RNA–Protein interactions for RNA: ENST00000620694.1

THSD4-207, Transcript of thrombospondin type 1 domain containing 4, humanhuman

TSL 3

Gene THSD4, Length 416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-207ENST00000620694 PREX2Q70Z35 1606 aa38.35■■■■□ 3.73
THSD4-207ENST00000620694 CCNB3Q8WWL7 1395 aa38.34■■■■□ 3.73
THSD4-207ENST00000620694 MAP3K1Q13233 1512 aa38.34■■■■□ 3.73
THSD4-207ENST00000620694 APLP2Q06481 763 aa38.34■■■■□ 3.73
THSD4-207ENST00000620694 GPATCH8Q9UKJ3 1502 aaKnown RBP38.33■■■■□ 3.73
THSD4-207ENST00000620694 CDC42BPBQ9Y5S2 1711 aa38.3■■■■□ 3.72
THSD4-207ENST00000620694 FRMPD1Q5SYB0 1578 aa38.3■■■■□ 3.72
THSD4-207ENST00000620694 LRRC9Q6ZRR7 1453 aa38.29■■■■□ 3.72
THSD4-207ENST00000620694 CDC42BPAQ5VT25 1732 aa38.28■■■■□ 3.72
THSD4-207ENST00000620694 CFDP1Q9UEE9 299 aaPredicted RBP38.25■■■■□ 3.71
THSD4-207ENST00000620694 POGZQ7Z3K3 1410 aa38.24■■■■□ 3.71
THSD4-207ENST00000620694 KANK4Q5T7N3 995 aaPredicted RBP38.24■■■■□ 3.71
THSD4-207ENST00000620694 ZNF777Q9ULD5 760 aaPredicted RBP38.24■■■■□ 3.71
THSD4-207ENST00000620694 RICTORQ6R327 1708 aa38.24■■■■□ 3.71
THSD4-207ENST00000620694 NCOA2Q15596 1464 aa38.22■■■■□ 3.71
THSD4-207ENST00000620694 SUPT6HQ7KZ85 1726 aaKnown RBP38.22■■■■□ 3.71
THSD4-207ENST00000620694 ABCC1P33527 1531 aa38.16■■■■□ 3.7
THSD4-207ENST00000620694 ZMYM4Q5VZL5 1548 aa38.15■■■■□ 3.7
THSD4-207ENST00000620694 ZNF518AQ6AHZ1 1483 aa38.15■■■■□ 3.7
THSD4-207ENST00000620694 AFAP1Q8N556 730 aa38.12■■■■□ 3.69
THSD4-207ENST00000620694 ITSN2Q9NZM3 1697 aa38.11■■■■□ 3.69
THSD4-207ENST00000620694 SAMD9LQ8IVG5 1584 aa38.11■■■■□ 3.69
THSD4-207ENST00000620694 ARHGEF12Q9NZN5 1544 aa38.11■■■■□ 3.69
THSD4-207ENST00000620694 MAGI2Q86UL8 1455 aa38.1■■■■□ 3.69
THSD4-207ENST00000620694 PLEKHH2Q8IVE3 1493 aa38.08■■■■□ 3.69
THSD4-207ENST00000620694 TRAPPC8Q9Y2L5 1435 aa38.07■■■■□ 3.69
THSD4-207ENST00000620694 ZFYVE16Q7Z3T8 1539 aa38.07■■■■□ 3.68
THSD4-207ENST00000620694 ARHGEF40Q8TER5 1519 aa38.06■■■■□ 3.68
THSD4-207ENST00000620694 KIAA1107Q9UPP5 1409 aa38.04■■■■□ 3.68
THSD4-207ENST00000620694 HNRNPMP52272 730 aaKnown RBP eCLIP38.04■■■■□ 3.68
THSD4-207ENST00000620694 MYT1LQ9UL68 1186 aa38.04■■■■□ 3.68
THSD4-207ENST00000620694 YEATS2Q9ULM3 1422 aa38.04■■■■□ 3.68
THSD4-207ENST00000620694 SYCP2Q9BX26 1530 aa38.03■■■■□ 3.68
THSD4-207ENST00000620694 KDM5CP41229 1560 aa38.03■■■■□ 3.68
THSD4-207ENST00000620694 KDM4FA0A1W2PPD8 638 aa38.03■■■■□ 3.68
THSD4-207ENST00000620694 ZNF644Q9H582 1327 aaPredicted RBP38.02■■■■□ 3.68
THSD4-207ENST00000620694 AEBP2Q6ZN18 517 aaPredicted RBP38■■■■□ 3.67
THSD4-207ENST00000620694 ARID4BQ4LE39 1312 aaPredicted RBP37.95■■■■□ 3.67
THSD4-207ENST00000620694 MLH3Q9UHC1 1453 aa37.95■■■■□ 3.67
THSD4-207ENST00000620694 HECW2Q9P2P5 1572 aa37.93■■■■□ 3.66
THSD4-207ENST00000620694 MYOM3Q5VTT5 1437 aa37.92■■■■□ 3.66
THSD4-207ENST00000620694 ATP10AO60312 1499 aa37.9■■■■□ 3.66
THSD4-207ENST00000620694 CAMSAP2Q08AD1 1489 aa37.9■■■■□ 3.66
THSD4-207ENST00000620694 SPAG9O60271 1321 aaKnown RBP37.89■■■■□ 3.66
THSD4-207ENST00000620694 MBD5Q9P267 1494 aa37.87■■■■□ 3.65
THSD4-207ENST00000620694 MIA2Q96PC5 1412 aa37.87■■■■□ 3.65
THSD4-207ENST00000620694 C9orf84Q5VXU9 1444 aa37.86■■■■□ 3.65
THSD4-207ENST00000620694 RSPH4AQ5TD94 716 aa37.81■■■■□ 3.64
THSD4-207ENST00000620694 DIP2CQ9Y2E4 1556 aa37.8■■■■□ 3.64
THSD4-207ENST00000620694 ABCA6Q8N139 1617 aa37.78■■■■□ 3.64
THSD4-207ENST00000620694 KIDINS220Q9ULH0 1771 aa37.78■■■■□ 3.64
THSD4-207ENST00000620694 CCDC141Q6ZP82 1450 aa37.77■■■■□ 3.64
THSD4-207ENST00000620694 ATP7AQ04656 1500 aa37.75■■■■□ 3.63
THSD4-207ENST00000620694 BCORL1Q5H9F3 1711 aa37.72■■■■□ 3.63
THSD4-207ENST00000620694 INO80Q9ULG1 1556 aaPredicted RBP37.72■■■■□ 3.63
THSD4-207ENST00000620694 SIGLEC1Q9BZZ2 1709 aa37.71■■■■□ 3.63
THSD4-207ENST00000620694 FGD6Q6ZV73 1430 aa37.7■■■■□ 3.63
THSD4-207ENST00000620694 MLECQ14165 292 aa37.7■■■■□ 3.63
THSD4-207ENST00000620694 ARHGEF5Q12774 1597 aa37.7■■■■□ 3.63
THSD4-207ENST00000620694 REREQ9P2R6 1566 aa37.7■■■■□ 3.63
THSD4-207ENST00000620694 TSPY4P0CV99 314 aa37.69■■■■□ 3.62
THSD4-207ENST00000620694 TSPY10P0CW01 314 aa37.69■■■■□ 3.62
THSD4-207ENST00000620694 RTEL1-TNFRSF6BF6WH68 1400 aa37.69■■■■□ 3.62
THSD4-207ENST00000620694 ADAMTSL3P82987 1691 aa37.67■■■■□ 3.62
THSD4-207ENST00000620694 PPARGC1BQ86YN6 1023 aaKnown RBP37.66■■■■□ 3.62
THSD4-207ENST00000620694 PTPN23Q9H3S7 1636 aa37.65■■■■□ 3.62
THSD4-207ENST00000620694 AGLP35573 1532 aa37.61■■■■□ 3.61
THSD4-207ENST00000620694 TCOF1Q13428 1488 aaKnown RBP37.6■■■■□ 3.61
THSD4-207ENST00000620694 A2MP01023 1474 aa37.59■■■■□ 3.61
THSD4-207ENST00000620694 MADDQ8WXG6 1647 aa37.58■■■■□ 3.61
THSD4-207ENST00000620694 PTPRMP28827 1452 aa37.52■■■■□ 3.6
THSD4-207ENST00000620694 FAM50AQ14320 339 aaKnown RBP37.51■■■■□ 3.6
THSD4-207ENST00000620694 ADGBQ8N7X0 1667 aa37.5■■■■□ 3.59
THSD4-207ENST00000620694 ABCC5O15440 1437 aa37.5■■■■□ 3.59
THSD4-207ENST00000620694 PLXNC1O60486 1568 aa37.5■■■■□ 3.59
THSD4-207ENST00000620694 MAST1Q9Y2H9 1570 aa37.5■■■■□ 3.59
THSD4-207ENST00000620694 DHX29Q7Z478 1369 aaKnown RBP37.48■■■■□ 3.59
THSD4-207ENST00000620694 DAPK1P53355 1430 aa37.47■■■■□ 3.59
THSD4-207ENST00000620694 RIMS1Q86UR5 1692 aaKnown RBP37.46■■■■□ 3.59
THSD4-207ENST00000620694 SHANK2Q9UPX8 1470 aa37.44■■■■□ 3.58
THSD4-207ENST00000620694 DNMT1P26358 1616 aaKnown RBP37.43■■■■□ 3.58
THSD4-207ENST00000620694 FER1L4A9Z1Z3 1794 aa37.42■■■■□ 3.58
THSD4-207ENST00000620694 ESF1Q9H501 851 aaKnown RBP37.42■■■■□ 3.58
THSD4-207ENST00000620694 GGT6Q6P531 493 aa37.38■■■■□ 3.57
THSD4-207ENST00000620694 PLPPR3Q6T4P5 718 aa37.38■■■■□ 3.57
THSD4-207ENST00000620694 CROCC2H7BZ55 1655 aa37.37■■■■□ 3.57
THSD4-207ENST00000620694 KIF3BO15066 747 aa37.35■■■■□ 3.57
THSD4-207ENST00000620694 CHIC2Q9UKJ5 165 aa37.34■■■■□ 3.57
THSD4-207ENST00000620694 RRP7BPQ9NSQ0 103 aa37.31■■■■□ 3.56
THSD4-207ENST00000620694 KIF15Q9NS87 1388 aa37.3■■■■□ 3.56
THSD4-207ENST00000620694 CNTLNQ9NXG0 1405 aa37.3■■■■□ 3.56
THSD4-207ENST00000620694 ANKRD30AQ9BXX3 1397 aa37.29■■■■□ 3.56
THSD4-207ENST00000620694 PPP6R1Q9UPN7 881 aa37.27■■■■□ 3.56
THSD4-207ENST00000620694 DUOX2Q9NRD8 1548 aa37.26■■■■□ 3.56
THSD4-207ENST00000620694 CEBPAP49715 358 aaPredicted RBP37.26■■■■□ 3.56
THSD4-207ENST00000620694 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.25■■■■□ 3.55
THSD4-207ENST00000620694 NCOA1Q15788 1441 aa37.21■■■■□ 3.55
THSD4-207ENST00000620694 ADGRL2O95490 1459 aa37.2■■■■□ 3.54
THSD4-207ENST00000620694 RRBP1Q9P2E9 1410 aaKnown RBP37.19■■■■□ 3.54
THSD4-207ENST00000620694 ITGAEP38570 1179 aa37.17■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms