RNA–Protein interactions for RNA: ENST00000620770.1

MUC1-229, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-229ENST00000620770 PPARGC1BQ86YN6 1023 aaKnown RBP21.05■□□□□ 0.96
MUC1-229ENST00000620770 SUPT6HQ7KZ85 1726 aaKnown RBP21.04■□□□□ 0.96
MUC1-229ENST00000620770 MYO5CQ9NQX4 1742 aa21.04■□□□□ 0.96
MUC1-229ENST00000620770 NCOA2Q15596 1464 aa21.03■□□□□ 0.96
MUC1-229ENST00000620770 ARHGEF40Q8TER5 1519 aa21.02■□□□□ 0.96
MUC1-229ENST00000620770 CCNB3Q8WWL7 1395 aa21.01■□□□□ 0.95
MUC1-229ENST00000620770 RAPGEF3O95398 923 aa21.01■□□□□ 0.95
MUC1-229ENST00000620770 AKNAQ7Z591 1439 aa21.01■□□□□ 0.95
MUC1-229ENST00000620770 DENND4BO75064 1496 aaPredicted RBP21.01■□□□□ 0.95
MUC1-229ENST00000620770 ARHGAP5Q13017 1502 aa20.99■□□□□ 0.95
MUC1-229ENST00000620770 PREX2Q70Z35 1606 aa20.97■□□□□ 0.95
MUC1-229ENST00000620770 PLCH2O75038 1416 aa20.97■□□□□ 0.95
MUC1-229ENST00000620770 ZMYM4Q5VZL5 1548 aa20.97■□□□□ 0.95
MUC1-229ENST00000620770 CDC42BPAQ5VT25 1732 aa20.96■□□□□ 0.95
MUC1-229ENST00000620770 GPATCH8Q9UKJ3 1502 aaKnown RBP20.95■□□□□ 0.94
MUC1-229ENST00000620770 ADAMTSL3P82987 1691 aa20.95■□□□□ 0.94
MUC1-229ENST00000620770 BCORL1Q5H9F3 1711 aa20.95■□□□□ 0.94
MUC1-229ENST00000620770 CDC42BPBQ9Y5S2 1711 aa20.93■□□□□ 0.94
MUC1-229ENST00000620770 HECW2Q9P2P5 1572 aa20.93■□□□□ 0.94
MUC1-229ENST00000620770 ITSN2Q9NZM3 1697 aa20.93■□□□□ 0.94
MUC1-229ENST00000620770 ZNF777Q9ULD5 760 aaPredicted RBP20.92■□□□□ 0.94
MUC1-229ENST00000620770 ZFYVE16Q7Z3T8 1539 aa20.92■□□□□ 0.94
MUC1-229ENST00000620770 EFCAB2Q5VUJ9 269 aa20.91■□□□□ 0.94
MUC1-229ENST00000620770 CFDP1Q9UEE9 299 aaPredicted RBP20.91■□□□□ 0.94
MUC1-229ENST00000620770 POGZQ7Z3K3 1410 aa20.89■□□□□ 0.94
MUC1-229ENST00000620770 MAGI2Q86UL8 1455 aa20.88■□□□□ 0.93
MUC1-229ENST00000620770 MYOM3Q5VTT5 1437 aa20.88■□□□□ 0.93
MUC1-229ENST00000620770 MADDQ8WXG6 1647 aa20.88■□□□□ 0.93
MUC1-229ENST00000620770 SCAPERQ9BY12 1400 aa20.87■□□□□ 0.93
MUC1-229ENST00000620770 ARID4BQ4LE39 1312 aaPredicted RBP20.86■□□□□ 0.93
MUC1-229ENST00000620770 SAMD9LQ8IVG5 1584 aa20.85■□□□□ 0.93
MUC1-229ENST00000620770 PTPRMP28827 1452 aa20.84■□□□□ 0.93
MUC1-229ENST00000620770 ZNF644Q9H582 1327 aaPredicted RBP20.83■□□□□ 0.93
MUC1-229ENST00000620770 RIMS1Q86UR5 1692 aaKnown RBP20.83■□□□□ 0.92
MUC1-229ENST00000620770 YEATS2Q9ULM3 1422 aa20.82■□□□□ 0.92
MUC1-229ENST00000620770 ABCC1P33527 1531 aa20.82■□□□□ 0.92
MUC1-229ENST00000620770 SIGLEC1Q9BZZ2 1709 aa20.81■□□□□ 0.92
MUC1-229ENST00000620770 CAMSAP2Q08AD1 1489 aa20.81■□□□□ 0.92
MUC1-229ENST00000620770 ZNF518AQ6AHZ1 1483 aa20.81■□□□□ 0.92
MUC1-229ENST00000620770 FGD6Q6ZV73 1430 aa20.8■□□□□ 0.92
MUC1-229ENST00000620770 SYCP2Q9BX26 1530 aa20.8■□□□□ 0.92
MUC1-229ENST00000620770 KDM5CP41229 1560 aa20.79■□□□□ 0.92
MUC1-229ENST00000620770 MIA2Q96PC5 1412 aa20.78■□□□□ 0.92
MUC1-229ENST00000620770 FER1L4A9Z1Z3 1794 aa20.78■□□□□ 0.92
MUC1-229ENST00000620770 ARHGEF12Q9NZN5 1544 aa20.78■□□□□ 0.92
MUC1-229ENST00000620770 PLEKHH2Q8IVE3 1493 aa20.77■□□□□ 0.92
MUC1-229ENST00000620770 PTPN23Q9H3S7 1636 aa20.77■□□□□ 0.92
MUC1-229ENST00000620770 HNRNPMP52272 730 aaKnown RBP eCLIP20.76■□□□□ 0.91
MUC1-229ENST00000620770 C9orf84Q5VXU9 1444 aa20.75■□□□□ 0.91
MUC1-229ENST00000620770 TRAPPC8Q9Y2L5 1435 aa20.74■□□□□ 0.91
MUC1-229ENST00000620770 ATP10AO60312 1499 aa20.74■□□□□ 0.91
MUC1-229ENST00000620770 KIAA1107Q9UPP5 1409 aa20.73■□□□□ 0.91
MUC1-229ENST00000620770 FAM50AQ14320 339 aaKnown RBP20.73■□□□□ 0.91
MUC1-229ENST00000620770 AFAP1Q8N556 730 aa20.72■□□□□ 0.91
MUC1-229ENST00000620770 TCOF1Q13428 1488 aaKnown RBP20.7■□□□□ 0.9
MUC1-229ENST00000620770 DIP2CQ9Y2E4 1556 aa20.7■□□□□ 0.9
MUC1-229ENST00000620770 ABCA6Q8N139 1617 aa20.69■□□□□ 0.9
MUC1-229ENST00000620770 MYT1LQ9UL68 1186 aa20.69■□□□□ 0.9
MUC1-229ENST00000620770 MBD5Q9P267 1494 aa20.69■□□□□ 0.9
MUC1-229ENST00000620770 REREQ9P2R6 1566 aa20.68■□□□□ 0.9
MUC1-229ENST00000620770 CCDC141Q6ZP82 1450 aa20.68■□□□□ 0.9
MUC1-229ENST00000620770 MLH3Q9UHC1 1453 aa20.66■□□□□ 0.9
MUC1-229ENST00000620770 ARHGEF5Q12774 1597 aa20.65■□□□□ 0.9
MUC1-229ENST00000620770 LMTK3Q96Q04 1460 aa20.63■□□□□ 0.89
MUC1-229ENST00000620770 RRBP1Q9P2E9 1410 aaKnown RBP20.63■□□□□ 0.89
MUC1-229ENST00000620770 SPAG9O60271 1321 aaKnown RBP20.63■□□□□ 0.89
MUC1-229ENST00000620770 MLECQ14165 292 aa20.63■□□□□ 0.89
MUC1-229ENST00000620770 KIDINS220Q9ULH0 1771 aa20.63■□□□□ 0.89
MUC1-229ENST00000620770 DNMT1P26358 1616 aaKnown RBP20.61■□□□□ 0.89
MUC1-229ENST00000620770 ITGAEP38570 1179 aa20.61■□□□□ 0.89
MUC1-229ENST00000620770 DAPK1P53355 1430 aa20.61■□□□□ 0.89
MUC1-229ENST00000620770 ABCC5O15440 1437 aa20.6■□□□□ 0.89
MUC1-229ENST00000620770 ATP7AQ04656 1500 aa20.59■□□□□ 0.89
MUC1-229ENST00000620770 RSPH4AQ5TD94 716 aa20.59■□□□□ 0.89
MUC1-229ENST00000620770 INO80Q9ULG1 1556 aaPredicted RBP20.59■□□□□ 0.89
MUC1-229ENST00000620770 CROCC2H7BZ55 1655 aa20.58■□□□□ 0.89
MUC1-229ENST00000620770 TSPY4P0CV99 314 aa20.58■□□□□ 0.89
MUC1-229ENST00000620770 TSPY10P0CW01 314 aa20.58■□□□□ 0.89
MUC1-229ENST00000620770 AGLP35573 1532 aa20.58■□□□□ 0.88
MUC1-229ENST00000620770 PLPPR3Q6T4P5 718 aa20.57■□□□□ 0.88
MUC1-229ENST00000620770 PREX1Q8TCU6 1659 aa20.57■□□□□ 0.88
MUC1-229ENST00000620770 CHIC2Q9UKJ5 165 aa20.55■□□□□ 0.88
MUC1-229ENST00000620770 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.55■□□□□ 0.88
MUC1-229ENST00000620770 SHANK2Q9UPX8 1470 aa20.55■□□□□ 0.88
MUC1-229ENST00000620770 MAST1Q9Y2H9 1570 aa20.53■□□□□ 0.88
MUC1-229ENST00000620770 RTEL1-TNFRSF6BF6WH68 1400 aa20.52■□□□□ 0.87
MUC1-229ENST00000620770 PTPRKQ15262 1439 aa20.51■□□□□ 0.87
MUC1-229ENST00000620770 C3P01024 1663 aa20.51■□□□□ 0.87
MUC1-229ENST00000620770 ADGBQ8N7X0 1667 aa20.48■□□□□ 0.87
MUC1-229ENST00000620770 SETD1BQ9UPS6 1966 aaKnown RBP20.47■□□□□ 0.87
MUC1-229ENST00000620770 PLXNC1O60486 1568 aa20.46■□□□□ 0.87
MUC1-229ENST00000620770 MROH2AA6NES4 1674 aa20.46■□□□□ 0.87
MUC1-229ENST00000620770 RRP7BPQ9NSQ0 103 aa20.46■□□□□ 0.87
MUC1-229ENST00000620770 ANKRD30AQ9BXX3 1397 aa20.46■□□□□ 0.87
MUC1-229ENST00000620770 A2MP01023 1474 aa20.45■□□□□ 0.86
MUC1-229ENST00000620770 ILDR1Q86SU0 546 aaPredicted RBP20.45■□□□□ 0.86
MUC1-229ENST00000620770 ESF1Q9H501 851 aaKnown RBP20.45■□□□□ 0.86
MUC1-229ENST00000620770 KIF15Q9NS87 1388 aa20.45■□□□□ 0.86
MUC1-229ENST00000620770 CNTLNQ9NXG0 1405 aa20.44■□□□□ 0.86
MUC1-229ENST00000620770 ADGRL2O95490 1459 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms