RNA–Protein interactions for RNA: ENST00000621573.1

TARDBP-224, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-224ENST00000621573 SMARCA4P51532 1647 aa14.79□□□□□ -0.04
TARDBP-224ENST00000621573 DPY19L2Q6NUT2 758 aa14.78□□□□□ -0.04
TARDBP-224ENST00000621573 MROH2BQ7Z745 1585 aa14.76□□□□□ -0.05
TARDBP-224ENST00000621573 ATAD2BQ9ULI0 1458 aa14.75□□□□□ -0.05
TARDBP-224ENST00000621573 NCAPD3P42695 1498 aa14.71□□□□□ -0.05
TARDBP-224ENST00000621573 HAP1P54257 671 aaPredicted RBP14.71□□□□□ -0.05
TARDBP-224ENST00000621573 SMARCA2P51531 1590 aa14.71□□□□□ -0.05
TARDBP-224ENST00000621573 TSHZ2Q9NRE2 1034 aa14.69□□□□□ -0.06
TARDBP-224ENST00000621573 RSF1Q96T23 1441 aaPredicted RBP14.66□□□□□ -0.06
TARDBP-224ENST00000621573 BAZ1BQ9UIG0 1483 aaKnown RBP14.64□□□□□ -0.07
TARDBP-224ENST00000621573 L3MBTL3Q96JM7 780 aaPredicted RBP14.64□□□□□ -0.07
TARDBP-224ENST00000621573 BOLA1Q9Y3E2 137 aa14.64□□□□□ -0.07
TARDBP-224ENST00000621573 SLC24A1O60721 1099 aa14.63□□□□□ -0.07
TARDBP-224ENST00000621573 MICALL2Q8IY33 904 aa14.63□□□□□ -0.07
TARDBP-224ENST00000621573 PEG3Q9GZU2 1588 aa14.61□□□□□ -0.07
TARDBP-224ENST00000621573 TMEM121BQ9BXQ6 578 aaPredicted RBP14.61□□□□□ -0.07
TARDBP-224ENST00000621573 POTEB2H3BUK9 544 aa14.6□□□□□ -0.07
TARDBP-224ENST00000621573 HMGXB3Q12766 1538 aa14.6□□□□□ -0.07
TARDBP-224ENST00000621573 G3V3G9 751 aa14.59□□□□□ -0.07
TARDBP-224ENST00000621573 CADPS2Q86UW7 1296 aa14.59□□□□□ -0.07
TARDBP-224ENST00000621573 WIZO95785 1651 aa14.57□□□□□ -0.08
TARDBP-224ENST00000621573 POTEJP0CG39 1038 aa14.56□□□□□ -0.08
TARDBP-224ENST00000621573 SUPT5HO00267 1087 aaKnown RBP14.5□□□□□ -0.09
TARDBP-224ENST00000621573 C3orf67Q6ZVT6 689 aa14.48□□□□□ -0.09
TARDBP-224ENST00000621573 VSIG10Q8N0Z9 540 aa14.48□□□□□ -0.09
TARDBP-224ENST00000621573 NCKAP5LQ9HCH0 1330 aa14.47□□□□□ -0.09
TARDBP-224ENST00000621573 KDM2AQ9Y2K7 1162 aa14.47□□□□□ -0.09
TARDBP-224ENST00000621573 CRISPLD2Q9H0B8 497 aa14.45□□□□□ -0.1
TARDBP-224ENST00000621573 TMEM92Q6UXU6 159 aa14.44□□□□□ -0.1
TARDBP-224ENST00000621573 TOP2AP11388 1531 aaKnown RBP14.44□□□□□ -0.1
TARDBP-224ENST00000621573 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.43□□□□□ -0.1
TARDBP-224ENST00000621573 PDE4AP27815 886 aa14.42□□□□□ -0.1
TARDBP-224ENST00000621573 LHX8Q68G74 356 aa14.41□□□□□ -0.1
TARDBP-224ENST00000621573 GPHNQ9NQX3 736 aaPredicted RBP14.4□□□□□ -0.1
TARDBP-224ENST00000621573 MAMSTRQ6ZN01 415 aa14.39□□□□□ -0.11
TARDBP-224ENST00000621573 TMC2Q8TDI7 906 aa14.39□□□□□ -0.11
TARDBP-224ENST00000621573 LARP6Q9BRS8 491 aaKnown RBP14.39□□□□□ -0.11
TARDBP-224ENST00000621573 SCUBE2Q9NQ36 999 aa14.39□□□□□ -0.11
TARDBP-224ENST00000621573 C2orf72A6NCS6 295 aa14.38□□□□□ -0.11
TARDBP-224ENST00000621573 KIF3CO14782 793 aa14.38□□□□□ -0.11
TARDBP-224ENST00000621573 MFSD10Q14728 455 aa14.35□□□□□ -0.11
TARDBP-224ENST00000621573 NESP48681 1621 aa14.34□□□□□ -0.11
TARDBP-224ENST00000621573 CADPSQ9ULU8 1353 aa14.34□□□□□ -0.11
TARDBP-224ENST00000621573 OTUD5Q96G74 571 aa14.33□□□□□ -0.12
TARDBP-224ENST00000621573 DDX27Q96GQ7 796 aaKnown RBP14.33□□□□□ -0.12
TARDBP-224ENST00000621573 DSG2Q14126 1118 aa14.32□□□□□ -0.12
TARDBP-224ENST00000621573 WDR70Q9NW82 654 aa14.32□□□□□ -0.12
TARDBP-224ENST00000621573 FOXK1P85037 733 aa14.31□□□□□ -0.12
TARDBP-224ENST00000621573 CCDC88BA6NC98 1476 aa14.31□□□□□ -0.12
TARDBP-224ENST00000621573 SLAIN1Q8ND83 568 aa14.3□□□□□ -0.12
TARDBP-224ENST00000621573 ERCC6Q03468 1493 aa14.3□□□□□ -0.12
TARDBP-224ENST00000621573 PPP1R15BQ5SWA1 713 aa14.29□□□□□ -0.12
TARDBP-224ENST00000621573 LAMC3Q9Y6N6 1575 aa14.26□□□□□ -0.13
TARDBP-224ENST00000621573 PDS5BQ9NTI5 1447 aa14.25□□□□□ -0.13
TARDBP-224ENST00000621573 PLPP6Q8IY26 295 aa14.25□□□□□ -0.13
TARDBP-224ENST00000621573 CFTRP13569 1480 aa14.23□□□□□ -0.13
TARDBP-224ENST00000621573 E2F4Q16254 413 aa14.2□□□□□ -0.14
TARDBP-224ENST00000621573 CAMK2BQ13554 666 aa14.19□□□□□ -0.14
TARDBP-224ENST00000621573 KCNV2Q8TDN2 545 aa14.17□□□□□ -0.14
TARDBP-224ENST00000621573 FANCD2Q9BXW9 1451 aa14.15□□□□□ -0.14
TARDBP-224ENST00000621573 EMILIN3Q9NT22 766 aa14.14□□□□□ -0.15
TARDBP-224ENST00000621573 P3H3Q8IVL6 736 aa14.13□□□□□ -0.15
TARDBP-224ENST00000621573 CEP164Q9UPV0 1460 aa14.12□□□□□ -0.15
TARDBP-224ENST00000621573 HOXB3P14651 431 aaPredicted RBP14.11□□□□□ -0.15
TARDBP-224ENST00000621573 SLC34A2O95436 690 aa14.1□□□□□ -0.15
TARDBP-224ENST00000621573 KIF21AQ7Z4S6 1674 aa14.08□□□□□ -0.16
TARDBP-224ENST00000621573 MRC2Q9UBG0 1479 aa14.07□□□□□ -0.16
TARDBP-224ENST00000621573 DOK7Q18PE1 504 aa14.07□□□□□ -0.16
TARDBP-224ENST00000621573 OXER1Q8TDS5 423 aa14.07□□□□□ -0.16
TARDBP-224ENST00000621573 PTCD2Q8WV60 388 aaKnown RBP14.07□□□□□ -0.16
TARDBP-224ENST00000621573 UPF1Q92900 1129 aaKnown RBP eCLIP14.07□□□□□ -0.16
TARDBP-224ENST00000621573 ARHGEF1Q92888 912 aaKnown RBP14.06□□□□□ -0.16
TARDBP-224ENST00000621573 ARIH1Q9Y4X5 557 aaPredicted RBP14.06□□□□□ -0.16
TARDBP-224ENST00000621573 SNPHO15079 494 aa14.05□□□□□ -0.16
TARDBP-224ENST00000621573 CUX2O14529 1486 aa14.05□□□□□ -0.16
TARDBP-224ENST00000621573 DPYSL4O14531 572 aa14.03□□□□□ -0.16
TARDBP-224ENST00000621573 THOC2Q8NI27 1593 aaKnown RBP14.01□□□□□ -0.17
TARDBP-224ENST00000621573 MAP3K9P80192 1104 aa14.01□□□□□ -0.17
TARDBP-224ENST00000621573 PCDHGA4Q9Y5G9 962 aa14.01□□□□□ -0.17
TARDBP-224ENST00000621573 RIMBP2O15034 1052 aa13.99□□□□□ -0.17
TARDBP-224ENST00000621573 ZNF710Q8N1W2 664 aa13.99□□□□□ -0.17
TARDBP-224ENST00000621573 TBC1D12O60347 775 aa13.98□□□□□ -0.17
TARDBP-224ENST00000621573 URB2Q14146 1524 aaKnown RBP13.97□□□□□ -0.17
TARDBP-224ENST00000621573 ZSWIM6Q9HCJ5 1215 aa13.97□□□□□ -0.17
TARDBP-224ENST00000621573 PRDM2Q13029 1718 aa13.97□□□□□ -0.17
TARDBP-224ENST00000621573 WDR62O43379 1518 aa13.96□□□□□ -0.17
TARDBP-224ENST00000621573 GPR153Q6NV75 609 aa13.96□□□□□ -0.17
TARDBP-224ENST00000621573 ARSIQ5FYB1 569 aa13.95□□□□□ -0.18
TARDBP-224ENST00000621573 PDIA6Q15084 440 aa13.94□□□□□ -0.18
TARDBP-224ENST00000621573 KHSRPQ92945 711 aaKnown RBP eCLIP13.94□□□□□ -0.188e-7■□□□□ 11
TARDBP-224ENST00000621573 ABCC8Q09428 1581 aa13.92□□□□□ -0.18
TARDBP-224ENST00000621573 EVI5O60447 810 aa13.92□□□□□ -0.18
TARDBP-224ENST00000621573 TOPBP1Q92547 1522 aa13.91□□□□□ -0.18
TARDBP-224ENST00000621573 KDM4FA0A1W2PPD8 638 aa13.91□□□□□ -0.18
TARDBP-224ENST00000621573 SPDYE16A6NNV3 312 aaPredicted RBP13.91□□□□□ -0.18
TARDBP-224ENST00000621573 NBR1Q14596 966 aa13.9□□□□□ -0.18
TARDBP-224ENST00000621573 ST18O60284 1047 aa13.89□□□□□ -0.19
TARDBP-224ENST00000621573 NUDT7P0C024 238 aa13.89□□□□□ -0.19
TARDBP-224ENST00000621573 HOXB1P14653 301 aaPredicted RBP13.89□□□□□ -0.19
TARDBP-224ENST00000621573 SEMA3EO15041 775 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 193 ms