RNA–Protein interactions for RNA: ENST00000621013.4

SLC39A1-211, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SLC39A1, Length 2,322 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-211ENST00000621013 MRC2Q9UBG0 1479 aa24.23■■□□□ 1.47
SLC39A1-211ENST00000621013 TEX14Q8IWB6 1497 aa24.22■■□□□ 1.47
SLC39A1-211ENST00000621013 CCDC7Q96M83 1385 aa24.22■■□□□ 1.47
SLC39A1-211ENST00000621013 ABCC5O15440 1437 aa24.22■■□□□ 1.47
SLC39A1-211ENST00000621013 KIAA0556O60303 1618 aa24.21■■□□□ 1.47
SLC39A1-211ENST00000621013 KIAA0586Q9BVV6 1533 aa24.19■■□□□ 1.46
SLC39A1-211ENST00000621013 ERICH6BQ5W0A0 696 aa24.18■■□□□ 1.46
SLC39A1-211ENST00000621013 DISP1Q96F81 1524 aa24.18■■□□□ 1.46
SLC39A1-211ENST00000621013 NUP153P49790 1475 aaKnown RBP24.17■■□□□ 1.46
SLC39A1-211ENST00000621013 SPATA31E1Q6ZUB1 1445 aa24.16■■□□□ 1.46
SLC39A1-211ENST00000621013 PRKRIP1Q9H875 184 aaPredicted RBP24.15■■□□□ 1.46
SLC39A1-211ENST00000621013 POLR1AO95602 1720 aaPredicted RBP24.15■■□□□ 1.46
SLC39A1-211ENST00000621013 C11orf95C9JLR9 678 aaPredicted RBP24.15■■□□□ 1.46
SLC39A1-211ENST00000621013 FOXD1Q16676 465 aa24.15■■□□□ 1.46
SLC39A1-211ENST00000621013 RAPGEF6Q8TEU7 1601 aa24.14■■□□□ 1.46
SLC39A1-211ENST00000621013 IFT140Q96RY7 1462 aa24.14■■□□□ 1.46
SLC39A1-211ENST00000621013 NBPF8Q3BBV2 869 aa24.12■■□□□ 1.45
SLC39A1-211ENST00000621013 ARID3CA6NKF2 412 aa24.1■■□□□ 1.45
SLC39A1-211ENST00000621013 CDK11AQ9UQ88 783 aaPredicted RBP24.09■■□□□ 1.45
SLC39A1-211ENST00000621013 CCDC184Q52MB2 194 aa24.09■■□□□ 1.45
SLC39A1-211ENST00000621013 ZNF608Q9ULD9 1512 aaPredicted RBP24.07■■□□□ 1.44
SLC39A1-211ENST00000621013 SLC4A1APQ9BWU0 796 aaKnown RBP24.07■■□□□ 1.44
SLC39A1-211ENST00000621013 PZPP20742 1482 aa24.07■■□□□ 1.44
SLC39A1-211ENST00000621013 ZNF644Q9H582 1327 aaPredicted RBP24.06■■□□□ 1.44
SLC39A1-211ENST00000621013 KIF7Q2M1P5 1343 aa24.06■■□□□ 1.44
SLC39A1-211ENST00000621013 ZBED9Q6R2W3 1325 aa24.06■■□□□ 1.44
SLC39A1-211ENST00000621013 TROQ12816 1431 aaPredicted RBP24.05■■□□□ 1.44
SLC39A1-211ENST00000621013 ADGBQ8N7X0 1667 aa24.04■■□□□ 1.44
SLC39A1-211ENST00000621013 ITSN2Q9NZM3 1697 aa24.04■■□□□ 1.44
SLC39A1-211ENST00000621013 GRIN2AQ12879 1464 aa24.04■■□□□ 1.44
SLC39A1-211ENST00000621013 MBD5Q9P267 1494 aa24.04■■□□□ 1.44
SLC39A1-211ENST00000621013 CAMSAP2Q08AD1 1489 aa24.03■■□□□ 1.44
SLC39A1-211ENST00000621013 ADGRL2O95490 1459 aa24.03■■□□□ 1.44
SLC39A1-211ENST00000621013 MRS2Q9HD23 443 aa24.02■■□□□ 1.44
SLC39A1-211ENST00000621013 PPP4R2Q9NY27 417 aa24.01■■□□□ 1.43
SLC39A1-211ENST00000621013 ADCY10Q96PN6 1610 aa24■■□□□ 1.43
SLC39A1-211ENST00000621013 IRX6P78412 446 aaPredicted RBP24■■□□□ 1.43
SLC39A1-211ENST00000621013 FANCIQ9NVI1 1328 aa23.99■■□□□ 1.43
SLC39A1-211ENST00000621013 KIAA1107Q9UPP5 1409 aa23.98■■□□□ 1.43
SLC39A1-211ENST00000621013 CROCC2H7BZ55 1655 aa23.98■■□□□ 1.43
SLC39A1-211ENST00000621013 PRG4Q92954 1404 aaPredicted RBP23.97■■□□□ 1.43
SLC39A1-211ENST00000621013 FAM9BQ8IZU0 186 aa23.97■■□□□ 1.43
SLC39A1-211ENST00000621013 GPATCH8Q9UKJ3 1502 aaKnown RBP23.97■■□□□ 1.43
SLC39A1-211ENST00000621013 EIF4G3O43432 1585 aaKnown RBP23.95■■□□□ 1.42
SLC39A1-211ENST00000621013 CFDP1Q9UEE9 299 aaPredicted RBP23.94■■□□□ 1.42
SLC39A1-211ENST00000621013 KIF14Q15058 1648 aa23.93■■□□□ 1.42
SLC39A1-211ENST00000621013 DHX29Q7Z478 1369 aaKnown RBP23.92■■□□□ 1.42
SLC39A1-211ENST00000621013 ARID4BQ4LE39 1312 aaPredicted RBP23.92■■□□□ 1.42
SLC39A1-211ENST00000621013 MAGI1Q96QZ7 1491 aaPredicted RBP23.9■■□□□ 1.42
SLC39A1-211ENST00000621013 ANKRD30AQ9BXX3 1397 aa23.89■■□□□ 1.42
SLC39A1-211ENST00000621013 MSH5O43196 834 aa23.89■■□□□ 1.42
SLC39A1-211ENST00000621013 USP47Q96K76 1375 aa23.88■■□□□ 1.41
SLC39A1-211ENST00000621013 KDM5CP41229 1560 aa23.88■■□□□ 1.41
SLC39A1-211ENST00000621013 PLB1Q6P1J6 1458 aa23.88■■□□□ 1.41
SLC39A1-211ENST00000621013 BCORL1Q5H9F3 1711 aa23.87■■□□□ 1.41
SLC39A1-211ENST00000621013 UHRF1BP1Q6BDS2 1440 aa23.87■■□□□ 1.41
SLC39A1-211ENST00000621013 CEP170Q5SW79 1584 aa23.86■■□□□ 1.41
SLC39A1-211ENST00000621013 SMG6Q86US8 1419 aaKnown RBP23.85■■□□□ 1.41
SLC39A1-211ENST00000621013 SHANK2Q9UPX8 1470 aa23.85■■□□□ 1.41
SLC39A1-211ENST00000621013 ANKRD50Q9ULJ7 1429 aa23.84■■□□□ 1.41
SLC39A1-211ENST00000621013 SYNJ2O15056 1496 aa23.83■■□□□ 1.41
SLC39A1-211ENST00000621013 PKD2Q13563 968 aa23.83■■□□□ 1.41
SLC39A1-211ENST00000621013 RALGAPBQ86X10 1494 aa23.82■■□□□ 1.4
SLC39A1-211ENST00000621013 ARHGEF12Q9NZN5 1544 aa23.82■■□□□ 1.4
SLC39A1-211ENST00000621013 ROCK2O75116 1388 aaKnown RBP23.81■■□□□ 1.4
SLC39A1-211ENST00000621013 CARMIL2Q6F5E8 1435 aa23.81■■□□□ 1.4
SLC39A1-211ENST00000621013 KDM5DQ9BY66 1539 aa23.81■■□□□ 1.4
SLC39A1-211ENST00000621013 ZNF777Q9ULD5 760 aaPredicted RBP23.78■■□□□ 1.4
SLC39A1-211ENST00000621013 CDC42BPAQ5VT25 1732 aa23.78■■□□□ 1.4
SLC39A1-211ENST00000621013 NUP160Q12769 1436 aa23.77■■□□□ 1.4
SLC39A1-211ENST00000621013 ABCC10Q5T3U5 1492 aa23.77■■□□□ 1.4
SLC39A1-211ENST00000621013 RNF123Q5XPI4 1314 aa23.76■■□□□ 1.39
SLC39A1-211ENST00000621013 B4GALNT3Q6L9W6 998 aa23.75■■□□□ 1.39
SLC39A1-211ENST00000621013 CHMP7Q8WUX9 453 aaPredicted RBP23.75■■□□□ 1.39
SLC39A1-211ENST00000621013 C9orf84Q5VXU9 1444 aa23.75■■□□□ 1.39
SLC39A1-211ENST00000621013 ABCA8O94911 1581 aa23.75■■□□□ 1.39
SLC39A1-211ENST00000621013 NUDCQ9Y266 331 aa23.75■■□□□ 1.39
SLC39A1-211ENST00000621013 NUP155O75694 1391 aa23.72■■□□□ 1.39
SLC39A1-211ENST00000621013 ZNF326Q5BKZ1 582 aaKnown RBP23.72■■□□□ 1.39
SLC39A1-211ENST00000621013 PTPRGP23470 1445 aa23.71■■□□□ 1.39
SLC39A1-211ENST00000621013 JPH4Q96JJ6 628 aa23.7■■□□□ 1.38
SLC39A1-211ENST00000621013 PLEKHD1A6NEE1 506 aa23.7■■□□□ 1.38
SLC39A1-211ENST00000621013 PNISRQ8TF01 805 aaKnown RBP23.68■■□□□ 1.38
SLC39A1-211ENST00000621013 ARHGEF5Q12774 1597 aa23.68■■□□□ 1.38
SLC39A1-211ENST00000621013 KTN1Q86UP2 1357 aaKnown RBP23.68■■□□□ 1.38
SLC39A1-211ENST00000621013 KIF15Q9NS87 1388 aa23.68■■□□□ 1.38
SLC39A1-211ENST00000621013 ATP10BO94823 1461 aa23.68■■□□□ 1.38
SLC39A1-211ENST00000621013 CARD11Q9BXL7 1154 aa23.66■■□□□ 1.38
SLC39A1-211ENST00000621013 ERICH6Q7L0X2 663 aa23.65■■□□□ 1.38
SLC39A1-211ENST00000621013 POLR3GLQ9BT43 218 aa23.65■■□□□ 1.38
SLC39A1-211ENST00000621013 ERCC6Q03468 1493 aa23.64■■□□□ 1.37
SLC39A1-211ENST00000621013 LRPPRCP42704 1394 aaKnown RBP23.64■■□□□ 1.37
SLC39A1-211ENST00000621013 E9PCH4 1651 aa23.63■■□□□ 1.37
SLC39A1-211ENST00000621013 TSPY4P0CV99 314 aa23.62■■□□□ 1.37
SLC39A1-211ENST00000621013 TSPY10P0CW01 314 aa23.62■■□□□ 1.37
SLC39A1-211ENST00000621013 BRD4O60885 1362 aaPredicted RBP23.62■■□□□ 1.37
SLC39A1-211ENST00000621013 TMC1Q8TDI8 760 aa23.61■■□□□ 1.37
SLC39A1-211ENST00000621013 RALBP1Q15311 655 aa23.59■■□□□ 1.37
SLC39A1-211ENST00000621013 MYBBP1AQ9BQG0 1328 aaKnown RBP23.58■■□□□ 1.37
SLC39A1-211ENST00000621013 ST20-MTHFSA0A0A6YYL1 179 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms