINC01517-204ENST00000621861 CD109Q6YHK3 1445 aa7.69□□□□□ -1.18
LINC01517-204ENST00000621861 FXR2P51116 673 aaKnown RBP eCLIP7.68□□□□□ -1.18
LINC01517-204ENST00000621861 SETBP1Q9Y6X0 1596 aa7.67□□□□□ -1.18
LINC01517-204ENST00000621861 ABCA5Q8WWZ7 1642 aa7.67□□□□□ -1.18
LINC01517-204ENST00000621861 RAPGEF3O95398 923 aa7.66□□□□□ -1.18
LINC01517-204ENST00000621861 SLC34A2O95436 690 aa7.66□□□□□ -1.18
LINC01517-204ENST00000621861 PTPRGP23470 1445 aa7.66□□□□□ -1.18
LINC01517-204ENST00000621861 POGZQ7Z3K3 1410 aa7.66□□□□□ -1.18
LINC01517-204ENST00000621861 KIAA0556O60303 1618 aa7.66□□□□□ -1.18
LINC01517-204ENST00000621861 KCNH8Q96L42 1107 aa7.65□□□□□ -1.18
LINC01517-204ENST00000621861 SETD1BQ9UPS6 1966 aaKnown RBP7.65□□□□□ -1.18
LINC01517-204ENST00000621861 TTC37Q6PGP7 1564 aa7.64□□□□□ -1.19
LINC01517-204ENST00000621861 MAGI3Q5TCQ9 1506 aa7.64□□□□□ -1.19
LINC01517-204ENST00000621861 PCDH10Q9P2E7 1040 aa7.63□□□□□ -1.19
LINC01517-204ENST00000621861 TOP2AP11388 1531 aaKnown RBP7.62□□□□□ -1.19
LINC01517-204ENST00000621861 ARAP3Q8WWN8 1544 aa7.62□□□□□ -1.19
LINC01517-204ENST00000621861 FHAD1B1AJZ9 1412 aa7.62□□□□□ -1.19
LINC01517-204ENST00000621861 HAX1O00165 279 aa7.62□□□□□ -1.19
LINC01517-204ENST00000621861 ZBTB12Q9Y330 459 aaPredicted RBP7.62□□□□□ -1.19
LINC01517-204ENST00000621861 RUSC2Q8N2Y8 1516 aa7.62□□□□□ -1.19
LINC01517-204ENST00000621861 NCKAP5LQ9HCH0 1330 aa7.61□□□□□ -1.19
LINC01517-204ENST00000621861 ZCCHC11Q5TAX3 1644 aaKnown RBP7.6□□□□□ -1.19
LINC01517-204ENST00000621861 FANCAO15360 1455 aa7.6□□□□□ -1.19
LINC01517-204ENST00000621861 PTPRKQ15262 1439 aa7.59□□□□□ -1.19
LINC01517-204ENST00000621861 NCOA1Q15788 1441 aa7.59□□□□□ -1.19
LINC01517-204ENST00000621861 CCDC88BA6NC98 1476 aa7.58□□□□□ -1.2
LINC01517-204ENST00000621861 CAMSAP1Q5T5Y3 1602 aa7.56□□□□□ -1.2
LINC01517-204ENST00000621861 WDR7Q9Y4E6 1490 aa7.55□□□□□ -1.2
LINC01517-204ENST00000621861 CUX1P39880 1505 aa7.55□□□□□ -1.2
LINC01517-204ENST00000621861 ABCA10Q8WWZ4 1543 aa7.55□□□□□ -1.2
LINC01517-204ENST00000621861 SIGLEC1Q9BZZ2 1709 aa7.54□□□□□ -1.2
LINC01517-204ENST00000621861 UACAQ9BZF9 1416 aa7.53□□□□□ -1.2
LINC01517-204ENST00000621861 ARHGEF40Q8TER5 1519 aa7.53□□□□□ -1.2
LINC01517-204ENST00000621861 NUTM2BA6NNL0 878 aaPredicted RBP7.53□□□□□ -1.2
LINC01517-204ENST00000621861 NUTM2EB1AL46 878 aaPredicted RBP7.53□□□□□ -1.2
LINC01517-204ENST00000621861 NUTM2DQ5VT03 806 aaPredicted RBP7.53□□□□□ -1.2
LINC01517-204ENST00000621861 NUTM2AQ8IVF1 878 aaPredicted RBP7.53□□□□□ -1.2
LINC01517-204ENST00000621861 TNIKQ9UKE5 1360 aa7.53□□□□□ -1.2
LINC01517-204ENST00000621861 UHRF1BP1LA0JNW5 1464 aa7.53□□□□□ -1.2
LINC01517-204ENST00000621861 KDM5BQ9UGL1 1544 aa7.52□□□□□ -1.2
LINC01517-204ENST00000621861 RAPGEF6Q8TEU7 1601 aa7.52□□□□□ -1.2
LINC01517-204ENST00000621861 SUPT6HQ7KZ85 1726 aaKnown RBP7.52□□□□□ -1.2
LINC01517-204ENST00000621861 RXRBP28702 533 aa7.52□□□□□ -1.21
LINC01517-204ENST00000621861 ALKQ9UM73 1620 aa7.51□□□□□ -1.21
LINC01517-204ENST00000621861 AKNAQ7Z591 1439 aa7.51□□□□□ -1.21
LINC01517-204ENST00000621861 LRP5O75197 1615 aa7.5□□□□□ -1.21
LINC01517-204ENST00000621861 C1QTNF8P60827 252 aa7.5□□□□□ -1.21
LINC01517-204ENST00000621861 CPS1P31327 1500 aa7.5□□□□□ -1.21
LINC01517-204ENST00000621861 LRRC7Q96NW7 1537 aa7.5□□□□□ -1.21
LINC01517-204ENST00000621861 FRMPD1Q5SYB0 1578 aa7.5□□□□□ -1.21
LINC01517-204ENST00000621861 ZNF772Q68DY9 489 aaPredicted RBP7.49□□□□□ -1.21
LINC01517-204ENST00000621861 PHLDB1Q86UU1 1377 aa7.48□□□□□ -1.21
LINC01517-204ENST00000621861 MKRN4PQ13434 485 aaPredicted RBP7.48□□□□□ -1.21
LINC01517-204ENST00000621861 MEX3CQ5U5Q3 659 aaKnown RBP7.48□□□□□ -1.21
LINC01517-204ENST00000621861 CARMIL2Q6F5E8 1435 aa7.48□□□□□ -1.21
LINC01517-204ENST00000621861 PKD2Q13563 968 aa7.47□□□□□ -1.21
LINC01517-204ENST00000621861 C3P01024 1663 aa7.47□□□□□ -1.21
LINC01517-204ENST00000621861 ARHGEF12Q9NZN5 1544 aa7.46□□□□□ -1.22
LINC01517-204ENST00000621861 C19orf67A6NJJ6 358 aa7.45□□□□□ -1.22
LINC01517-204ENST00000621861 PRKAR2AP13861 404 aaKnown RBP7.45□□□□□ -1.22
LINC01517-204ENST00000621861 ERICH3Q5RHP9 1530 aa7.45□□□□□ -1.22
LINC01517-204ENST00000621861 SHANK2Q9UPX8 1470 aa7.44□□□□□ -1.22
LINC01517-204ENST00000621861 SPDYE2BA6NHP3 402 aa7.44□□□□□ -1.22
LINC01517-204ENST00000621861 SPDYE6P0CI01 402 aa7.44□□□□□ -1.22
LINC01517-204ENST00000621861 SPDYE2Q495Y8 402 aa7.44□□□□□ -1.22
LINC01517-204ENST00000621861 ESF1Q9H501 851 aaKnown RBP7.44□□□□□ -1.22
LINC01517-204ENST00000621861 TRAPPC8Q9Y2L5 1435 aa7.43□□□□□ -1.22
LINC01517-204ENST00000621861 ZFYVE16Q7Z3T8 1539 aa7.42□□□□□ -1.22
LINC01517-204ENST00000621861 RICTORQ6R327 1708 aa7.42□□□□□ -1.22
LINC01517-204ENST00000621861 FBXO3Q9UK99 471 aa7.42□□□□□ -1.22
LINC01517-204ENST00000621861 ZNF784Q8NCA9 323 aaPredicted RBP7.41□□□□□ -1.22
LINC01517-204ENST00000621861 EFCAB5A4FU69 1503 aa7.41□□□□□ -1.22
LINC01517-204ENST00000621861 CEP350Q5VT06 3117 aa7.41□□□□□ -1.22
LINC01517-204ENST00000621861 GABBR2O75899 941 aa7.4□□□□□ -1.22
LINC01517-204ENST00000621861 SSUH2Q9Y2M2 353 aa7.4□□□□□ -1.22
LINC01517-204ENST00000621861 ATAD2Q6PL18 1390 aa7.4□□□□□ -1.22
LINC01517-204ENST00000621861 NEO1Q92859 1461 aa7.4□□□□□ -1.22
LINC01517-204ENST00000621861 CDK12Q9NYV4 1490 aaPredicted RBP7.4□□□□□ -1.22
LINC01517-204ENST00000621861 RNF17Q9BXT8 1623 aaKnown RBP7.39□□□□□ -1.23
LINC01517-204ENST00000621861 DENND4BO75064 1496 aaPredicted RBP7.39□□□□□ -1.23
LINC01517-204ENST00000621861 PSDA5PKW4 1024 aaPredicted RBP7.38□□□□□ -1.23
LINC01517-204ENST00000621861 CHADLQ6NUI6 762 aa7.37□□□□□ -1.23
LINC01517-204ENST00000621861 CLEC11AQ9Y240 323 aa7.37□□□□□ -1.23
LINC01517-204ENST00000621861 RGS12O14924 1447 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms